EY684788

Overview
NameEY684788
Unique NameEY684788
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length993
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY684788 vs. ExPASy Swiss-Prot
Match: FUSC_BURCE (Fusaric acid resistance protein fusC OS=Burkholderia cepacia GN=fusC PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 9.096e-18
Identity = 53/120 (44.17%), Postives = 74/120 (61.67%), Query Frame = -1 
Query:   61 WKARVSIPFLEDPSTGGRNGRLTRLNSEFMSITTRFNALHQLLERLRSQEADHVVAAIKPGLQDLAELLDGFSGRALTSPDAARLANQLNTYKEGLPAKVRSLRTSFQESQPSDAEQLDF 420
            ++A  S+   EDP T  R+GRL RLNSEFMS ++RF+ALHQL+ RL +  A   + AI+P  +++A LL        TS DAA  A QL  +++ LP ++R+ R    E+QP D   LDF
Sbjct:   74 FEAARSMAVFEDPDTRMRSGRLARLNSEFMSASSRFHALHQLMNRLHAAGAQAAIDAIEPYFREIAPLLTRNGEPVRTSIDAAHSAEQLLAWRDALPRRIRATRAEL-ETQP-DFPLLDF 191

HSP 2 Score: 22.3274 bits (46), Expect = 9.096e-18
Identity = 10/13 (76.92%), Postives = 10/13 (76.92%), Query Frame = -3 
Query:   26 FHTAYELLYRFST 64
            F TA ELLYRF T
Sbjct:  191 FDTAAELLYRFIT 203
The following BLAST results are available for this feature:
BLAST of EY684788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FUSC_BURCE9.096e-1844.17Fusaric acid resistance protein fusC OS=Burkholder... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-003-F08-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684788 ID=EY684788; Name=EY684788; organism=Citrus sinensis; type=EST; length=993bp
TGCACGCAGTACGGTCCGGATTCCGGGTCGAGAAGCGGTACAGCAGTTCG
TAGGCGGTGTGAAATCCAGCTGCTCGGCGTCGCTGGGCTGACTTTCCTGG
AAGCTCGTGCGCAGGCTGCGTACCTTGGCGGGCAGGCCTTCCTTATAGGT
ATTCAACTGATTGGCCAGGCGCGCCGCGTCGGGGCTGGTGAGGGCACGGC
CGGAAAAACCGTCGAGCAATTCCGCGAGGTCTTGCAGGCCGGGTTTGATG
GCGGCCACCACGTGATCGGCCTCTTGGCTGCGCAGGCGTTCGAGCAATTG
GTGCAAGGCATTGAAGCGAGTAGTGATGCTCATGAACTCGCTGTTCAAGC
GCGTCAGCCGACCATTGCGCCCACCCGTGGACGGGTCCTCGAGGAAGGGG
ATGCTGACGCGAGCCTTCCACACCCACGACTTGGGGGAGGGGGAGAAAAA
CCCTCCCCACCAACACAACTCCCTCCCGAGCCCACACAAAAACCCGGCCC
ACTGGCCCCCCCGCGACACACCCCATACAGCCACGACACAAAAGCCACCC
AAACAAGGAAGAGACGCGCAAACCCACCCCAGCCCGCACATCCCGGCACA
GCAACCAACGAAAAGCGAAGTCCAGCAAGACAGACACCCCACCGACACAC
CGACACGACCGAAACAACACTCACCGACTCACACAGGCAGCACGCGCCCA
GCACCACAACACCAGGCCTAACCGACACAAAAGACCCGAACGAGAAGAGA
AAGAACAAAAAAGAAAAACAACGCGGACACGGAAAAACACACCATCCCGC
ACGACCGACCCGGCCGCACACCCACGCGCCCGCCGAGCCCTACAGAGGAC
CCGGAACATTAACGAGGGCAAGCGACGGACCACACCGCTCACCGACTGAC
CTGGACCCACTGAACGAAAAAGCGCGCGCCACACCAGCTAAGGCCAAAAC
TGAACACAACGGCAGACGCAGCCCACCCCGGCGAAGCAACCCA
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