EY684864

Overview
NameEY684864
Unique NameEY684864
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length485
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8815 contig Csv1_Contig8815:1..485. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY684864 vs. ExPASy Swiss-Prot
Match: C72A1_CATRO (Secologanin synthase OS=Catharanthus roseus GN=CYP72A1 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 9.663e-23
Identity = 44/102 (43.14%), Postives = 72/102 (70.59%), Query Frame = 2
Query:   38 LIPTV--HTDTDIWGHDANEFKPERFAEGISKACKIPQAYVPFGVGPRLCLGRNFAMVQLKIMLSLIVSKFSFSISPNYKHSPAFRMIVEPRYGVHILLRKI 337
            ++PTV  H +  IWG DA EF P RF +G++ A K    Y+PF  GPR+CLG+NFA++Q K+ L++I+ +F F ++P+Y H+P   + V+P++G H++ +K+
Sbjct:  421 MLPTVMLHREKSIWGEDAMEFNPMRFVDGVANATKNNVTYLPFSWGPRVCLGQNFALLQAKLGLAMILQRFKFDVAPSYVHAPFTILTVQPQFGSHVIYKKL 522          
BLAST of EY684864 vs. ExPASy Swiss-Prot
Match: C13A5_CAEEL (Putative cytochrome P450 CYP13A5 OS=Caenorhabditis elegans GN=cyp-13A5 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.546e-12
Identity = 31/71 (43.66%), Postives = 48/71 (67.61%), Query Frame = 2
Query:   47 TVHTDTDIWGHDANEFKPERFAEGISKACKIPQAYVPFGVGPRLCLGRNFAMVQLKIMLSLIVSKFSFSIS 259
            T+H D  +WG DANEF+PER+  G  +       Y+PFG+GPR+C+G   AM++ K++L+ I+ K++F  S
Sbjct:  421 TLHYDPKVWGEDANEFRPERWESG-DELFYAKGGYLPFGMGPRICIGMRLAMMEKKMLLTHILKKYTFETS 490          
BLAST of EY684864 vs. ExPASy Swiss-Prot
Match: C13A7_CAEEL (Putative cytochrome P450 CYP13A7 OS=Caenorhabditis elegans GN=cyp-13A7 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 4.499e-12
Identity = 29/72 (40.28%), Postives = 48/72 (66.67%), Query Frame = 2
Query:   47 TVHTDTDIWGHDANEFKPERFAEGISKACKIPQAYVPFGVGPRLCLGRNFAMVQLKIMLSLIVSKFSFSISP 262
            ++H D  +WG D NEFKPER+  G  +       Y+PFG+GPR+C+G   AM+++K++L+ I+  ++F  +P
Sbjct:  421 SLHHDPKVWGDDVNEFKPERWESG-DELFFAKGGYLPFGMGPRICIGMRLAMMEMKMLLTNILKNYTFETTP 491          
BLAST of EY684864 vs. ExPASy Swiss-Prot
Match: C13A4_CAEEL (Putative cytochrome P450 CYP13A4 OS=Caenorhabditis elegans GN=cyp-13A4 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 4.499e-12
Identity = 31/71 (43.66%), Postives = 48/71 (67.61%), Query Frame = 2
Query:   47 TVHTDTDIWGHDANEFKPERFAEGISKACKIPQAYVPFGVGPRLCLGRNFAMVQLKIMLSLIVSKFSFSIS 259
            T+H D  +WG DA+EFKPER+  G  +       Y+PFG+GPR+C+G   AM++ K++L+ I+ K++F  S
Sbjct:  421 TLHYDPKVWGDDASEFKPERWETG-DELFYAKGGYLPFGMGPRICIGMRLAMMEEKLLLTHILKKYTFDTS 490          
BLAST of EY684864 vs. ExPASy Swiss-Prot
Match: C13A1_CAEEL (Putative cytochrome P450 CYP13A1 OS=Caenorhabditis elegans GN=cyp-13A1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 4.499e-12
Identity = 32/68 (47.06%), Postives = 44/68 (64.71%), Query Frame = 2
Query:   47 TVHTDTDIWGHDANEFKPERFAEGISKACKIPQAYVPFGVGPRLCLGRNFAMVQLKIMLSLIVSKFSF 250
            T+HTD +IWG DA +FKPER+    S        Y+PFG+GPR C+G   A ++ KI+L  I+ KF+F
Sbjct:  421 TLHTDPNIWGDDAEDFKPERWQTPNSDQIYQKSGYIPFGLGPRQCIGMRLAYMEEKILLVHILRKFTF 488          
BLAST of EY684864 vs. ExPASy Swiss-Prot
Match: C13A8_CAEEL (Putative cytochrome P450 CYP13A8 OS=Caenorhabditis elegans GN=cyp-13A8 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 1.309e-11
Identity = 31/68 (45.59%), Postives = 47/68 (69.12%), Query Frame = 2
Query:   47 TVHTDTDIWGHDANEFKPERFAEGISKACKIPQAYVPFGVGPRLCLGRNFAMVQLKIMLSLIVSKFSF 250
            T+H D ++WG+D  EFKPER+   ++      QAY+ FG GPR+CLG  FA+++ K +LS I+ K++F
Sbjct:  415 TLHHDKNVWGNDVEEFKPERWDSPLTPQ----QAYLSFGAGPRVCLGMRFALLEQKGLLSHILKKYTF 478          
BLAST of EY684864 vs. ExPASy Swiss-Prot
Match: C13A3_CAEEL (Putative cytochrome P450 CYP13A3 OS=Caenorhabditis elegans GN=cyp-13A3 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.309e-11
Identity = 31/67 (46.27%), Postives = 46/67 (68.66%), Query Frame = 2
Query:   47 TVHTDTDIWGHDANEFKPERFAEGISKACKIPQAYVPFGVGPRLCLGRNFAMVQLKIMLSLIVSKFS 247
            T+H D   WG +ANEFKPER+  G  +A     AY+PFG+GPR+C+G   A ++ K++L+ I+ K+S
Sbjct:  421 TLHYDPKFWGENANEFKPERWESGDEQAVA-KGAYLPFGLGPRICIGMRLAYMEEKMLLAQILKKYS 486          
BLAST of EY684864 vs. ExPASy Swiss-Prot
Match: CPXB_BACME (Bifunctional P-450/NADPH-P450 reductase OS=Bacillus megaterium GN=CYP102A1 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 2.233e-11
Identity = 34/82 (41.46%), Postives = 47/82 (57.32%), Query Frame = 2
Query:   29 LWTLIPTVHTDTDIWGHDANEFKPERFAEGISKACKIPQ-AYVPFGVGPRLCLGRNFAMVQLKIMLSLIVSKFSFSISPNYK 271
            L  LIP +H D  IWG D  EF+PERF         IPQ A+ PFG G R C+G+ FA+ +  ++L +++  F F    NY+
Sbjct:  354 LMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYE 431          
BLAST of EY684864 vs. ExPASy Swiss-Prot
Match: C13A6_CAEEL (Putative cytochrome P450 CYP13A6 OS=Caenorhabditis elegans GN=cyp-13A6 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.233e-11
Identity = 29/73 (39.73%), Postives = 46/73 (63.01%), Query Frame = 2
Query:   47 TVHTDTDIWGHDANEFKPERFAEGISKACKIPQAYVPFGVGPRLCLGRNFAMVQLKIMLSLIVSKFSFSISPN 265
            T+H +  IWG D  +FKPER+  G  +  +   +Y+PFG GPR C+G   A ++ KI+L+ I+ ++SF  + N
Sbjct:  419 TLHHNPRIWGEDVEDFKPERWENGACEHLEHNGSYIPFGSGPRQCIGMRLAQMEQKILLAQILKEYSFRTTKN 491          
BLAST of EY684864 vs. ExPASy Swiss-Prot
Match: CP3AR_ONCMY (Cytochrome P450 3A27 OS=Oncorhynchus mykiss GN=cyp3a27 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.809e-11
Identity = 33/75 (44.00%), Postives = 49/75 (65.33%), Query Frame = 2
Query:   38 LIPT--VHTDTDIWGHDANEFKPERFAEGISKACKIPQAYVPFGVGPRLCLGRNFAMVQLKIMLSLIVSKFSFSI 256
            L+PT  +H D +IW  D  EFKPERF++  +K    P  Y+PFG GPR C+G  FA++ +K+ +  I+  F+FS+
Sbjct:  400 LVPTWTLHRDPEIWS-DPEEFKPERFSKE-NKESIDPYTYMPFGAGPRNCIGMRFALIMIKLAMVEILQSFTFSV 472          
The following BLAST results are available for this feature:
BLAST of EY684864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
C72A1_CATRO9.663e-2343.14Secologanin synthase OS=Catharanthus roseus GN=CYP... [more]
C13A5_CAEEL1.546e-1243.66Putative cytochrome P450 CYP13A5 OS=Caenorhabditis... [more]
C13A7_CAEEL4.499e-1240.28Putative cytochrome P450 CYP13A7 OS=Caenorhabditis... [more]
C13A4_CAEEL4.499e-1243.66Putative cytochrome P450 CYP13A4 OS=Caenorhabditis... [more]
C13A1_CAEEL4.499e-1247.06Putative cytochrome P450 CYP13A1 OS=Caenorhabditis... [more]
C13A8_CAEEL1.309e-1145.59Putative cytochrome P450 CYP13A8 OS=Caenorhabditis... [more]
C13A3_CAEEL1.309e-1146.27Putative cytochrome P450 CYP13A3 OS=Caenorhabditis... [more]
CPXB_BACME2.233e-1141.46Bifunctional P-450/NADPH-P450 reductase OS=Bacillu... [more]
C13A6_CAEEL2.233e-1139.73Putative cytochrome P450 CYP13A6 OS=Caenorhabditis... [more]
CP3AR_ONCMY3.809e-1144.00Cytochrome P450 3A27 OS=Oncorhynchus mykiss GN=cyp... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-004-F03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684864 ID=EY684864; Name=EY684864; organism=Citrus sinensis; type=EST; length=485bp
GAACATTAAAATTCCACAGTGTCTATGCTTATGGACTCTGATTCCGACTG
TACACACGGACACTGACATTTGGGGACACGATGCAAACGAGTTTAAACCC
GAGAGATTTGCGGAAGGCATCTCAAAAGCTTGCAAAATCCCTCAGGCTTA
TGTCCCGTTTGGAGTGGGACCTCGGCTGTGCTTGGGCAGAAACTTTGCGA
TGGTTCAGTTGAAAATTATGCTCTCTCTAATTGTCTCCAAGTTTAGTTTC
TCAATATCACCAAATTACAAGCACTCTCCCGCTTTCAGAATGATTGTAGA
GCCTCGATACGGTGTACATATCCTCCTCCGGAAGATCTAATTTGGATTGA
TTAGTTGGCTTGGCGTGTTTGATGAAATCAAAAATTATCTGACAATGTTT
TTGATCAATTACAAATGATCAGACAATGTTTTAGCTATACTTTCATTTCT
AGCTATACCTTTCATTTCTCTTAAAAAAAAAAAAA
back to top