EY684783
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY684783 vs. ExPASy Swiss-Prot
Match: U2A2B_ARATH (Splicing factor U2af large subunit B OS=Arabidopsis thaliana GN=U2AF65B PE=2 SV=2) HSP 1 Score: 278.485 bits (711), Expect = 3.593e-74 Identity = 131/163 (80.37%), Postives = 149/163 (91.41%), Query Frame = 1 Query: 1 PLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETHIKELVEAFGTLHGFDLVKDRDTGNSKGYGFCVYPNP 489 P ANEQ+++TFFSQVM+AIGGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAMALDGII EGV V+VRRPTDYNP+LAA LGP QP+PNLNL AVGL+SG+ GG EGPDR+FVGGLPYYFTE I+EL+E+FG L GF+LVKDR+TGNSKGY FCVY +P Sbjct: 264 PTANEQSVSTFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIILEGVPVKVRRPTDYNPSLAATLGPSQPNPNLNLGAVGLSSGSTGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDP 426
BLAST of EY684783 vs. ExPASy Swiss-Prot
Match: U2A2A_ARATH (Splicing factor U2af large subunit A OS=Arabidopsis thaliana GN=U2AF65A PE=2 SV=2) HSP 1 Score: 274.633 bits (701), Expect = 5.188e-73 Identity = 129/160 (80.62%), Postives = 146/160 (91.25%), Query Frame = 1 Query: 1 PLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETHIKELVEAFGTLHGFDLVKDRDTGNSKGYGFCVY 480 P ANEQ++ATFFSQVM A+GGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAM+LDGIIFEG V+VRRP+DYNP+LAA LGP QPSP+LNLAAVGL GA GG EGPDR+FVGGLPYYFTE+ ++EL+E+FG L GFDLVKDR+TGNSKGY FCVY Sbjct: 248 PTANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVY 407
BLAST of EY684783 vs. ExPASy Swiss-Prot
Match: U2A2B_ORYSJ (Splicing factor U2af large subunit B OS=Oryza sativa subsp. japonica GN=U2AF65B PE=2 SV=2) HSP 1 Score: 273.092 bits (697), Expect = 1.510e-72 Identity = 127/160 (79.38%), Postives = 145/160 (90.62%), Query Frame = 1 Query: 1 PLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETHIKELVEAFGTLHGFDLVKDRDTGNSKGYGFCVY 480 P ANEQ++A +F+QVM AIGGN+AGPGDAV+NVYINH+KKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNP+LAAALGP QPSPNLNLAAVGL G+ GG EGPDR+FVGGLPYYFTE ++EL+E+FG L GFDLVKDR+TGNSKGY FCVY Sbjct: 223 PTANEQSVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGILFEGAPVKVRRPTDYNPSLAAALGPSQPSPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 382
BLAST of EY684783 vs. ExPASy Swiss-Prot
Match: U2A2A_NICPL (Splicing factor U2af large subunit A OS=Nicotiana plumbaginifolia GN=U2AF65A PE=2 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 4.392e-72 Identity = 129/160 (80.62%), Postives = 144/160 (90.00%), Query Frame = 1 Query: 1 PLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETHIKELVEAFGTLHGFDLVKDRDTGNSKGYGFCVY 480 P ANEQ++ATFFS VM AIGGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAMALDG+IFEG V+VRRP+DYNP+LAA LGP QPSPNLNLAAVG G+ GG EGPDR+FVGGLPYYFTE+ I+EL+E+FG L GFDLVKDR+TGNSKGY FCVY Sbjct: 230 PTANEQSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGSTPGSSGGLEGPDRIFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVY 389
BLAST of EY684783 vs. ExPASy Swiss-Prot
Match: U2A2B_WHEAT (Splicing factor U2af large subunit B OS=Triticum aestivum GN=U2AF65B PE=2 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 1.669e-71 Identity = 126/160 (78.75%), Postives = 144/160 (90.00%), Query Frame = 1 Query: 1 PLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETHIKELVEAFGTLHGFDLVKDRDTGNSKGYGFCVY 480 P ANEQ++A +F+QVM AIGGN+AGPGDAV+NVYINH+KKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNP+LAAALGP QPS NLNLAAVGL G+ GG EGPDR+FVGGLPYYFTE ++EL+E+FG L GFDLVKDR+TGNSKGY FCVY Sbjct: 216 PSANEQSVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGILFEGAPVKVRRPTDYNPSLAAALGPSQPSSNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 375
BLAST of EY684783 vs. ExPASy Swiss-Prot
Match: U2A2B_NICPL (Splicing factor U2af large subunit B OS=Nicotiana plumbaginifolia GN=U2AF65B PE=2 SV=1) HSP 1 Score: 269.24 bits (687), Expect = 2.180e-71 Identity = 127/158 (80.38%), Postives = 144/158 (91.14%), Query Frame = 1 Query: 7 ANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETHIKELVEAFGTLHGFDLVKDRDTGNSKGYGFCVY 480 ANEQ++ATFFS VM+AIGGN+AGPGDAVVNVYIN+EKKFAFVEMR+VEEASNAMALDGIIFEG +VRRP+DYNP+LAA LGP QP+PNLNLAAVGL+ G+ GG EGPDR+FVGGLPYYFTE I+EL+E+FG L GFDLVKDR+TGNSKGY FCVY Sbjct: 250 ANEQSVATFFSHVMSAIGGNTAGPGDAVVNVYINYEKKFAFVEMRSVEEASNAMALDGIIFEGAPCKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLSPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 407
BLAST of EY684783 vs. ExPASy Swiss-Prot
Match: U2A2A_ORYSJ (Splicing factor U2af large subunit A OS=Oryza sativa subsp. japonica GN=U2AF65A PE=2 SV=2) HSP 1 Score: 269.24 bits (687), Expect = 2.180e-71 Identity = 124/160 (77.50%), Postives = 143/160 (89.38%), Query Frame = 1 Query: 1 PLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETHIKELVEAFGTLHGFDLVKDRDTGNSKGYGFCVY 480 P ANE +A +F+QVM A+GGN+AGPGDAV+NVYINH+KKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNP+LAAALGP QP+PNLNLAAVGL G+ GG EGPDR+FVGGLPYYFTE ++EL+E+FG L GFDLVKDR+TGNSKGY FCVY Sbjct: 247 PTANEHTVAVYFNQVMAAVGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 406
BLAST of EY684783 vs. ExPASy Swiss-Prot
Match: U2A2A_WHEAT (Splicing factor U2af large subunit A OS=Triticum aestivum GN=U2AF65A PE=2 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 5.025e-68 Identity = 121/160 (75.62%), Postives = 139/160 (86.88%), Query Frame = 1 Query: 1 PLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETHIKELVEAFGTLHGFDLVKDRDTGNSKGYGFCVY 480 P+ANEQ +A FF+QVM AIGGN+ G AVVNVYINH+KKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNP+ AAALGP QP+PNLNLAAVGL GA GG EGPDR+FVGGLPYYFTE ++EL+E FG L GFD+VKD++TGNSKGY FC+Y Sbjct: 281 PIANEQTVAVFFNQVMAAIGGNTFALGHAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSQAAALGPSQPNPNLNLAAVGLTPGAGGGLEGPDRIFVGGLPYYFTEAQVRELLETFGPLRGFDIVKDKETGNSKGYAFCLY 440
BLAST of EY684783 vs. ExPASy Swiss-Prot
Match: U2AF2_MOUSE (Splicing factor U2AF 65 kDa subunit OS=Mus musculus GN=U2af2 PE=1 SV=3) HSP 1 Score: 126.716 bits (317), Expect = 1.747e-28 Identity = 68/156 (43.59%), Postives = 98/156 (62.82%), Query Frame = 1 Query: 13 EQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETHIKELVEAFGTLHGFDLVKDRDTGNSKGYGFCVY 480 E+A+ FF+ M +GG + PG+ V+ V IN +K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++ G+ S + + ++F+GGLP Y + +KEL+ +FG L F+LVKD TG SKGY FC Y Sbjct: 162 EEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVPGVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEY 307
BLAST of EY684783 vs. ExPASy Swiss-Prot
Match: U2AF2_HUMAN (Splicing factor U2AF 65 kDa subunit OS=Homo sapiens GN=U2AF2 PE=1 SV=4) HSP 1 Score: 126.716 bits (317), Expect = 1.747e-28 Identity = 68/156 (43.59%), Postives = 98/156 (62.82%), Query Frame = 1 Query: 13 EQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETHIKELVEAFGTLHGFDLVKDRDTGNSKGYGFCVY 480 E+A+ FF+ M +GG + PG+ V+ V IN +K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++ G+ S + + ++F+GGLP Y + +KEL+ +FG L F+LVKD TG SKGY FC Y Sbjct: 162 EEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVPGVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEY 307 The following BLAST results are available for this feature:
BLAST of EY684783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684783 ID=EY684783; Name=EY684783; organism=Citrus sinensis; type=EST; length=891bpback to top |