EY684671

Overview
NameEY684671
Unique NameEY684671
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length799
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684671 vs. ExPASy Swiss-Prot
Match: ADLO1_ARATH (Protein ARABIDILLO 1 OS=Arabidopsis thaliana GN=FBX5 PE=1 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.814e-71
Identity = 145/227 (63.88%), Postives = 170/227 (74.89%), Query Frame = 3
Query:   15 NLAFNPGNALCIVEDGGVQALIHLCSSSLSKMARFMAALALAYIVDGRMEDIASIGSSLEGTSESENLDVIRRMALKHIEDFVLGTSESENLDVLRRMALKHIEDFVRSFSDPQTFATALVSAVPTSLAQITEGARIPEAAHLRCSGAEIGRFVSMLRNPSSILKACAAFALLQFTMPGGRHSMHHTNLLQNVGAPRVLQSTSAAAIAPVEAKIFAKIVLRNLKHHQ 695
            NLAFNPGNAL IVE+GGV AL+HLCSSS+SKMARFMAALALAY+ DGRM++ A     + GTS SE+                  TS++ +LD  R MALKHIE FV SF DP  F + +VS+ PT LAQ+TE ARI EA HLRCSGAEIGRFV+MLRNP S LKACAAFALLQFT+PGGRH+MHH +L+QN G  R L+S +A+A  P EAKIF KI+LRNL+HHQ
Sbjct:  721 NLAFNPGNALRIVEEGGVPALVHLCSSSVSKMARFMAALALAYMFDGRMDEYAL----MIGTSSSES------------------TSKNISLDGARNMALKHIEAFVLSFIDPHIFESPVVSSTPTMLAQVTERARIQEAGHLRCSGAEIGRFVTMLRNPDSTLKACAAFALLQFTIPGGRHAMHHVSLMQNGGESRFLRSAAASAKTPREAKIFTKILLRNLEHHQ 925          
BLAST of EY684671 vs. ExPASy Swiss-Prot
Match: ADLO2_ARATH (Protein ARABIDILLO 2 OS=Arabidopsis thaliana GN=At3g60350 PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.537e-65
Identity = 132/227 (58.15%), Postives = 164/227 (72.25%), Query Frame = 3
Query:   15 NLAFNPGNALCIVEDGGVQALIHLCSSSLSKMARFMAALALAYIVDGRMEDIASIGSSLEGTSESENLDVIRRMALKHIEDFVLGTSESENLDVLRRMALKHIEDFVRSFSDPQTFATALVSAVPTSLAQITEGARIPEAAHLRCSGAEIGRFVSMLRNPSSILKACAAFALLQFTMPGGRHSMHHTNLLQNVGAPRVLQSTSAAAIAPVEAKIFAKIVLRNLKHHQ 695
            NL+FNPGNAL IVE+GGV AL+ LCSSS+SKMARFMAALALAY+ DGRM++ A IG+SLE TS+S  L+  R MA                        L  I+ F+++F + Q F+T  +S+ P+ LAQ++E ARIPEA HLRCSG+EIGRFV+MLRNP  +L+ACAAFALLQFT+P  RH+MHH +L+QN G  R L+S +AAA  P EAKIF KIVLRNL+H Q
Sbjct:  712 NLSFNPGNALRIVEEGGVVALVQLCSSSVSKMARFMAALALAYMFDGRMDEYAMIGTSLESTSKSVTLNGARTMA------------------------LDQIKAFIKTFMEHQIFSTGALSSAPSMLAQVSERARIPEAGHLRCSGSEIGRFVTMLRNPCLVLRACAAFALLQFTIPESRHAMHHASLMQNAGEARGLRSAAAAASMPREAKIFMKIVLRNLEHQQ 914          
The following BLAST results are available for this feature:
BLAST of EY684671 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ADLO1_ARATH1.814e-7163.88Protein ARABIDILLO 1 OS=Arabidopsis thaliana GN=FB... [more]
ADLO2_ARATH2.537e-6558.15Protein ARABIDILLO 2 OS=Arabidopsis thaliana GN=At... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-002-A07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684671 ID=EY684671; Name=EY684671; organism=Citrus sinensis; type=EST; length=799bp
CCCACGCGTCCGGGAATCTGGCCTTCAATCCTGGTAATGCTCTCTGTATA
GTGGAGGATGGCGGTGTGCAGGCACTTATTCATCTGTGCTCATCATCACT
GTCAAAAATGGCACGTTTTATGGCTGCATTGGCACTGGCATATATAGTCG
ATGGGAGAATGGAGGACATTGCATCAATTGGATCTTCCTTGGAGGGTACT
TCTGAGAGTGAGAATTTAGATGTAATTAGAAGAATGGCCTTGAAGCATAT
TGAAGATTTTGTGCTGGGTACTTCTGAGAGTGAGAATTTAGATGTACTTA
GAAGAATGGCCTTGAAGCATATTGAAGATTTTGTGCGCTCATTTTCTGAT
CCACAAACCTTTGCCACGGCACTTGTGTCAGCAGTCCCCACATCTCTTGC
ACAAATAACCGAAGGAGCCCGGATACCAGAAGCAGCACATCTGAGATGCA
GTGGTGCTGAGATTGGAAGATTCGTCTCTATGTTAAGGAACCCTTCATCC
ATACTCAAGGCCTGTGCAGCATTTGCTCTTCTCCAGTTTACCATGCCAGG
AGGACGGCATTCAATGCACCACACGAACCTGTTGCAAAATGTGGGAGCAC
CAAGGGTCTTGCAAAGTACTTCTGCAGCTGCCATTGCCCCTGTTGAAGCC
AAAATCTTTGCAAAGATTGTACTTCGCAACCTTAAGCACCACCAGAACCA
GCATGTAAAGGCTTCCAATTAAGACCCAAGGAAATTTAGGAAGCTTCAAA
GTTTTCTTGGTTGTACCTTGGGTGTTGGCTTATCTATTTTTTCAAACTT
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