EY684824

Overview
NameEY684824
Unique NameEY684824
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length944
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY684824 vs. ExPASy Swiss-Prot
Match: EXOC5_ORYSJ (Exocyst complex component 5 OS=Oryza sativa subsp. japonica GN=SEC10 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.223e-36
Identity = 73/79 (92.41%), Postives = 78/79 (98.73%), Query Frame = 1 
Query:   64 WQKFTFNPSGGLRLKRDITEYGEFVRSFNAPSVDEKFELLGIMANVFIVAPESLSTLFEGTPSIRKDAQRFIQLREDYK 300
            WQKFTF+PSGGLRLKRDITEYGEFVRSFNAPS+DEKFELLGIMANVFIVAPESL++LFEGTPSIRKDA RFIQLR+DYK
Sbjct:  714 WQKFTFSPSGGLRLKRDITEYGEFVRSFNAPSIDEKFELLGIMANVFIVAPESLASLFEGTPSIRKDALRFIQLRDDYK 792
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BLAST of EY684824 vs. ExPASy Swiss-Prot
Match: EXOC5_ARATH (Exocyst complex component 5 OS=Arabidopsis thaliana GN=SEC10 PE=2 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 2.553e-33
Identity = 69/79 (87.34%), Postives = 74/79 (93.67%), Query Frame = 1 
Query:   64 WQKFTFNPSGGLRLKRDITEYGEFVRSFNAPSVDEKFELLGIMANVFIVAPESLSTLFEGTPSIRKDAQRFIQLREDYK 300
            WQKFTFNPSGGLRLKRD+ EY  FV+SF APSVDEKFELLGI+ANVFIVAP+SL TLFEG+PSIRKDAQRFIQLREDYK
Sbjct:  731 WQKFTFNPSGGLRLKRDLNEYVGFVKSFGAPSVDEKFELLGIIANVFIVAPDSLPTLFEGSPSIRKDAQRFIQLREDYK 809
The following BLAST results are available for this feature:
BLAST of EY684824 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
EXOC5_ORYSJ3.223e-3692.41Exocyst complex component 5 OS=Oryza sativa subsp.... [more]
EXOC5_ARATH2.553e-3387.34Exocyst complex component 5 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-004-B05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684824 ID=EY684824; Name=EY684824; organism=Citrus sinensis; type=EST; length=944bp
CAGTACGGTCGGGATTCCGGGTCGACCCACGCGTCCGCGGACGCGTCCGC
CCACGCGTCCGATTGGCAGAAATTCACGTTTAATCCCAGTGGGGGATTAC
GCCTGAAGCGTGACATAACCGAGTATGGAGAATTTGTGCGCAGCTTTAAC
GCTCCTTCTGTTGATGAAAAATTTGAATTGTTGGGCATCATGGCTAATGT
CTTTATTGTTGCTCCTGAAAGTCTATCTACTTTGTTTGAGGGTACCCCCA
GTATTCGGAAAGATGCGCAAAGGTTTATTCAGCTTAGAGAGGACTACAAG
AGTGCAAAGCTTGCATCCAGGCTTAGCTCATTATGGGCAAGCTCTACTTG
ACACTGATGGGGTATGCTGATATGAAGGTGACCTTCCAATTCTCTTGAAG
ATCTTACCTAAAGAAGTTAATAGCGGGAGAAGGCCGATACTTAATGGTGG
ATAGTTTTGGTTGCACAACTGAATCATCTCCTCCTGAGAATCAGGTATAT
TGGAGTTTTTCTCTTATAATATTCTTTACTCAATTCCACCATTTTTGAGT
ATATATTGTGGAAACCTGAATGGGAAAAACACCACGGAGCATTTTTTAAG
GGGCCCCTTTCCATTTCAATAAAGTACAAAGTCATGCGACGTCGACTCGA
GACCCGTCGCCGATCAGCAGGCTCCACGGTCAACATACGCATCACCTCCA
ACTACGCACCTACCTCAACTATAGCGTCCTCCTTTCCCGTGCTCTCCTCG
CCGACAGACATAGCCGCCCCCCGCGTCAAAGGACGCAGCCGCTAGGGATG
AGCACCGAAACCCAGAAACGCCTCGTAAACGAGCGGCGCGAAGACTCTAA
CACACTGTTCGACAATCACCCCACAGACACGATACGACGCGAAAAAACGA
ACTGACACTGACCGTAGCTCAACGAGCTAAAAACCACTAGCACC
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