EY710089

Overview
NameEY710089
Unique NameEY710089
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length441
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY710089 vs. ExPASy Swiss-Prot
Match: AOC4_ARATH (Allene oxide cyclase 4, chloroplastic OS=Arabidopsis thaliana GN=AOC4 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 7.121e-18
Identity = 46/77 (59.74%), Postives = 53/77 (68.83%), Query Frame = 3 
Query:    3 YLAVTGGSGIFEGVYGQVKLHQIVFPYKLFYTFYLKGI-ADLPQELLVKPVEPSPTVXXXXXXXXXXXXXXISNFTN 230
            +LA+TGGSG+FEG YGQVKL Q+V+P KLFYTFYLKG+ ADLP EL  K VEPS  V              I+NFTN
Sbjct:  178 FLAITGGSGVFEGAYGQVKLRQLVYPTKLFYTFYLKGVAADLPVELTGKHVEPSKEVKPAAEAQATQPGATIANFTN 254
[Close]
BLAST of EY710089 vs. ExPASy Swiss-Prot
Match: AOC1_ARATH (Allene oxide cyclase 1, chloroplastic OS=Arabidopsis thaliana GN=AOC1 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 9.301e-18
Identity = 45/77 (58.44%), Postives = 53/77 (68.83%), Query Frame = 3 
Query:    3 YLAVTGGSGIFEGVYGQVKLHQIVFPYKLFYTFYLKGIA-DLPQELLVKPVEPSPTVXXXXXXXXXXXXXXISNFTN 230
            +LA+TGG+GIFEG YGQVKL Q+V+P KLFYTFYLKG+A DLP EL+  PV PS  V              +SNFTN
Sbjct:  178 FLAITGGAGIFEGAYGQVKLQQLVYPTKLFYTFYLKGLANDLPLELIGTPVPPSKDVEPAPEAKALKPSGVVSNFTN 254
[Close]
BLAST of EY710089 vs. ExPASy Swiss-Prot
Match: AOC3_ARATH (Allene oxide cyclase 3, chloroplastic OS=Arabidopsis thaliana GN=AOC3 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.616e-17
Identity = 47/77 (61.04%), Postives = 51/77 (66.23%), Query Frame = 3 
Query:    3 YLAVTGGSGIFEGVYGQVKLHQIVFPYKLFYTFYLKGIA-DLPQELLVKPVEPSPTVXXXXXXXXXXXXXXISNFTN 230
            +LAVTGGSGIFEG YGQVKL Q+V+P KLFYTFYLKG+A DLP EL    V PS  V              ISNFTN
Sbjct:  182 FLAVTGGSGIFEGAYGQVKLRQLVYPTKLFYTFYLKGLANDLPLELTGTAVTPSKDVKPAPEAKAMEPSGVISNFTN 258
[Close]
BLAST of EY710089 vs. ExPASy Swiss-Prot
Match: AOC2_ARATH (Allene oxide cyclase 2, chloroplastic OS=Arabidopsis thaliana GN=AOC2 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.616e-17
Identity = 44/77 (57.14%), Postives = 52/77 (67.53%), Query Frame = 3 
Query:    3 YLAVTGGSGIFEGVYGQVKLHQIVFPYKLFYTFYLKGIA-DLPQELLVKPVEPSPTVXXXXXXXXXXXXXXISNFTN 230
            +LA+TGG+GIFEG YGQVKL Q+V+P KLFYTFYLKG+A DLP EL   PV PS  +              ISN+TN
Sbjct:  177 FLAITGGAGIFEGAYGQVKLQQLVYPTKLFYTFYLKGLANDLPLELTGTPVPPSKDIEPAPEAKALEPSGVISNYTN 253
The following BLAST results are available for this feature:
BLAST of EY710089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
AOC4_ARATH7.121e-1859.74Allene oxide cyclase 4, chloroplastic OS=Arabidops... [more]
AOC1_ARATH9.301e-1858.44Allene oxide cyclase 1, chloroplastic OS=Arabidops... [more]
AOC3_ARATH4.616e-1761.04Allene oxide cyclase 3, chloroplastic OS=Arabidops... [more]
AOC2_ARATH4.616e-1757.14Allene oxide cyclase 2, chloroplastic OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-111-G07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710089 ID=EY710089; Name=EY710089; organism=Citrus sinensis; type=EST; length=441bp
CGTACTTGGCCGTCACCGGTGGCTCCGGGATCTTTGAGGGCGTGTACGGA
CAAGTCAAGTTGCATCAAATTGTTTTCCCTTACAAGTTGTTTTACACTTT
TTACTTGAAGGGTATTGCTGACTTGCCGCAAGAGCTTCTGGTGAAACCCG
TGGAGCCGTCGCCGACCGTCGAGGCTGCTCCGGCTGCCAAGGCCACCGAG
CCTCACGCCGCCATCAGTAACTTTACCAATTAATTAACTGATCCATGATG
CGGCAGCCATTTCTTTTTCATTTTAGTTTGATCAAGTAATCGGTGTGTGT
TCCCTCGGTGGCCGTGTTAATTAATTACTCTTTTTTTTAATTAATATAAA
ATAAAAATAAATAAAAATAAAAATCATTGCACTTGGAGTGCGTTTTGGTA
TNANAGAGAGAAAAGAAAAAATAAAAGCAAGAAAAAAAGGG
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