EY710095

Overview
NameEY710095
Unique NameEY710095
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1054
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710095 vs. ExPASy Swiss-Prot
Match: GME1_ORYSJ (GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. japonica GN=GME-1 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.160e-36
Identity = 51/95 (53.68%), Postives = 63/95 (66.32%), Query Frame = 3
Query:  195 IASDWNNNDHMTEDVFCHEFHLVDLRVMDNCLTVTSGVDHEFNLAADKGWYGLYSVQPLCPRVEQYHDQL--QHALRLSNISGSKKCFSYASYCL 473
            IASDW  N+HMTED+FCHEFHLVDLRVMDNCL VT+GVDH FNLAAD G  G          V  Y++ +   + L  + I+G K+ F  +S C+
Sbjct:   57 IASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTNGVDHVFNLAADMGGMGFIQSN---HSVIMYNNTMISFNMLEAARINGVKRFFYASSACI 148          

HSP 2 Score: 76.6406 bits (187), Expect = 1.160e-36
Identity = 35/46 (76.09%), Postives = 38/46 (82.61%), Query Frame = 2
Query:   56 YGAYTYHHLDREPYWPS*NLRISVTGAGGFIASHIARRLKSECHYM 193
            YG YTY  L+RE YWPS  LRIS+TGAGGFI SHIARRLKSE HY+
Sbjct:   11 YGEYTYAELEREQYWPSEKLRISITGAGGFIGSHIARRLKSEGHYI 56          
BLAST of EY710095 vs. ExPASy Swiss-Prot
Match: GME_ARATH (GDP-mannose 3,5-epimerase OS=Arabidopsis thaliana GN=At5g28840 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.564e-36
Identity = 48/95 (50.53%), Postives = 61/95 (64.21%), Query Frame = 3
Query:  195 IASDWNNNDHMTEDVFCHEFHLVDLRVMDNCLTVTSGVDHEFNLAADKGWYGLYSVQPLCPRVEQYHDQL--QHALRLSNISGSKKCFSYASYCL 473
            IASDW  N+HMTED+FC EFHLVDLRVM+NCL VT GVDH FNLAAD G  G          V  Y++ +   + +  + I+G K+ F  +S C+
Sbjct:   55 IASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSN---HSVIMYNNTMISFNMIEAARINGIKRFFYASSACI 146          

HSP 2 Score: 81.6481 bits (200), Expect = 2.564e-36
Identity = 39/52 (75.00%), Postives = 44/52 (84.62%), Query Frame = 2
Query:   41 STEGT-YGAYTYHHLDREPYWPS*NLRISVTGAGGFIASHIARRLKSECHYM 193
            +T GT YGAYTY  L+RE YWPS NL+IS+TGAGGFIASHIARRLK E HY+
Sbjct:    3 TTNGTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHYV 54          
BLAST of EY710095 vs. ExPASy Swiss-Prot
Match: GME1_ORYSI (GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. indica GN=OsI_032456 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.667e-36
Identity = 50/95 (52.63%), Postives = 62/95 (65.26%), Query Frame = 3
Query:  195 IASDWNNNDHMTEDVFCHEFHLVDLRVMDNCLTVTSGVDHEFNLAADKGWYGLYSVQPLCPRVEQYHDQL--QHALRLSNISGSKKCFSYASYCL 473
            IASDW  N+HMTED+FCHEFHLVDLRVMDNCL VT+ VDH FNLAAD G  G          V  Y++ +   + L  + I+G K+ F  +S C+
Sbjct:   57 IASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTNSVDHVFNLAADMGGMGFIQSN---HSVIMYNNTMISFNMLEAARINGVKRFFYASSACI 148          

HSP 2 Score: 76.6406 bits (187), Expect = 5.667e-36
Identity = 35/46 (76.09%), Postives = 38/46 (82.61%), Query Frame = 2
Query:   56 YGAYTYHHLDREPYWPS*NLRISVTGAGGFIASHIARRLKSECHYM 193
            YG YTY  L+RE YWPS  LRIS+TGAGGFI SHIARRLKSE HY+
Sbjct:   11 YGEYTYAELEREQYWPSEKLRISITGAGGFIGSHIARRLKSEGHYI 56          
BLAST of EY710095 vs. ExPASy Swiss-Prot
Match: GME2_ORYSJ (GDP-mannose 3,5-epimerase 2 OS=Oryza sativa subsp. japonica GN=GME-2 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 1.632e-35
Identity = 51/95 (53.68%), Postives = 63/95 (66.32%), Query Frame = 3
Query:  195 IASDWNNNDHMTEDVFCHEFHLVDLRVMDNCLTVTSGVDHEFNLAADKGWYGLYSVQPLCPRVEQYHDQL--QHALRLSNISGSKKCFSYASYCL 473
            IASDW  N+HMTED+FCHEFHLVDLRVMDNCL VT+GVDH FNLAAD G  G          V  Y++ +   + L  + I+G K+ F  +S C+
Sbjct:   50 IASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTTGVDHVFNLAADMGGMGFIQSN---HSVIMYNNTMISFNMLEAARINGVKRFFYASSACI 141          

HSP 2 Score: 72.7886 bits (177), Expect = 1.632e-35
Identity = 33/43 (76.74%), Postives = 37/43 (86.05%), Query Frame = 2
Query:   65 YTYHHLDREPYWPS*NLRISVTGAGGFIASHIARRLKSECHYM 193
            YTY  L++EPYWP   LRIS+TGAGGFIASHIARRLKSE HY+
Sbjct:    7 YTYVELEKEPYWPFEKLRISITGAGGFIASHIARRLKSEGHYI 49          
The following BLAST results are available for this feature:
BLAST of EY710095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
GME1_ORYSJ1.160e-3653.68GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp.... [more]
GME_ARATH2.564e-3650.53GDP-mannose 3,5-epimerase OS=Arabidopsis thaliana ... [more]
GME1_ORYSI5.667e-3652.63GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp.... [more]
GME2_ORYSJ1.632e-3553.68GDP-mannose 3,5-epimerase 2 OS=Oryza sativa subsp.... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-111-H03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710095 ID=EY710095; Name=EY710095; organism=Citrus sinensis; type=EST; length=1054bp
CCCGCGTCCGCTCAAGTCTCCGTGTTTTTCACACTGTTGAAGTACTGAAG
GAACCTATGGTGCATACACCTATCATCATCTTGATAGGGAACCTTACTGG
CCTTCCTAAAACCTCCGAATTTCTGTCACTGGAGCAGGAGGTTTTATTGC
CTCCCACATTGCTCGGCGTCTGAAGAGTGAATGCCATTACATGTATTGCT
TCTGACTGGAATAACAATGATCACATGACTGAGGATGTGTTCTGTCATGA
ATTCCACCTTGTTGACCTTAGAGTCATGGACAATTGCTTGACAGTTACTA
GCGGGGTTGACCATGAGTTTAACCTTGCTGCTGATAAGGGTTGGTATGGG
CTTTATTCAGTCCAACCACTCTGTCCTCGTGTAGAACAATACCATGATCA
GCTTCAACATGCCTTGAGGCTTTCTAACATCAGTGGAAGTAAAAAATGTT
TTTCTTATGCCTCATATTGCCTTGCATCTAATCCCTAAATTCACCCAGCT
GGAGACTAACCTTAAGCTTGAAAGGAATCGGAAGCCCTGTCCCCCTGAAC
CCCTAAAGAATACCTTTAATGGGTTTGGGAGAAAACTTTGGCAATTGTAA
GGATTGTGGGTACTCCACTTCACGGAAAGAATTTTGTTTTTTGGAGTGGT
CCGGGTGGGAAGAATCTCCCCCAAAAAATTTTTGGGGGCCCTATTTGGAA
ACACTGTCAAAAGGGTGGAAAGGGGAAAAAAACCCCCCCTAAGAAATCTT
TTTTTGACCAAAGAAGGGTTCTTTTCCCTTTAAAGCGGGACAAACGTATT
TGAAAATTGGGGGGGAAGTAGAAGATCTTCCCAAACCCCCATACTCTTTT
TCCCCCCTTTCATTTTGTCTTGAAAAATTTTTGTGTGGAAACGGATGTGA
CCCAAAAAAAAATTTAAAAAAAAAACAGCCAGAGAACATTTTCCACCTAT
ATGATCATCATTTAACAACAAATAATCGTGGTGTATAACTGATGAATGAA
AATAAAGAGACTATTTCTTACACATCAATATGTTGAAAAACAGAAAAATA
AAAG
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