EY684633

Overview
NameEY684633
Unique NameEY684633
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY684633 vs. ExPASy Swiss-Prot
Match: UPP_ARATH (Uracil phosphoribosyltransferase OS=Arabidopsis thaliana GN=UPT1 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.574e-13
Identity = 45/87 (51.72%), Postives = 48/87 (55.17%), Query Frame = 1 
Query:   31 SGESMENALRAXXXXXXXXXXLIHREGDNGQQVCKVLPMSRMCFFVSAKVLIFYGSMIWQLIYEKLPQDISERHVLLLDPILGTGST 291
            SGESMENALRA          LIHREGDNGQQ                            L+YEKLP DISERHVLLLDPILGTG++
Sbjct:   66 SGESMENALRACCKGIKIGKILIHREGDNGQQ----------------------------LVYEKLPNDISERHVLLLDPILGTGNS 124
The following BLAST results are available for this feature:
BLAST of EY684633 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
UPP_ARATH2.574e-1351.72Uracil phosphoribosyltransferase OS=Arabidopsis th... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-015-E05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684633 ID=EY684633; Name=EY684633; organism=Citrus sinensis; type=EST; length=866bp
CCACGCGTCCGCGGACGCGTGGGCGATTCAAGTGGTGAGAGTATGGAGAA
TGCTTTGCGAGCTTGTTGTAAAGGTATCAAGATTGGGAAGATCTTAATTC
ATAGAGAAGGGGACAATGGTCAACAGGTTTGCAAAGTTCTTCCAATGTCT
AGAATGTGCTTTTTTGTGTCTGCTAAAGTTTTGATTTTTTATGGTTCAAT
GATTTGGCAGTTAATCTATGAAAAATTACCGCAAGACATCTCAGAAAGGC
ATGTGTTACTATTGGATCCTATTCTAGGCACAGGTTCGACTGATTTGATG
TGCTTTTTATGTTTTCAGCTTGTGCATCGCCTTAATTAGTTCTGTTTTAA
CATAGATAATCAATAACTTCTGCAAAAGTATTAGTTGTTAGTATTTATGC
AGTCCTTAACTCATGTATCTTTTACTCTTCCTAATTGTCCTTGCTCCCTT
AAGCAAGTTATTTGCAACTCATGTCTCATGACCTTAAAAATATTTGCTTG
CTTTTAGGTATCTGTAACTTGTTTCTCTTAAAAGCTAATTGGACATTTAG
TAGCCAAGTGGCTGGAATTAACTTAATATAGTTATCATTCCCTTCATTCA
GGCAACTCNGCTGTTCAAGCTATTTCTTTACTTCTAAGAAAAGGTGTACC
AGAGTCCAACATCATATTTCTGAATCTCATATCTGTAAGTAATTTTAATA
TCCTTTTAGTGTTTCTATGGATATTTTCTCATCCGCACTTTCTGTCTCTG
AATCTCCCCAAGCACCTCCAGGGTGTGCATGTGGGTTTGCAAAAACTTCC
CCAGACTAAAGATTGGGACTTCCGGAAATTGAAATTGGCTTGAAATGAAA
ATTCCCGGGGCATACC
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