EY684856

Overview
NameEY684856
Unique NameEY684856
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length982
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY684856_ssr856 microsatellite EY684856_ssr856:856..867. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig305 contig Csv1_Contig305:540..1521. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY684856 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica GN=SAP8 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.404e-13
Identity = 34/40 (85.00%), Postives = 36/40 (90.00%), Query Frame = 2 
Query:   44 YCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 163
            YC  HRYSDKH+C FDYRTAARDAI KANPV+KAEKLDKI
Sbjct:  132 YCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171
[Close]
BLAST of EY684856 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica GN=SAP8 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.404e-13
Identity = 34/40 (85.00%), Postives = 36/40 (90.00%), Query Frame = 2 
Query:   44 YCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 163
            YC  HRYSDKH+C FDYRTAARDAI KANPV+KAEKLDKI
Sbjct:  132 YCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171
[Close]
BLAST of EY684856 vs. ExPASy Swiss-Prot
Match: SAP4_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza sativa subsp. japonica GN=SAP4 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.396e-13
Identity = 34/40 (85.00%), Postives = 35/40 (87.50%), Query Frame = 2 
Query:   44 YCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 163
            YC  HRYSDKH C FDYRTAARDAI KANPV+KAEKLDKI
Sbjct:  134 YCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173
The following BLAST results are available for this feature:
BLAST of EY684856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
SAP8_ORYSJ1.404e-1385.00Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP8_ORYSI1.404e-1385.00Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP4_ORYSJ2.396e-1385.00Zinc finger A20 and AN1 domain-containing stress-a... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-004-E06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684856 ID=EY684856; Name=EY684856; organism=Citrus sinensis; type=EST; length=982bp
TGCACGCAGTACGGTCGGATTCCGGGTCGACCCACGCGTCCGATACTGTG
TGTCACATCGCTATTCGGACAAACATAACTGCCCCTTTGACTACCGCACT
GCTGCTAGGGATGCTATAATTAAAGCAAACCCTGTGATCAAGGCTGAGAA
GCTAGATAAAATCTAGATTCAATGGGATGAGGTTTCAATAATCAAAGAAT
GATGATCTTGCTCATCTGTTAGAGGCTTCTTCTGAGAAGGCCACGTATCT
TATCAGGTGTCCTTTAATGTTATATATGCTGGGGGCCCATTATCAGTTAT
AGGACATCTCTGCAGTATGAAGAACTCTATGTCGTGTGTTGGCGAGAACT
TATATGTTGGCTTCAGTGTTTAAGAGTGAATCTGTGCTCTGGTTTTATGG
ACTTTTGGATAGCTTTCCAATTTGTCATTATGTTTCATATGGCATTTCAC
TTTATTAGTTTCTGCTTAAAAAAAAAAATTCAGAAAAAGATGGTTGTGCT
ATTTCCATATGATGTGGAAAACATACATGGACAATTCTTGCGCTTAACCC
TCTGAAATTTTTAATTATGGTTTCTATCGGCTTTATTTCTCCCCAAAACA
CAAAAGAACTGCGACCCCGAAAACACCCCCAAGGTCGAGGAACACCCCGA
TGAAACAAGCAAGAACGAAAAGGGGCACCCGTCTCAAAACGTCACAAACT
AAAGACCCCGGCGAACAAAACACCTGGTTTTTCAATAGCTCCACAAATTC
CACATACATGGCGACAGCTGGAAACGCCAGCGACGGCGAGGACACCCGGC
GGGGCACCACCAAATCACGACCACCTTATCAAAACGACCAACAAAAAAAT
AAAATCAAACAAACAAACAGCACCATCATAAAAACACCAACCCCAAACCA
CCAACAACACCCAAACAGATACAAAAAGACCCACCCCCTCCACAAGCGAG
CGACAATAACGACATGGACACGAAAGACGCAT
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