EY710088

Overview
NameEY710088
Unique NameEY710088
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710088 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.774e-47
Identity = 87/99 (87.88%), Postives = 94/99 (94.95%), Query Frame = 1
Query:   61 KRNGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGRQFRY 357
            KR+GGIRFTINGHSYFNLVL+TNVGGAGDVH+VS+KGSRT+WQ MSRNWGQNWQSNSYLNGQSLSFVVTTS+  SVVS+NVAPP WSFGQTYTG QFRY
Sbjct:  157 KRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSMKGSRTKWQLMSRNWGQNWQSNSYLNGQSLSFVVTTSDRRSVVSFNVAPPTWSFGQTYTGGQFRY 255          
BLAST of EY710088 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 9.236e-43
Identity = 78/97 (80.41%), Postives = 89/97 (91.75%), Query Frame = 1
Query:   64 RNGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGRQFR 354
            R GGIRFTINGHSYFNLVL+TNVGGAGDVH+V++KGSRTRWQ MSRNWGQNWQSN+ LNGQ+LSF VT S+G +VVS N+AP +WSFGQT+TGRQFR
Sbjct:  157 RRGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRWQQMSRNWGQNWQSNNLLNGQALSFKVTASDGRTVVSNNIAPASWSFGQTFTGRQFR 253          
BLAST of EY710088 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.584e-42
Identity = 78/98 (79.59%), Postives = 87/98 (88.78%), Query Frame = 1
Query:   61 KRNGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGRQFR 354
            +R GGIRFTINGHSYFNLVLITNVGGAGDVH+ +IKGSRT WQ MSRNWGQNWQSNSYLNGQ+LSF VTTS+G +VVS+N AP  WS+GQT+ G QFR
Sbjct:  152 RRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTVWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGWSYGQTFAGGQFR 249          
BLAST of EY710088 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.068e-41
Identity = 78/97 (80.41%), Postives = 84/97 (86.60%), Query Frame = 1
Query:   64 RNGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGRQFR 354
            R GGIRFTINGHSYFNLVLITNVGGAGDVH+  +KGSRT WQ MSRNWGQNWQSNSYLNGQSLSF VTTS+G ++VS NVA   WSFGQT+TG Q R
Sbjct:  154 RRGGIRFTINGHSYFNLVLITNVGGAGDVHSAMVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGQTIVSNNVANAGWSFGQTFTGAQLR 250          
BLAST of EY710088 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.285e-40
Identity = 76/98 (77.55%), Postives = 86/98 (87.76%), Query Frame = 1
Query:   61 KRNGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGRQFR 354
            +R GGIRFTINGHSYFNLVLITNV GAGDV +VSIKG+ TRWQ MSRNWGQNWQSN+ L+GQ+LSF VTTS+G +V+S N  P NWSFGQTYTG+QFR
Sbjct:  155 RRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNWGQNWQSNAKLDGQALSFKVTTSDGRTVISNNATPRNWSFGQTYTGKQFR 252          
BLAST of EY710088 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.630e-39
Identity = 77/97 (79.38%), Postives = 86/97 (88.66%), Query Frame = 1
Query:   64 RNGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTR-WQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGRQF 351
            + GGIRFTINGHSYFNLVLI+NVGGAGDVHAVSIKGS+T+ WQ MSRNWGQNWQSNSY+N QSLSF VTTS+G ++VS +VAP NW FGQTY G QF
Sbjct:  157 KKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQAMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNWQFGQTYQGGQF 253          
BLAST of EY710088 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.075e-38
Identity = 71/96 (73.96%), Postives = 82/96 (85.42%), Query Frame = 1
Query:   64 RNGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGRQF 351
            + GG+RFT+NGHSYFNLVL+TNV GAGDV +VSIKGSRT WQPMSRNWGQNWQSN++L+GQSLSF VT S+G +V S NVA P W FGQT+ G QF
Sbjct:  151 KKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTFEGGQF 246          
BLAST of EY710088 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.075e-38
Identity = 71/96 (73.96%), Postives = 82/96 (85.42%), Query Frame = 1
Query:   64 RNGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGRQF 351
            + GG+RFT+NGHSYFNLVL+TNV GAGDV +VSIKGSRT WQPMSRNWGQNWQSN++L+GQSLSF VT S+G +V S NVA P W FGQT+ G QF
Sbjct:  151 KKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTFEGGQF 246          
BLAST of EY710088 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.168e-37
Identity = 71/100 (71.00%), Postives = 85/100 (85.00%), Query Frame = 1
Query:   61 KRNGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIK---GSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGRQF 351
            +R GG+RFTINGHSYFNLVL++NVGGAGDVHAV++K   G + RWQ M+RNWGQNWQS + L+GQ+LSF VTT +  SVVSYNVAP  W+FGQT+TGRQF
Sbjct:  164 RRKGGMRFTINGHSYFNLVLVSNVGGAGDVHAVAVKAGGGRKARWQAMARNWGQNWQSGALLDGQALSFTVTTGDRRSVVSYNVAPAGWAFGQTFTGRQF 263          
BLAST of EY710088 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 4.440e-37
Identity = 71/96 (73.96%), Postives = 78/96 (81.25%), Query Frame = 1
Query:   64 RNGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTGRQF 351
            + GGIRFTINGHSYFNLVL+TNV G GDV +VSIKGS T WQPMSRNWGQNWQSNSYL+GQSLSF V  S+G +V S NV P  W FGQT+ G QF
Sbjct:  156 KKGGIRFTINGHSYFNLVLVTNVAGPGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSYLDGQSLSFQVAVSDGRTVTSNNVVPAGWQFGQTFEGGQF 251          
The following BLAST results are available for this feature:
BLAST of EY710088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
EXPA5_ARATH2.774e-4787.88Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 ... [more]
EXP15_ARATH9.236e-4380.41Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=... [more]
EXP10_ARATH4.584e-4279.59Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=... [more]
EXPA1_ARATH5.068e-4180.41Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 ... [more]
EXP14_ARATH3.285e-4077.55Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=... [more]
EXPA8_ARATH1.630e-3979.38Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 ... [more]
EXPA4_ORYSJ3.075e-3873.96Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA4_ORYSI3.075e-3873.96Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4... [more]
EXP21_ORYSJ1.168e-3771.00Expansin-A21 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA2_ORYSJ4.440e-3773.96Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXP... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-111-G06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710088 ID=EY710088; Name=EY710088; organism=Citrus sinensis; type=EST; length=742bp
TTTTATCAATTTACGGGACTGCGGTACGGTCGGGATTCCCGGGTCGACCC
CGCGTCCGGCAAGAGAAATGGGGGCATAAGGTTCACAATCAATGGCCATT
CTTACTTCAATTTAGTTCTAATAACAAACGTGGGAGGAGCTGGTGACGTG
CATGCTGTATCCATCAAAGGTTCAAGGACTAGATGGCAACCGATGTCGAG
AAACTGGGGCCAAAACTGGCAAAGCAACTCGTATCTTAATGGACAAAGCC
TCTCTTTTGTTGTGACCACAAGTAATGGCCACAGTGTTGTTTCTTACAAT
GTTGCCCCTCCTAATTGGTCATTTGGGCAGACTTATACCGGCAGACAATT
TCGATATTAGGCTTAATTTAAGTTAAAATCAAGCAACCCTTTAAGTATTT
TTAATTAGCTCTAGCGATATGGGTACGTACAAAATTATTTCTGAATTGGC
CCTTGTGTGCTTCAGTACCATTTATGAGAGTGTTTGCATGCAGTTTTTTC
ATGCTTTTGACTTGAGTGGCTGCTGCTGGGAGATAAAAGAGAAGTGATAG
AAATTCTGCTTAAAAGCAGGTTCCAATACATAAAATGTATTTGAGAAGTG
CTATAGTAAAAAGCATTTTGTTATTTGCCTTAATTGTTTTTGTAAGGTAA
ATTAATGAAATTTATATATATAATATATTAATTAAAACCTGTTATAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAGGCCGGCCGCCCCAAAAG
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