EY684787
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: MRM1_DICDI (Mitochondrial rRNA methyltransferase OS=Dictyostelium discoideum GN=mrm1 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.650e-29 Identity = 73/199 (36.68%), Postives = 109/199 (54.77%), Query Frame = 2 Query: 2 IKETSKHDLNMVVGNRPHQGLVLDASPLEMVKIKELDPISADE-----------------------DQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSV-----SSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIPG 514 ++ +K L+ RPHQG++LDASPL ++ I L+ +E D+ LW+ LDE+ DPQN+GAIIR+ FF GVV+ KNS+P++ SK+S+G+ E + ++ FL SS NGW V+G S+ + + +N+I QPTIL+LG+EG GL+P V C ++I G Sbjct: 304 VRSVNKGTLDSFSKGRPHQGIILDASPLTLLNIDFLEKFDINERVNKRMNGGGGGGGGGGGNKINNDKYPLWLVLDELWDPQNVGAIIRNCSFFNIDGVVISNKNSSPITPAASKSSSGACESFVINRTESIEGFLKSSQRNGWNVVGTSLDDLNENQPCLDINQIKLDQPTILILGNEGFGLKPSVLEICNKTIKIVG 502
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: MRM1_SCHPO (rRNA methyltransferase, mitochondrial OS=Schizosaccharomyces pombe GN=mrm1 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.001e-26 Identity = 78/205 (38.05%), Postives = 109/205 (53.17%), Query Frame = 2 Query: 2 IKETSKHDLNMVVGNRPHQGLVLDASPLEMVKIKEL-----------------------DPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIP-----------PGQPTILVLGSEGTGLRPLVERSCTHLVRIPG 514 IK +K LN + RPH G+VL+AS L + I +L S+ ++ L+V +D +TDPQN+GA+IRSAY GA G++L K++ LS VVSKASAG+LE+ + + N M FL +S GW+V+G + A+P N+ +P ILVLGSE GLR + C+H V IPG Sbjct: 78 IKSVNKEHLNQITACRPHNGVVLEASSLNVPTISDLLFPAGEEYNNKNGQDSPHNDLNEGKSSSSDNYPPLYVYVDGITDPQNMGAVIRSAYILGAKGILLSKKHNTFLSPVVSKASAGALEVFNISHVKNPMVFLRNSVLKGWKVIG---TKPALPDNKDQIYTPHKIKTELMNEPKILVLGSE-KGLRTNILTQCSHYVSIPG 278
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: MRM1_MOUSE (rRNA methyltransferase 1, mitochondrial OS=Mus musculus GN=Mrm1 PE=2 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 5.493e-25 Identity = 69/175 (39.43%), Postives = 104/175 (59.43%), Query Frame = 2 Query: 17 KHDLNMVVGNRPHQGLVLDASPLEMVKIKELDPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGG--------SVSSKAVPLN---EIPPGQPTILVLGSEGTGLRPLVERSCTHLVRI 508 + L+ + G + HQG+ ++ SPL E S+ +D LW+ L+ + DP+NLGA++RSA+F G V+ +NS PL+ VVSKASAG++E++++ ++ FL + A+ GW V+G S SSK VP+ E +PT+LVLGSEG+GL V SC L+ I Sbjct: 102 RQKLDALCGYQVHQGVCMEVSPLRPRPCDEAADTSSGDDPQQLWLVLEGLQDPRNLGAVMRSAHFLGVDRVITSQRNSCPLTPVVSKASAGAMEVMDVFATPDLPGFLQAKAQQGWLVVGTVGCPGPEISQSSK-VPITSCLEFVWDRPTLLVLGSEGSGLSQEVFASCQLLLTI 275
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: MRM1_HUMAN (rRNA methyltransferase 1, mitochondrial OS=Homo sapiens GN=MRM1 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 7.175e-25 Identity = 63/162 (38.89%), Postives = 98/162 (60.49%), Query Frame = 2 Query: 53 HQGLVLDASPLEMVKIKELDPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLG--GSVSSKAVPLNEIPP--------GQPTILVLGSEGTGLRPLVERSCTHLVRI 508 HQG+ ++ SPL +E S +D LW+ LD + DP+N GA++RSA+F G V+ +NS PL+ VVSK+SAG++E++++ +++ FL + A+ GW V G G S++ +EIP +PT+LVLG+EG+GL V+ SC L+ I Sbjct: 116 HQGVCMEVSPLRPRPWREAGEASPGDDPQQLWLVLDGIQDPRNFGAVLRSAHFLGVDKVITSRRNSCPLTPVVSKSSAGAMEVMDVFSTDDLTGFLQTKAQQGWLVAGTVGCPSTEDPQSSEIPIMSCLEFLWERPTLLVLGNEGSGLSQEVQASCQLLLTI 277
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: Y955_SYNY3 (Uncharacterized tRNA/rRNA methyltransferase slr0955 OS=Synechocystis sp. (strain PCC 6803) GN=slr0955 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 7.425e-22 Identity = 58/170 (34.12%), Postives = 94/170 (55.29%), Query Frame = 2 Query: 2 IKETSKHDLNMVVGNRPHQGLVLDASPLEMVKIKELDPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 511 + E LN + N HQG+ +P ++ +L + + A + + +D +TDP NLGAIIR+A FGA G+VL + A ++ V K +AG+LE + N+ + L + E+G+ + G+V+ K L++ +P LV+GSEG GL L ++ C HL+ IP Sbjct: 171 VDEVDNFRLNQITHNANHQGIAAQVAPYHYWELGDLIDKAKSQSTAPVLIIIDSITDPHNLGAIIRTAEAFGAQGMVLPQRRVAGITSTVMKVAAGALEHFPVARVVNLSRALETLKESGFWIY-GTVAGKQTALHQADLREPMGLVIGSEGEGLSLLTQKHCDHLITIP 339
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: Y1447_MYCGI (Uncharacterized tRNA/rRNA methyltransferase Mflv_1447 OS=Mycobacterium gilvum (strain PYR-GCK) GN=Mflv_1447 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 9.697e-22 Identity = 62/170 (36.47%), Postives = 91/170 (53.53%), Query Frame = 2 Query: 2 IKETSKHDLNMVVGNRPHQGLVLDASPLEMVKIKELDPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 511 I E +HDL+ + N HQG+ L P +L + + +L VALD ++DP+NLGAI+RS FG GVVL + SA ++ V + SAG+ + N+ + L A+ G +V+G ++EI PTI+V+GSEG GL LV +C +V IP Sbjct: 118 ILEVQRHDLDRMAANGLHQGIALQVPPYAYAHPDDLLRDAKSDAAPALLVALDNISDPRNLGAIVRSVAAFGGHGVVLPQRRSASVTAVAWRTSAGAAARTPVARATNLNRTLKQYADAGLQVVGLDAGGDTT-IDEIDGLTPTIVVVGSEGKGLSRLVRENCDRIVSIP 286
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: Y574_MYCA1 (Uncharacterized tRNA/rRNA methyltransferase MAV_0574 OS=Mycobacterium avium (strain 104) GN=MAV_0574 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 6.285e-21 Identity = 60/170 (35.29%), Postives = 92/170 (54.12%), Query Frame = 2 Query: 2 IKETSKHDLNMVVGNRPHQGLVLDASPLEMVKIKELDPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 511 I E + DL+ + GN HQG+ L P +L +A A L VALD ++DP+NLGAI+RS FG GV++ + SA ++ V + SAG+ + + N+ + L A+ G RV+G L+++ P ++V+GSEG GL LV ++C +V IP Sbjct: 115 ILEVPRADLDRMTGNHLHQGIALQVPPYIYAHPDDLLEAAAGSPPALL-VALDNISDPRNLGAIVRSVAAFGGHGVLIPQRRSASVTAVAWRTSAGAAARIPVARATNLTRTLQDWADRGLRVIGLDAGGDTT-LDDLDGSDPLVVVVGSEGKGLSRLVRQNCDEVVSIP 282
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: Y479_MYCPA (Uncharacterized tRNA/rRNA methyltransferase MAP_0479 OS=Mycobacterium paratuberculosis GN=MAP_0479 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.072e-20 Identity = 60/170 (35.29%), Postives = 93/170 (54.71%), Query Frame = 2 Query: 2 IKETSKHDLNMVVGNRPHQGLVLDASPLEMVKIKELDPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 511 I E + DL+ + GN HQG+ L P +L +A A L VALD ++DP+NLGAI+RS FG GV++ + SA ++ V + SAG+ + + N+ + L A+ G RV+G + L+++ P ++V+GSEG GL LV ++C +V IP Sbjct: 115 ILEVPRADLDRMTGNHLHQGIALQVPPYIYAHPDDLLEAAAGSLPALL-VALDNISDPRNLGAIVRSVAAFGGHGVLIPQRRSASVTAVAWRTSAGAAARIPVARATNLTRTLQDWADRGLRVIGLDAGGDTM-LDDLDGSDPLVVVVGSEGKGLSRLVRQNCDEVVSIP 282
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: Y5337_MYCVP (Uncharacterized tRNA/rRNA methyltransferase Mvan_5337 OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=Mvan_5337 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.829e-20 Identity = 57/170 (33.53%), Postives = 90/170 (52.94%), Query Frame = 2 Query: 2 IKETSKHDLNMVVGNRPHQGLVLDASPLEMVKIKELDPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 511 I E +HDL+ + N HQG+ L P +L + + +L VALD ++DP+NLGAI+RS FG GV++ + SA ++ V + SAG+ + N+ + L A+ G +V+G +++I P ++V+GSEG GL LV +C +V IP Sbjct: 118 ILEVPRHDLDRIAANGMHQGIALQVPPYNYAHPDDLLAEAKSDAMPALLVALDNISDPRNLGAIVRSVAAFGGHGVLIPQRRSASVTAVAWRTSAGAAARTPVARATNLTRALKQWADAGLQVVGLDADGDTT-VDQIDGAGPIVVVVGSEGKGLSRLVRENCDAVVSIP 286
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: Y5122_MYCSJ (Uncharacterized tRNA/rRNA methyltransferase Mjls_5122 OS=Mycobacterium sp. (strain JLS) GN=Mjls_5122 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 4.074e-20 Identity = 59/170 (34.71%), Postives = 92/170 (54.12%), Query Frame = 2 Query: 2 IKETSKHDLNMVVGNRPHQGLVLDASPLEMVKIKELDPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 511 I E + DL+ + N HQGL L P + +L + + +L VALD ++DP+NLGAI+RS FG GV++ + SA ++ V + SAG+ + + N+ + L S A+ G +V+G L+E+ P ++V+GSEG GL LV +C +V IP Sbjct: 119 ILEVPRSDLDRMSNNALHQGLGLQVPPYDYAHPDDLLATAKADGAPALLVALDNISDPRNLGAIVRSVAAFGGHGVLIPQRRSASVTAVAWRTSAGAAARLPVARATNLNRTLKSWADGGLQVVGLDADGDTT-LDELDGTGPVVVVVGSEGKGLSRLVRENCDAVVSIP 287 The following BLAST results are available for this feature:
BLAST of EY684787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684787 ID=EY684787; Name=EY684787; organism=Citrus sinensis; type=EST; length=917bpback to top |