EY684555
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDHC2_ARATH (Malate dehydrogenase, cytoplasmic 2 OS=Arabidopsis thaliana GN=At5g43330 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 5.749e-62 Identity = 84/111 (75.68%), Postives = 91/111 (81.98%), Query Frame = 2 Query: 266 LNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKDLTYPC 598 LNGEFI+TVQQRGAAIIKARK CDHIRDWV+GTPEGT+VSMG YSDGSYNVP G IYSFP TCRNGEWTIVQGL ID++ +KK+DLTAEEL EEKDL Y C Sbjct: 220 LNGEFISTVQQRGAAIIKARKLSSALSAASSACDHIRDWVVGTPEGTFVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLPIDDASRKKMDLTAEELKEEKDLAYSC 330 HSP 2 Score: 85.8853 bits (211), Expect = 5.749e-62 Identity = 41/52 (78.85%), Postives = 44/52 (84.62%), Query Frame = 1 Query: 118 RTRVPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDACVEW 273 R VPVSDVKNVIIWGNHSS+ YPDVNHATV T+ GEKPVRELVK+D EW Sbjct: 171 RLSVPVSDVKNVIIWGNHSSTQYPDVNHATVKTSVGEKPVRELVKND---EW 219
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDHC1_ARATH (Malate dehydrogenase, cytoplasmic 1 OS=Arabidopsis thaliana GN=At1g04410 PE=1 SV=2) HSP 1 Score: 168.703 bits (426), Expect = 4.802e-61 Identity = 82/111 (73.87%), Postives = 90/111 (81.08%), Query Frame = 2 Query: 266 LNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKDLTYPC 598 L+GEFI+TVQQRGAAIIKARK CDHIRDWVLGTPEGT+VSMG YSDGSY+VP G IYSFP TCRNG+W+IVQGL IDE +KK+DLTAEEL EEKDL Y C Sbjct: 220 LDGEFISTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYSVPSGLIYSFPVTCRNGDWSIVQGLPIDEVSRKKMDLTAEELKEEKDLAYSC 330 HSP 2 Score: 88.1965 bits (217), Expect = 4.802e-61 Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 1 Query: 118 RTRVPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDACVE 270 R VPVSDVKNVIIWGNHSSS YPDVNHA V T++GEKPVRELVKDDA ++ Sbjct: 171 RLSVPVSDVKNVIIWGNHSSSQYPDVNHAKVQTSSGEKPVRELVKDDAWLD 221
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDHC_MEDSA (Malate dehydrogenase, cytoplasmic OS=Medicago sativa GN=CMDH PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.360e-60 Identity = 83/111 (74.77%), Postives = 90/111 (81.08%), Query Frame = 2 Query: 266 LNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKDLTYPC 598 LNGEFI+TVQQRGAAIIKARK CDHIRDWVLGTP+GT+VSMG YSDGSYNVP G IYSFP TC NGEW IVQGLSIDE +KKLDLTAEEL+EEK+L + C Sbjct: 220 LNGEFISTVQQRGAAIIKARKLSSALSAASAACDHIRDWVLGTPQGTFVSMGVYSDGSYNVPSGLIYSFPVTCANGEWKIVQGLSIDEFSRKKLDLTAEELTEEKNLAHSC 330 HSP 2 Score: 85.8853 bits (211), Expect = 2.360e-60 Identity = 40/48 (83.33%), Postives = 42/48 (87.50%), Query Frame = 1 Query: 118 RTRVPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDA 261 R V VSDVKNVIIWGNHSS+ YPDVNHATVNT AGEKPVR+LV DDA Sbjct: 171 RLNVQVSDVKNVIIWGNHSSTQYPDVNHATVNTPAGEKPVRQLVSDDA 218
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDHC_MESCR (Malate dehydrogenase, cytoplasmic OS=Mesembryanthemum crystallinum GN=MDH PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.797e-58 Identity = 82/111 (73.87%), Postives = 86/111 (77.48%), Query Frame = 2 Query: 266 LNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKDLTYPC 598 LNGEFITTVQQRGAAIIKARK CDHI DWVLGTPEGTWVSMG YSDGSYNVP G IYSFP TC+NGEWTIVQGL ID+ +KK+D TA EL EEK L Y C Sbjct: 220 LNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIHDWVLGTPEGTWVSMGVYSDGSYNVPAGIIYSFPVTCKNGEWTIVQGLPIDDDSRKKMDATAAELVEEKTLAYSC 330 HSP 2 Score: 78.1814 bits (191), Expect = 2.797e-58 Identity = 37/48 (77.08%), Postives = 39/48 (81.25%), Query Frame = 1 Query: 118 RTRVPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDA 261 R V VSDVKNVIIWGNHSS+ YPDVNHATV T +KPVRELV DDA Sbjct: 171 RLNVQVSDVKNVIIWGNHSSTQYPDVNHATVKTQGVDKPVRELVADDA 218
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDHC_MAIZE (Malate dehydrogenase, cytoplasmic OS=Zea mays PE=2 SV=2) HSP 1 Score: 162.155 bits (409), Expect = 6.198e-58 Identity = 80/111 (72.07%), Postives = 85/111 (76.58%), Query Frame = 2 Query: 266 LNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKDLTYPC 598 LNGEFITTVQQRGAAIIKARK CDHIRDWVLGTPEGT+VSMG YSDGSY VP G IYSFP TC GEW IVQGL IDE +KK+D TA+EL+EEK L Y C Sbjct: 220 LNGEFITTVQQRGAAIIKARKFSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYGVPSGLIYSFPVTCSGGEWKIVQGLPIDEFSRKKMDATAQELTEEKTLAYSC 330 HSP 2 Score: 84.3445 bits (207), Expect = 6.198e-58 Identity = 41/52 (78.85%), Postives = 42/52 (80.77%), Query Frame = 1 Query: 118 RTRVPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDACVEW 273 R V VSDVKNVIIWGNHSSS YPDVNHATV T+ GEKPVRELV DD EW Sbjct: 171 RLNVQVSDVKNVIIWGNHSSSQYPDVNHATVKTSTGEKPVRELVSDD---EW 219
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDHC_ORYSJ (Malate dehydrogenase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os10g0478200 PE=1 SV=3) HSP 1 Score: 160.999 bits (406), Expect = 7.338e-56 Identity = 80/111 (72.07%), Postives = 85/111 (76.58%), Query Frame = 2 Query: 266 LNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKDLTYPC 598 LN EFI+TVQQRGAAIIKARK CDHIRDWVLGTPEGT+VSMG YSDGSY VP G IYSFP TC GEWTIVQGL IDE +KK+D TA+ELSEEK L Y C Sbjct: 220 LNTEFISTVQQRGAAIIKARKQSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYGVPAGLIYSFPVTCSGGEWTIVQGLPIDEFSRKKMDATAQELSEEKTLAYSC 330 HSP 2 Score: 78.5666 bits (192), Expect = 7.338e-56 Identity = 37/52 (71.15%), Postives = 41/52 (78.85%), Query Frame = 1 Query: 118 RTRVPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDACVEW 273 + V V+DVKN IIWGNHSS+ YPDVNHATV T +GEKPVRELV DD EW Sbjct: 171 KLNVQVTDVKNAIIWGNHSSTQYPDVNHATVKTPSGEKPVRELVADD---EW 219
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDHC_BETVU (Malate dehydrogenase, cytoplasmic OS=Beta vulgaris GN=NR1 PE=1 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 1.247e-55 Identity = 80/111 (72.07%), Postives = 85/111 (76.58%), Query Frame = 2 Query: 266 LNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDGSYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKDLTYPC 598 LNGEFITTVQQRGAAIIKARK CDHIRDWVLGTPEGTWVSMG YSDGSYNVP G IYSFP TC++GEW IVQGL IDE ++K+D T EL EEK L Y C Sbjct: 220 LNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGIIYSFPVTCKDGEWKIVQGLPIDEVSRQKMDATGAELVEEKALAYSC 330 HSP 2 Score: 74.7146 bits (182), Expect = 1.247e-55 Identity = 36/48 (75.00%), Postives = 37/48 (77.08%), Query Frame = 1 Query: 118 RTRVPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDA 261 R VSDVKNVIIWGNHSSS YPDVN TV T +GEK VRELV DDA Sbjct: 171 RLNAQVSDVKNVIIWGNHSSSQYPDVNPCTVKTGSGEKAVRELVADDA 218
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDHC_PIG (Malate dehydrogenase, cytoplasmic OS=Sus scrofa GN=MDH1 PE=1 SV=4) HSP 1 Score: 118.242 bits (295), Expect = 4.970e-38 Identity = 61/110 (55.45%), Postives = 77/110 (70.00%), Query Frame = 2 Query: 266 LNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDG-SYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKDLTY 592 L GEFITTVQQRGAA+IKARK CDH+RD GTPEG +VSMG SDG SY VP +YSFP T ++ W IV+GL I++ ++K+DLTA+EL+EEK+ + Sbjct: 219 LKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNSYGVPDDLLYSFPVTIKDKTWKIVEGLPINDFSREKMDLTAKELAEEKETAF 328 HSP 2 Score: 61.6178 bits (148), Expect = 4.970e-38 Identity = 30/45 (66.67%), Postives = 32/45 (71.11%), Query Frame = 1 Query: 127 VPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDA 261 V DVKNVIIWGNHSS+ YPDVNHA V A E V E VKDD+ Sbjct: 173 VTSDDVKNVIIWGNHSSTQYPDVNHAKVKLQAKEVGVYEAVKDDS 217
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDHC_BOVIN (Malate dehydrogenase, cytoplasmic OS=Bos taurus GN=MDH1 PE=2 SV=3) HSP 1 Score: 117.472 bits (293), Expect = 5.372e-37 Identity = 59/110 (53.64%), Postives = 77/110 (70.00%), Query Frame = 2 Query: 266 LNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDG-SYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKDLTY 592 L GEFITTVQQRGAA+IKARK CDH+RD GTPEG +VSMG SDG SY +P +YSFP T ++ W +V+GL I++ ++K+DLTA+EL+EEK+ + Sbjct: 219 LKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNSYGIPDDLLYSFPVTIKDKTWKVVEGLPINDFSREKMDLTAKELAEEKETAF 328 HSP 2 Score: 58.9214 bits (141), Expect = 5.372e-37 Identity = 28/45 (62.22%), Postives = 31/45 (68.89%), Query Frame = 1 Query: 127 VPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDA 261 V DVKNVIIWGNHSS+ YPDVNHA V E V E +KDD+ Sbjct: 173 VTSDDVKNVIIWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDS 217
BLAST of EY684555 vs. ExPASy Swiss-Prot
Match: MDHC_HUMAN (Malate dehydrogenase, cytoplasmic OS=Homo sapiens GN=MDH1 PE=1 SV=4) HSP 1 Score: 116.316 bits (290), Expect = 5.372e-37 Identity = 59/110 (53.64%), Postives = 75/110 (68.18%), Query Frame = 2 Query: 266 LNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGEYSDG-SYNVPPGHIYSFPKTCRNGEWTIVQGLSIDES*QKKLDLTAEELSEEKDLTY 592 L GEF+TTVQQRGAA+IKARK CDH+RD GTPEG +VSMG SDG SY VP +YSFP +N W V+GL I++ ++K+DLTA+EL+EEK+ + Sbjct: 219 LKGEFVTTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTWKFVEGLPINDFSREKMDLTAKELTEEKESAF 328 HSP 2 Score: 60.077 bits (144), Expect = 5.372e-37 Identity = 28/45 (62.22%), Postives = 32/45 (71.11%), Query Frame = 1 Query: 127 VPVSDVKNVIIWGNHSSSHYPDVNHATVNTAAGEKPVRELVKDDA 261 V +DVKNVIIWGNHSS+ YPDVNHA V E V E +KDD+ Sbjct: 173 VTANDVKNVIIWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDS 217 The following BLAST results are available for this feature:
BLAST of EY684555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684555 ID=EY684555; Name=EY684555; organism=Citrus sinensis; type=EST; length=995bpback to top |