EY684773

Overview
NameEY684773
Unique NameEY684773
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length767
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684773 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.678e-26
Identity = 75/143 (52.45%), Postives = 94/143 (65.73%), Query Frame = -1
Query:  294 LWFLRRRDAPGKFKERGVCPFAGPLLVITESFLWFSIV*MLL-GCAGIPH*FPAWGKLVKPDQFKAHK**RECLMYQRPIYEGANCTFIFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 719
            ++ L++++ P KFK +G   F    L + ES   F  +   L G   +    P  G++VKPDQFKA        MYQRP  +G      F+V+FP+SL+P+QCK LE VLPPRTSVQL+DMELDECEETTLHDVNIEEEMRRK
Sbjct:  252 VFVLQQKEHP-KFKRKGDDLFVEHTLSLVESLCGFQFILTHLDGRQLLIKSLP--GEVVKPDQFKAIND-EGMPMYQRPFMKG-KLYIHFSVEFPDSLNPEQCKALEGVLPPRTSVQLSDMELDECEETTLHDVNIEEEMRRK 389          
BLAST of EY684773 vs. ExPASy Swiss-Prot
Match: DNJH1_ALLPO (DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.018e-23
Identity = 71/143 (49.65%), Postives = 91/143 (63.64%), Query Frame = -1
Query:  294 LWFLRRRDAPGKFKERGVCPFAGPLLVITESFLWFSIV*MLL-GCAGIPH*FPAWGKLVKPDQFKAHK**RECLMYQRPIYEGANCTFIFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 719
            ++ L++++ P KF+ +G   F    L +TE+   F  V   L G   +    P  G++VKPDQFKA        MYQRP   G      F VDFP+SL+PDQCK++E+VLP   S QLTDME+DECEETT+HDVNIEEEMRRK
Sbjct:  233 VFVLQQKEHP-KFQRKGDDLFYKHTLSLTEALCGFQFVLTHLDGRQLLIKSNP--GEVVKPDQFKAIND-EGMPMYQRPFMRG-KLYIQFLVDFPDSLTPDQCKVIESVLPRSASSQLTDMEIDECEETTMHDVNIEEEMRRK 370          
BLAST of EY684773 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.736e-23
Identity = 69/147 (46.94%), Postives = 90/147 (61.22%), Query Frame = -1
Query:  294 LWFLRRRDAPGKFKERGVCPFAGPLLVITESFLWFSIV*MLLGCAGI-----PH*FPAWGKLVKPDQFKAHK**RECLMYQRPIYEGANCTFIFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 719
            ++ L++++ P KFK +G   F    L +TE+   F  V   L    +     P      G+++KPDQFK         MYQRP   G      F+VDFP+SL+PDQCK LE+VLP R + +LTDME+DECEETT+HDVNIEEEMRRK
Sbjct:  254 VFVLQQKEHP-KFKRKGDDLFYEHSLSLTEALCGFQFVLTHLDNRQLLIKSNP------GEVIKPDQFKGIND-EGMPMYQRPFMRG-KLYIHFSVDFPDSLTPDQCKALESVLPSRNASRLTDMEIDECEETTMHDVNIEEEMRRK 391          
BLAST of EY684773 vs. ExPASy Swiss-Prot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.275e-22
Identity = 68/143 (47.55%), Postives = 91/143 (63.64%), Query Frame = -1
Query:  294 LWFLRRRDAPGKFKERGVCPFAGPLLVITESFLWFSIV*MLLGCAGIPH*FPA-WGKLVKPDQFKAHK**RECLMYQRPIYEGANCTFIFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 719
            ++ L++++ P KFK +G   F    L +TE+   F  V  L    G      +  G++VKPDQFKA +      +YQRP  +G      FTV+FP+SL+PDQ K LE +LPP+ S+ LT MELDECEETTLH+VNIEEEM+RK
Sbjct:  254 VFVLQQKEHP-KFKRKGEDLFYEHTLSLTEALCGFRFV--LTHLDGRQLLIKSNLGEVVKPDQFKAIED-EGMPIYQRPFMKG-KMYIHFTVEFPDSLNPDQVKSLEAILPPKPSMSLTYMELDECEETTLHNVNIEEEMKRK 391          
BLAST of EY684773 vs. ExPASy Swiss-Prot
Match: DNAJ3_ARATH (Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 3.275e-22
Identity = 68/143 (47.55%), Postives = 91/143 (63.64%), Query Frame = -1
Query:  294 LWFLRRRDAPGKFKERGVCPFAGPLLVITESFLWFSIV*MLL-GCAGIPH*FPAWGKLVKPDQFKAHK**RECLMYQRPIYEGANCTFIFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 719
            ++ L++++ P KFK +G   F    L +TE+   F  V   L G + +    P  G++VKPD +KA        +YQRP  +G      FTV+FP+SLSPDQ K LE VLP  ++ QL+DME+DECEETTLHDVNIE+EMRRK
Sbjct:  254 VFVLQQKEHP-KFKRKGEDLFVEHTLSLTEALCGFQFVLTHLDGRSLLIKSNP--GEVVKPDSYKAISD-EGMPIYQRPFMKG-KLYIHFTVEFPDSLSPDQTKALEAVLPKPSTAQLSDMEIDECEETTLHDVNIEDEMRRK 391          
BLAST of EY684773 vs. ExPASy Swiss-Prot
Match: DNAJ2_ARATH (Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 4.003e-20
Identity = 61/142 (42.96%), Postives = 86/142 (60.56%), Query Frame = -1
Query:  294 LWFLRRRDAPGKFKERGVCPFAGPLLVITESFLWFSIV*MLLGCAGIPH*FPAWGKLVKPDQFKAHK**RECLMYQRPIYEGANCTFIFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 719
            ++ +++++ P KFK +G   F    + +TE+   F  V   L    +       G++VKPD +KA        +YQRP  +G      FTV+FPESLSPDQ K +E VLP  T   ++DME+D+CEETTLHDVNIE+EM+RK
Sbjct:  255 VFVIQQKEHP-KFKRKGEDLFVEHTISLTEALCGFQFVLTHLDKRQLLIKSKP-GEVVKPDSYKAISD-EGMPIYQRPFMKG-KLYIHFTVEFPESLSPDQTKAIEAVLPKPTKAAISDMEIDDCEETTLHDVNIEDEMKRK 392          
The following BLAST results are available for this feature:
BLAST of EY684773 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
DNJH_CUCSA1.678e-2652.45DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P... [more]
DNJH1_ALLPO1.018e-2349.65DnaJ protein homolog 1 (Fragment) OS=Allium porrum... [more]
DNJH2_ALLPO1.736e-2346.94DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE... [more]
DNJH_ATRNU3.275e-2247.55DnaJ protein homolog ANJ1 OS=Atriplex nummularia P... [more]
DNAJ3_ARATH3.275e-2247.55Chaperone protein dnaJ 3 OS=Arabidopsis thaliana G... [more]
DNAJ2_ARATH4.003e-2042.96Chaperone protein dnaJ 2 OS=Arabidopsis thaliana G... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-003-E02-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684773 ID=EY684773; Name=EY684773; organism=Citrus sinensis; type=EST; length=767bp
GACACTAAAAATATTAATTATGAGCATTGAGTCTGAAGGTGCAACGCTAG
AATTCCATTACATAGTCGGTTATCAAAAAAACTGTAAGAATAAAGACAGA
CAAACCAAAACTAAAACCTCTAAAGCCTATAACAGAAAATAAATATGTTG
AGAATCTTTTTCTCCCAAACAATGAAAATACTAAATCAGGCCACCCCTTT
TCTTCTACATCATCACTGCTGAGCACACTGCACTCTCTGGGCACCACCTT
GCATATCGTCATCTTCATCGTATGCCTCCTGAGCTGCTTGTTGCTTCCTT
CGCATTTCCTCCTCAATGTTCACATCATGCAGGGTTGTTTCTTCACACTC
ATCCAGTTCCATATCGGTGAGCTGGACTGAGGTCCTTGGAGGTAGTACGG
TCTCCAGCATCTTGCACTGGTCTGGGCTCAGTGACTCAGGGAAGTCAACA
GTGAAAATGAATGTACAGTTTGCCCCCTCATAAATGGGCCTCTGATACAT
AAGGCATTCCCTTCATCATTTATGGGCCTTGAATTGGTCCGGCTTGACTA
ACTTCCCCCAGGCTGGAAATTAATGAGGAATTCCCGCGCATCCCAATAAC
ATTTAAACAATTGAAAACCACAAAAAGCTTTCTGTAATAACAAGGAGGGG
CCCAGCAAAAGGGCATACCCCCCTTTCCTTGAATTTGCCGGGCGCGTCTC
GGCGGCGGAGGAACCACAGGGACGCGACCGCCCGCAGGCGGACGCCAGCA
CTAGGACCCAACAGGGG
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