EY684653

Overview
NameEY684653
Unique NameEY684653
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY684653 vs. ExPASy Swiss-Prot
Match: MTPC3_ARATH (Putative metal tolerance protein C3 OS=Arabidopsis thaliana GN=MTPC3 PE=3 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.400e-32
Identity = 71/107 (66.36%), Postives = 83/107 (77.57%), Query Frame = 2 
Query:   14 IRTWSMTVLENVNSLVGRSAAPEYLQKLTYLCWNHH-KSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEHA 331
            I  WS TV+EN  SL+G+SA PE LQKLTYL       +I+H+DTVRAYTFG  YFVEVDI LP  +PL+EAH IGESLQ KLE LPE+ERAFVHLD+E  H+PEH+
Sbjct:  296 IVNWSGTVMENAVSLIGQSAPPEVLQKLTYLVMRQGGDNIKHVDTVRAYTFGVLYFVEVDIELPEDLPLKEAHAIGESLQIKLEELPEVERAFVHLDFECHHKPEHS 402
The following BLAST results are available for this feature:
BLAST of EY684653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MTPC3_ARATH1.400e-3266.36Putative metal tolerance protein C3 OS=Arabidopsis... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-015-G05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684653 ID=EY684653; Name=EY684653; organism=Citrus sinensis; type=EST; length=721bp
CCACGCGTCCGCCATCCGCACATGGTCAATGACAGTGTTGGAAAATGTGA
ACTCCCTTGTTGGAAGATCAGCTGCTCCAGAATATCTACAAAAGCTCACG
TACCTCTGCTGGAACCACCACAAGTCCATAAGACATATTGACACAGTCCG
AGCTTACACATTTGGGTCTCACTACTTTGTGGAGGTTGACATTGTGCTGC
CAGCAAGCATGCCCTTGCAAGAGGCCCATGACATCGGTGAGTCCTTGCAG
GAGAAGCTCGAGCTTCTGCCAGAGATTGAGCGCGCCTTTGTTCATCTTGA
TTACGAGTACACTCACAGACCTGAGCATGCTCAAGCACACTACTAGGAAC
TGTAGAATATTCTGATGTTGTATTTATTATCATCTTGTTGGTGCTTTTTG
TTGCCACCCTACAAGTCCAATTATTAATTATCCACGAAAATCAAGCCTTG
TGAAAGATAGATTGTCATTGACAAGATTATTTGCACATATTTTAGTAATT
TAAGTTCTATTACACGATCAGCAGAGAGTTCTGGGGAGCTAAGATTAGTC
GAAAATGGCTCTTGGGCTTTGTTGATGGAAGTGCTGAATTAGTAATGTGC
TTGGTTAAGTTTGGGCTGTTTAGCCCAATGTGACGTGACTTTTTCTTTTC
CCCTTTTTTGCCCGAAGTTAAAAAAAAATCTTCTTGTGGTATTCCAAAAA
AAACAAAAAAAAAAAAAAGGC
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