EY684869

Overview
NameEY684869
Unique NameEY684869
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684869 vs. ExPASy Swiss-Prot
Match: NAC3_RAT (Sodium/calcium exchanger 3 OS=Rattus norvegicus GN=Slc8a3 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.644e-20
Identity = 47/112 (41.96%), Postives = 66/112 (58.93%), Query Frame = 1
Query:  205 LLVPWRVLFAFVPPYHIAHGWIAFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDTAY 540
            L V W+VLFA VPP    HGW  F+ S++ I  +  I+  L     C  G+   V A   +A GTS PD  ASK AA + + AD++I N+T SN+VN+++GIG+ W +   Y
Sbjct:  735 LTVFWKVLFACVPPTEYCHGWACFVVSILIIGMLTAIIGDLASHFGCTIGLKDSVTAVVFVAFGTSVPDTFASKAAALQDVYADASIGNVTGSNAVNVFLGIGLAWSVAAIY 846          
BLAST of EY684869 vs. ExPASy Swiss-Prot
Match: NAC1_RAT (Sodium/calcium exchanger 1 OS=Rattus norvegicus GN=Slc8a1 PE=2 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 1.926e-19
Identity = 48/113 (42.48%), Postives = 67/113 (59.29%), Query Frame = 1
Query:  205 LLVPWRVLFAFVPPYHIAHGWIAFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDTAYN 543
            L V W+VLFAFVPP    +GW  FI S++ I  +   +  L     C  G+   V A   +A GTS PD  ASK+AA +   AD++I N+T SN+VN+++GIG+ W I   Y+
Sbjct:  779 LTVFWKVLFAFVPPTEYWNGWACFIVSILMIGLLTAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYH 891          
BLAST of EY684869 vs. ExPASy Swiss-Prot
Match: NAC1_MOUSE (Sodium/calcium exchanger 1 OS=Mus musculus GN=Slc8a1 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.926e-19
Identity = 48/113 (42.48%), Postives = 67/113 (59.29%), Query Frame = 1
Query:  205 LLVPWRVLFAFVPPYHIAHGWIAFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDTAYN 543
            L V W+VLFAFVPP    +GW  FI S++ I  +   +  L     C  G+   V A   +A GTS PD  ASK+AA +   AD++I N+T SN+VN+++GIG+ W I   Y+
Sbjct:  778 LTVFWKVLFAFVPPTEYWNGWACFIVSILMIGLLTAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYH 890          
BLAST of EY684869 vs. ExPASy Swiss-Prot
Match: NAC1_HUMAN (Sodium/calcium exchanger 1 OS=Homo sapiens GN=SLC8A1 PE=1 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 1.926e-19
Identity = 48/113 (42.48%), Postives = 67/113 (59.29%), Query Frame = 1
Query:  205 LLVPWRVLFAFVPPYHIAHGWIAFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDTAYN 543
            L V W+VLFAFVPP    +GW  FI S++ I  +   +  L     C  G+   V A   +A GTS PD  ASK+AA +   AD++I N+T SN+VN+++GIG+ W I   Y+
Sbjct:  781 LTVFWKVLFAFVPPTEYWNGWACFIVSILMIGLLTAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYH 893          
BLAST of EY684869 vs. ExPASy Swiss-Prot
Match: NAC1_FELCA (Sodium/calcium exchanger 1 OS=Felis catus GN=SLC8A1 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.926e-19
Identity = 48/113 (42.48%), Postives = 67/113 (59.29%), Query Frame = 1
Query:  205 LLVPWRVLFAFVPPYHIAHGWIAFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDTAYN 543
            L V W+VLFAFVPP    +GW  FI S++ I  +   +  L     C  G+   V A   +A GTS PD  ASK+AA +   AD++I N+T SN+VN+++GIG+ W I   Y+
Sbjct:  778 LTVFWKVLFAFVPPTEYWNGWACFIVSILMIGILTAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYH 890          
BLAST of EY684869 vs. ExPASy Swiss-Prot
Match: NAC1_CAVPO (Sodium/calcium exchanger 1 OS=Cavia porcellus GN=SLC8A1 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.926e-19
Identity = 48/113 (42.48%), Postives = 67/113 (59.29%), Query Frame = 1
Query:  205 LLVPWRVLFAFVPPYHIAHGWIAFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDTAYN 543
            L V W+VLFAFVPP    +GW  FI S++ I  +   +  L     C  G+   V A   +A GTS PD  ASK+AA +   AD++I N+T SN+VN+++GIG+ W I   Y+
Sbjct:  778 LTVFWKVLFAFVPPTEYWNGWACFIVSILMIGLLTAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYH 890          
BLAST of EY684869 vs. ExPASy Swiss-Prot
Match: NAC1_CANFA (Sodium/calcium exchanger 1 OS=Canis familiaris GN=SLC8A1 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.926e-19
Identity = 48/113 (42.48%), Postives = 67/113 (59.29%), Query Frame = 1
Query:  205 LLVPWRVLFAFVPPYHIAHGWIAFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDTAYN 543
            L V W+VLFAFVPP    +GW  FI S++ I  +   +  L     C  G+   V A   +A GTS PD  ASK+AA +   AD++I N+T SN+VN+++GIG+ W I   Y+
Sbjct:  778 LTVFWKVLFAFVPPTEYWNGWACFIVSILMIGILTAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYH 890          
BLAST of EY684869 vs. ExPASy Swiss-Prot
Match: NAC3_HUMAN (Sodium/calcium exchanger 3 OS=Homo sapiens GN=SLC8A3 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.515e-19
Identity = 47/112 (41.96%), Postives = 65/112 (58.04%), Query Frame = 1
Query:  205 LLVPWRVLFAFVPPYHIAHGWIAFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDTAY 540
            L V W+VLFA VPP    HGW  F  S++ I  +  I+  L     C  G+   V A   +A GTS PD  ASK AA + + AD++I N+T SN+VN+++GIG+ W +   Y
Sbjct:  735 LTVFWKVLFACVPPTEYCHGWACFAVSILIIGMLTAIIGDLASHFGCTIGLKDSVTAVVFVAFGTSVPDTFASKAAALQDVYADASIGNVTGSNAVNVFLGIGLAWSVAAIY 846          
BLAST of EY684869 vs. ExPASy Swiss-Prot
Match: NAC1_BOVIN (Sodium/calcium exchanger 1 OS=Bos taurus GN=SLC8A1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.317e-19
Identity = 47/113 (41.59%), Postives = 67/113 (59.29%), Query Frame = 1
Query:  205 LLVPWRVLFAFVPPYHIAHGWIAFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDTAYN 543
            L V W+VLFAFVPP    +GW  FI S++ I  +   +  L    +C   +   V A   +A GTS PD  ASK+AA +   AD++I N+T SN+VN+++GIG+ W I   Y+
Sbjct:  778 LTVFWKVLFAFVPPTEYWNGWACFIVSILMIGLLTAFIGDLASHFACTIALKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYH 890          
BLAST of EY684869 vs. ExPASy Swiss-Prot
Match: NAC2_HUMAN (Sodium/calcium exchanger 2 OS=Homo sapiens GN=SLC8A2 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 2.129e-18
Identity = 48/124 (38.71%), Postives = 70/124 (56.45%), Query Frame = 1
Query:  205 LLVPWRVLFAFVPPYHIAHGWIAFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDTAYNFIVYKEPLRVQ 576
            L V W+VLFA VPP    HGW  F  S++ I  +  ++  L     C  G+   V A   +A GTS PD  ASK+AA +   AD++I N+T SN+VN+++G+G+ W +   Y + V   P  V+
Sbjct:  729 LTVFWKVLFACVPPTEYCHGWACFGVSILVIGLLTALIGDLASHFGCTVGLKDSVNAVVFVALGTSIPDTFASKVAALQDQCADASIGNVTGSNAVNVFLGLGVAWSVAAVY-WAVQGRPFEVR 851          
The following BLAST results are available for this feature:
BLAST of EY684869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
NAC3_RAT8.644e-2041.96Sodium/calcium exchanger 3 OS=Rattus norvegicus GN... [more]
NAC1_RAT1.926e-1942.48Sodium/calcium exchanger 1 OS=Rattus norvegicus GN... [more]
NAC1_MOUSE1.926e-1942.48Sodium/calcium exchanger 1 OS=Mus musculus GN=Slc8... [more]
NAC1_HUMAN1.926e-1942.48Sodium/calcium exchanger 1 OS=Homo sapiens GN=SLC8... [more]
NAC1_FELCA1.926e-1942.48Sodium/calcium exchanger 1 OS=Felis catus GN=SLC8A... [more]
NAC1_CAVPO1.926e-1942.48Sodium/calcium exchanger 1 OS=Cavia porcellus GN=S... [more]
NAC1_CANFA1.926e-1942.48Sodium/calcium exchanger 1 OS=Canis familiaris GN=... [more]
NAC3_HUMAN2.515e-1941.96Sodium/calcium exchanger 3 OS=Homo sapiens GN=SLC8... [more]
NAC1_BOVIN7.317e-1941.59Sodium/calcium exchanger 1 OS=Bos taurus GN=SLC8A1... [more]
NAC2_HUMAN2.129e-1838.71Sodium/calcium exchanger 2 OS=Homo sapiens GN=SLC8... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-004-F09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684869 ID=EY684869; Name=EY684869; organism=Citrus sinensis; type=EST; length=888bp
TTTATTAATGTCTACCTTGTGTAGTTGCACACTAGTAAGTTTTAGTGGTT
TTTCAGTATTAAATGGTTCCTCTTTTTCATTTTTTTCCAAGCATAGTAAT
AGATCCTCACAAATTATTTCTAATTTCTTAAACAGTTGGAAAGCCCAGAA
TCTAGGAAAATGAACAATATTTATCTACGGCTAGCCAGGATATTTTGGCA
ATCTCTCCTTGTGCCATGGAGAGTTCTATTTGCATTTGTGCCTCCTTATC
ATATTGCTCATGGCTGGATAGCCTTCATTTGCTCTCTAATTTTCATCAGT
GGGATAGCTTACATTGTTACGAAGCTCACAGATATTATAAGCTGTGTCAC
AGGTATAAATGCTTATGTCATAGCATTTACAGCATTAGCAAGTGGAACTT
CATGGCCAGATTTAGTGGCAAGTAAGATTGCTGCTGAACGGCAGATAACA
GCAGACTCTGCTATTGCGAATATCACTTGCAGCAATTCTGTGAATATTTA
TGTTGGCATTGGCATTCCGTGGTTGATTGACACTGCATACAATTTCATAG
TCTACAAGGAACCCTTGCGGGTCCAGAATGCCGAGGGACTCAGCTTTTTC
ATTGCTTGAATTCTTCTGGACCTTCGGGGGGGTGCGTTGCTGTTCCGGCG
GTAACCGCGCCTACGGCTGGGGCGGAAGTTTAGCGGCTCTCCGCTTACAA
CGCCAGGGTGCCTCCGAGACACAACCGCAGGGATATGCGCGCAAAAGGAC
GGAAGATGAGAAAGGCGAAGCAGAAGAGAGAGAACCGACAAAAGATAGAG
ATAAACGTACAATGCAGCTAGGATGGGACGTAGAAGAGGGAACGTGGAAA
ACACTGACGCTTGACCATGAAACGGGGCAGCTCCGATT
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