EY684852

Overview
NameEY684852
Unique NameEY684852
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1095
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY684852_ssr523 microsatellite EY684852_ssr523:523..532. BLAST: Citrus ESTs to SwissProt
Homology
[Close]
BLAST of EY684852 vs. ExPASy Swiss-Prot
Match: ZNUA_BRUSU (High-affinity zinc uptake system protein znuA OS=Brucella suis GN=znuA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.430e-11
Identity = 31/86 (36.05%), Postives = 52/86 (60.47%), Query Frame = 1 
Query:   40 NARVIANRLSADLTAADPANAQRYQSNVKAFDGRMDALDARLKARMADVAGKPYFVFHEAFDYFEDAYGLKHTGVFRVAAEVHRGA 297
            N +++A  ++  L  +DP +A +Y+ N KA+  ++DAL   + A +  V  KP+ VFH+A+ YFE+ +G+K  G   V+ E   GA
Sbjct:  175 NGKILAADIAKTLGESDPEHAAQYEKNAKAYGEKLDALTREVAAELKPVKDKPFIVFHDAYQYFENRFGMKAAGSITVSPEKAPGA 260
[Close]
BLAST of EY684852 vs. ExPASy Swiss-Prot
Match: ZNUA_BRUME (High-affinity zinc uptake system protein znuA OS=Brucella melitensis GN=znuA PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 3.430e-11
Identity = 31/86 (36.05%), Postives = 52/86 (60.47%), Query Frame = 1 
Query:   40 NARVIANRLSADLTAADPANAQRYQSNVKAFDGRMDALDARLKARMADVAGKPYFVFHEAFDYFEDAYGLKHTGVFRVAAEVHRGA 297
            N +++A  ++  L  +DP +A +Y+ N KA+  ++DAL   + A +  V  KP+ VFH+A+ YFE+ +G+K  G   V+ E   GA
Sbjct:  175 NGKILAADIAKTLGESDPEHAAQYEKNAKAYGEKLDALTREVAAELKPVKDKPFIVFHDAYQYFENRFGMKAAGSITVSPEKAPGA 260
[Close]
BLAST of EY684852 vs. ExPASy Swiss-Prot
Match: ZNUA_BRUAB (High-affinity zinc uptake system protein znuA OS=Brucella abortus GN=znuA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.430e-11
Identity = 31/86 (36.05%), Postives = 52/86 (60.47%), Query Frame = 1 
Query:   40 NARVIANRLSADLTAADPANAQRYQSNVKAFDGRMDALDARLKARMADVAGKPYFVFHEAFDYFEDAYGLKHTGVFRVAAEVHRGA 297
            N +++A  ++  L  +DP +A +Y+ N KA+  ++DAL   + A +  V  KP+ VFH+A+ YFE+ +G+K  G   V+ E   GA
Sbjct:  175 NGKILAADIAKTLGESDPEHAAQYEKNAKAYGEKLDALTREVAAELKPVKDKPFIVFHDAYQYFENRFGMKAAGSITVSPEKAPGA 260
[Close]
BLAST of EY684852 vs. ExPASy Swiss-Prot
Match: ZNUA_BRUA2 (High-affinity zinc uptake system protein znuA OS=Brucella abortus (strain 2308) GN=znuA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.430e-11
Identity = 31/86 (36.05%), Postives = 52/86 (60.47%), Query Frame = 1 
Query:   40 NARVIANRLSADLTAADPANAQRYQSNVKAFDGRMDALDARLKARMADVAGKPYFVFHEAFDYFEDAYGLKHTGVFRVAAEVHRGA 297
            N +++A  ++  L  +DP +A +Y+ N KA+  ++DAL   + A +  V  KP+ VFH+A+ YFE+ +G+K  G   V+ E   GA
Sbjct:  175 NGKILAADIAKTLGESDPEHAAQYEKNAKAYGEKLDALTREVAAELKPVKDKPFIVFHDAYQYFENRFGMKAAGSITVSPEKAPGA 260
The following BLAST results are available for this feature:
BLAST of EY684852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ZNUA_BRUSU3.430e-1136.05High-affinity zinc uptake system protein znuA OS=B... [more]
ZNUA_BRUME3.430e-1136.05High-affinity zinc uptake system protein znuA OS=B... [more]
ZNUA_BRUAB3.430e-1136.05High-affinity zinc uptake system protein znuA OS=B... [more]
ZNUA_BRUA23.430e-1136.05High-affinity zinc uptake system protein znuA OS=B... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-004-E02-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684852 ID=EY684852; Name=EY684852; organism=Citrus sinensis; type=EST; length=1095bp
CTGCACCGCAGTACGGTCCGGATTCCCGGGTCGACGGTCAACGCCCGAGT
GATCGCCAACCGCCTCTCTGCGGACCTCACTGCTGCTGATCCGGCCAACG
CCCAGCGTTACCAGAGCAACGTGAAGGCCTTTGATGGCCGTATGGACGCG
TTGGATGCGCGCTTGAAAGCACGTATGGCGGATGTCGCCGGCAAGCCTTA
CTTCGTATTCCATGAGGCGTTCGATTACTTCGAAGATGCCTACGGCCTCA
AGCACACTGGTGTGTTCCGCGTTGCCGCAGAAGTGCACCGGGGCGCACAA
CCTGTGGATGGCGATGCACACCCGCCTGCAGGACCCGCCAACGACCCCAG
CGGTACGCCACTGCACTTTCACCACCCCCTCAGCCACAACCCCCCCACAG
GCAAGATATCAGCACACACCCAGAAACCCACCCTACCCCCCCCCCGTCGC
GGGGGGCCAGTCCATAACCCCAGCACCAGGCGACGTCACTGCACCCCGTC
ACCGGAGGAGACCGACCGCAGGCACACACACACCAACTGGACCCCCCCAC
CACTGCAAACAACGCAAACACAGCGCCCCCGCCCCCCCCCGCCCGCCACA
ACAGCCGTCAGCCGCCGCCGGCAGGGCGCAGCAGCGCCCACAGAGCCCCA
CAGAGCAGCAGCCCGCGACAAACCGCCGGCGCGTACGGCCCATGATAAAC
CCACACAACCACCAAACACCCGCCAAGATCGCACCCGGCCCACGCGAACC
CTCCGTAGTGCCAAGAAAGCCAATGGAGATCTACACGGCGCCACCTACCC
GCTTTACCCCCCGCCCACCCCACGCCAAGAACGTTGACCCCCACCCCCAC
CAACCGTACACACCACTCCGCACCGCACCCAGCCCACGCCTACACGGCCA
CCACGCCCCGGCGCGCTCGCGGAGCCGACCCACGAACCAGAACACCCAAC
GACCGCGCCAAAGGCCCCCAATAGCAAAGGCAGCAAGCAGCGCGCGGCGC
CACACGGCAACGCGCCGGCTGTGCACGCACTACGCCCAACGCTCGCGGCC
AGGCCCCCAACTAACGCGACGAATCCCCAATCAAAACACCCCACC
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