EY710080

Overview
NameEY710080
Unique NameEY710080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1042
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710080 vs. ExPASy Swiss-Prot
Match: AROA_ARATH (3-phosphoshikimate 1-carboxyvinyltransferase, chloroplastic OS=Arabidopsis thaliana GN=At2g45300 PE=2 SV=3)

HSP 1 Score: 270.781 bits (691), Expect = 4.539e-78
Identity = 131/161 (81.37%), Postives = 141/161 (87.58%), Query Frame = 1
Query:   46 IIDKLISVPYVEMTLKLMERFGVFVEHGDSWDRFFIQGGQKYKSPGNAFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEVLEKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVFALFADGPTAIRDVASWRVKKT 528
            I+DKLISVPYVEMTLKLMERFGV VEH DSWDRFF++GGQKYKSPGNA+VEGDASSASYF             EGCGT+SLQGDVKFAEVLEKMG KV+WTENSVTVTGPPRD +G +HLRA+DVNMNKMPDVAMTLAV ALFADGPT IRDVASWRVK+T
Sbjct:  276 IVDKLISVPYVEMTLKLMERFGVSVEHSDSWDRFFVKGGQKYKSPGNAYVEGDASSASYFLAGAAITGETVTVEGCGTTSLQGDVKFAEVLEKMGCKVSWTENSVTVTGPPRDAFGMRHLRAIDVNMNKMPDVAMTLAVVALFADGPTTIRDVASWRVKET 436          

HSP 2 Score: 43.1282 bits (100), Expect = 4.539e-78
Identity = 23/43 (53.49%), Postives = 30/43 (69.77%), Query Frame = 3
Query:  522 KNWKGRFAICTELKKLGATVEKRTKTTVWITPPEKIKVAAMGT 650
            K  +   AICTEL+KLGATVE+ +   V ITPP+K+K A + T
Sbjct:  434 KETERMIAICTELRKLGATVEEGSDYCV-ITPPKKVKTAEIDT 475          
BLAST of EY710080 vs. ExPASy Swiss-Prot
Match: AROA_BRANA (3-phosphoshikimate 1-carboxyvinyltransferase, chloroplastic OS=Brassica napus PE=3 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 1.871e-76
Identity = 131/161 (81.37%), Postives = 139/161 (86.34%), Query Frame = 1
Query:   46 IIDKLISVPYVEMTLKLMERFGVFVEHGDSWDRFFIQGGQKYKSPGNAFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEVLEKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVFALFADGPTAIRDVASWRVKKT 528
            IIDKLISVPYVEMTLKLMERFGV  EH DSWDRFF++GGQKYKSPGNA+VEGDASSASYF             EGCGT+SLQGDVKFAEVLEKMG KV+WTENSVTVTGP RD +G +HLRAVDVNMNKMPDVAMTLAV ALFADGPT IRDVASWRVK+T
Sbjct:  272 IIDKLISVPYVEMTLKLMERFGVSAEHSDSWDRFFVKGGQKYKSPGNAYVEGDASSASYFLAGAAITGETVTVEGCGTTSLQGDVKFAEVLEKMGCKVSWTENSVTVTGPSRDAFGMRHLRAVDVNMNKMPDVAMTLAVVALFADGPTTIRDVASWRVKET 432          

HSP 2 Score: 41.5874 bits (96), Expect = 1.871e-76
Identity = 23/43 (53.49%), Postives = 29/43 (67.44%), Query Frame = 3
Query:  522 KNWKGRFAICTELKKLGATVEKRTKTTVWITPPEKIKVAAMGT 650
            K  +   AICTEL+KLGATVE+ +   V ITPP K+K A + T
Sbjct:  430 KETERMIAICTELRKLGATVEEGSDYCV-ITPPAKVKPAEIDT 471          
BLAST of EY710080 vs. ExPASy Swiss-Prot
Match: AROA_PETHY (3-phosphoshikimate 1-carboxyvinyltransferase, chloroplastic OS=Petunia hybrida PE=1 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 5.414e-76
Identity = 131/161 (81.37%), Postives = 139/161 (86.34%), Query Frame = 1
Query:   46 IIDKLISVPYVEMTLKLMERFGVFVEHGDSWDRFFIQGGQKYKSPGNAFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEVLEKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVFALFADGPTAIRDVASWRVKKT 528
            IIDKLISVPYVEMTLKLMERFG+ VEH  SWDRFF++GGQKYKSPG AFVEGDASSASYF             EGCGT+SLQGDVKFAEVLEKMGA+VTWTENSVTV GPPR   GRKHLRA+DVNMNKMPDVAMTLAV AL+ADGPTAIRDVASWRVK+T
Sbjct:  272 IIDKLISVPYVEMTLKLMERFGISVEHSSSWDRFFVRGGQKYKSPGKAFVEGDASSASYFLAGAAVTGGTITVEGCGTNSLQGDVKFAEVLEKMGAEVTWTENSVTVKGPPRSSSGRKHLRAIDVNMNKMPDVAMTLAVVALYADGPTAIRDVASWRVKET 432          

HSP 2 Score: 40.817 bits (94), Expect = 5.414e-76
Identity = 22/43 (51.16%), Postives = 28/43 (65.12%), Query Frame = 3
Query:  522 KNWKGRFAICTELKKLGATVEKRTKTTVWITPPEKIKVAAMGT 650
            K  +   AICTEL+KLGATVE+     + ITPPEK+ V  + T
Sbjct:  430 KETERMIAICTELRKLGATVEEGPDYCI-ITPPEKLNVTDIDT 471          
BLAST of EY710080 vs. ExPASy Swiss-Prot
Match: AROA_SOLLC (3-phosphoshikimate 1-carboxyvinyltransferase, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 4.533e-75
Identity = 131/161 (81.37%), Postives = 137/161 (85.09%), Query Frame = 1
Query:   46 IIDKLISVPYVEMTLKLMERFGVFVEHGDSWDRFFIQGGQKYKSPGNAFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEVLEKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVFALFADGPTAIRDVASWRVKKT 528
            IIDKLISVPYVEMTLKLMERFGVFVEH   WDRF ++GGQKYKSPG AFVEGDASSASYF             EGCGTSSLQGDVKFAEVLEKMGA+VTWTENSVTV GPPR+  G KHLRA+DVNMNKMPDVAMTLAV ALFADGPT IRDVASWRVK+T
Sbjct:  276 IIDKLISVPYVEMTLKLMERFGVFVEHSSGWDRFLVKGGQKYKSPGKAFVEGDASSASYFLAGAAVTGGTVTVEGCGTSSLQGDVKFAEVLEKMGAEVTWTENSVTVKGPPRNSSGMKHLRAIDVNMNKMPDVAMTLAVVALFADGPTTIRDVASWRVKET 436          

HSP 2 Score: 39.2762 bits (90), Expect = 4.533e-75
Identity = 21/43 (48.84%), Postives = 28/43 (65.12%), Query Frame = 3
Query:  522 KNWKGRFAICTELKKLGATVEKRTKTTVWITPPEKIKVAAMGT 650
            K  +   AICTEL+KLGATV + +   + ITPPEK+ V  + T
Sbjct:  434 KETERMIAICTELRKLGATVVEGSDYCI-ITPPEKLNVTEIDT 475          
BLAST of EY710080 vs. ExPASy Swiss-Prot
Match: AROA1_TOBAC (3-phosphoshikimate 1-carboxyvinyltransferase 1, chloroplastic OS=Nicotiana tabacum GN=EPSPS-1 PE=2 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 2.910e-74
Identity = 131/161 (81.37%), Postives = 138/161 (85.71%), Query Frame = 1
Query:   46 IIDKLISVPYVEMTLKLMERFGVFVEHGDSWDRFFIQGGQKYKSPGNAFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEVLEKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVFALFADGPTAIRDVASWRVKKT 528
            IIDKLISVPYVEMTLKLMERFGV VEH  SWD+F ++GGQKYKSPG A+VEGDASSASYF             EGCGTSSLQGDVKFAEVLEKMGA+VTWTENSVTV GPPR+  G KHLRAVDVNMNKMPDVAMTLAV ALFADGPTAIRDVASWRVK+T
Sbjct:  274 IIDKLISVPYVEMTLKLMERFGVSVEHTSSWDKFLVRGGQKYKSPGKAYVEGDASSASYFLAGAAVTGGTVTVEGCGTSSLQGDVKFAEVLEKMGAEVTWTENSVTVKGPPRNSSGMKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKET 434          

HSP 2 Score: 39.2762 bits (90), Expect = 2.910e-74
Identity = 21/43 (48.84%), Postives = 28/43 (65.12%), Query Frame = 3
Query:  522 KNWKGRFAICTELKKLGATVEKRTKTTVWITPPEKIKVAAMGT 650
            K  +   AICTEL+KLGATV + +   + ITPPEK+ V  + T
Sbjct:  432 KETERMIAICTELRKLGATVVEGSDYCI-ITPPEKLNVTEIDT 473          
BLAST of EY710080 vs. ExPASy Swiss-Prot
Match: AROA2_TOBAC (3-phosphoshikimate 1-carboxyvinyltransferase 2 (Fragment) OS=Nicotiana tabacum GN=EPSPS-2 PE=2 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 9.218e-73
Identity = 127/161 (78.88%), Postives = 136/161 (84.47%), Query Frame = 1
Query:   46 IIDKLISVPYVEMTLKLMERFGVFVEHGDSWDRFFIQGGQKYKSPGNAFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEVLEKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVFALFADGPTAIRDVASWRVKKT 528
            IIDKLISV YVEMTLKLMERFG+ VEH  SWDRF ++GGQKYKSPG A+VEGDASSASYF             EGCGTSSLQGDVKFAEVLE+MGA+VTWTENSVTV GPPR+    KHLRA+DVNMNKMPDVAMTLAV ALFADGPTAIRDVASWRVK+T
Sbjct:   94 IIDKLISVLYVEMTLKLMERFGISVEHSSSWDRFVVRGGQKYKSPGKAYVEGDASSASYFLAGAAVTGGTVTVEGCGTSSLQGDVKFAEVLEQMGAEVTWTENSVTVKGPPRNSSAMKHLRAIDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKET 254          

HSP 2 Score: 41.2022 bits (95), Expect = 9.218e-73
Identity = 22/43 (51.16%), Postives = 28/43 (65.12%), Query Frame = 3
Query:  522 KNWKGRFAICTELKKLGATVEKRTKTTVWITPPEKIKVAAMGT 650
            K  +   AICTEL+KLGATVE+     + ITPPEK+ V  + T
Sbjct:  252 KETERMIAICTELRKLGATVEEGPDYCI-ITPPEKLNVTEIDT 293          
BLAST of EY710080 vs. ExPASy Swiss-Prot
Match: AROA_RALEJ (3-phosphoshikimate 1-carboxyvinyltransferase OS=Ralstonia eutropha (strain JMP134) GN=aroA PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.896e-38
Identity = 80/163 (49.08%), Postives = 106/163 (65.03%), Query Frame = 1
Query:   46 IIDKLISVPYVEMTLKLMERFGVFVEHGDSWDRFFIQGGQKYKSPGNAFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEVLEKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVFALFADGPTAIRDVASWRVKKTGK 534
            ++ +LIS PY+E+TL L+ RFG+ VE    W+RF +  G  Y+SPG  +VEGDASSASYF             EG G SS+QGDV+FAE L +MGA V   +N + V G  RD  GR H   ++++ N +PD AMTLAV ALFA G T + ++ASWRVK+T +
Sbjct:  193 VVGELISKPYIEITLNLLARFGINVER-QGWERFIVPAGAVYRSPGEIYVEGDASSASYFLAAGAIGGGPVRVEGVGMSSIQGDVRFAEALNRMGANVMAGDNWIEVRGTERDD-GRLH--GIELDCNHIPDAAMTLAVAALFAGGTTTLTNIASWRVKETDR 351          

HSP 2 Score: 28.8758 bits (63), Expect = 1.896e-38
Identity = 17/35 (48.57%), Postives = 20/35 (57.14%), Query Frame = 3
Query:  543 AICTELKKLGATVE------KRTKTTVWITPPEKI 629
            A+ TEL+KLGATVE      K T    W TP + I
Sbjct:  354 AMATELRKLGATVEEGADYLKVTPPAQWQTPADGI 388          
BLAST of EY710080 vs. ExPASy Swiss-Prot
Match: AROA_SERP5 (3-phosphoshikimate 1-carboxyvinyltransferase OS=Serratia proteamaculans (strain 568) GN=aroA PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 2.470e-38
Identity = 77/160 (48.12%), Postives = 105/160 (65.62%), Query Frame = 1
Query:   55 KLISVPYVEMTLKLMERFGVFVEHGDSWDRFFIQGGQKYKSPGNAFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEVLEKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVFALFADGPTAIRDVASWRVKKTGK 534
            +L+S PY+++TL LM  FGV V H D++  F I G Q Y+SPG+  VEGDASSASYF              G G  S+QGD KFA+VLEKMGA++TW ++ +  +        R  LR +D++MN +PD AMT+A  ALFA+GPT IR++ +WRVK+T +
Sbjct:  195 ELVSKPYIDITLHLMRTFGVEVSH-DNYRVFHINGRQTYRSPGDYLVEGDASSASYFLAAAAIKGGTVRVTGIGKKSVQGDTKFADVLEKMGARITWGDDYIECS--------RGELRGIDMDMNHIPDAAMTIATAALFAEGPTTIRNIYNWRVKETDR 345          

HSP 2 Score: 31.187 bits (69), Expect = 2.470e-38
Identity = 15/36 (41.67%), Postives = 25/36 (69.44%), Query Frame = 3
Query:  543 AICTELKKLGATVEKRTKTTVWITPPEKIKVAAMGT 650
            A+ TEL+K+GA V++  +  + + PP K+K A +GT
Sbjct:  348 AMATELRKVGAEVDE-GEDYIHVVPPAKLKFADIGT 382          
BLAST of EY710080 vs. ExPASy Swiss-Prot
Match: AROA_RALEH (3-phosphoshikimate 1-carboxyvinyltransferase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=aroA PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 5.461e-38
Identity = 79/163 (48.47%), Postives = 107/163 (65.64%), Query Frame = 1
Query:   46 IIDKLISVPYVEMTLKLMERFGVFVEHGDSWDRFFIQGGQKYKSPGNAFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEVLEKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVFALFADGPTAIRDVASWRVKKTGK 534
            ++ +LIS PY+E+TL L+ RFG+ +E    W+RF +  G  Y+SPG  FVEGDASSASYF             EG G +S+QGDV+FAE L +MGA V   +N + V G  RD  GR H   ++++ N +PD AMTLAV ALFA+G T + ++ASWRVK+T +
Sbjct:  193 VVGELISKPYIEITLNLLARFGIEIER-QGWERFVLPAGAAYRSPGEIFVEGDASSASYFLAAGAIGGGPVRVEGVGMASIQGDVRFAEALNRMGANVMAGDNWIEVRGTERDD-GRLH--GIELDCNHIPDAAMTLAVAALFAEGTTTLTNIASWRVKETDR 351          

HSP 2 Score: 26.9498 bits (58), Expect = 5.461e-38
Identity = 15/35 (42.86%), Postives = 22/35 (62.86%), Query Frame = 3
Query:  543 AICTELKKLGATVEKRTKTTVWITPPEKIKVAAMG 647
            A+ TEL+KLGA VE+     + +TPP+  +  A G
Sbjct:  354 AMATELRKLGAVVEEGA-DYLRVTPPQPWQTPADG 387          
BLAST of EY710080 vs. ExPASy Swiss-Prot
Match: AROA_CUPTR (3-phosphoshikimate 1-carboxyvinyltransferase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=aroA PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 7.114e-38
Identity = 79/163 (48.47%), Postives = 107/163 (65.64%), Query Frame = 1
Query:   46 IIDKLISVPYVEMTLKLMERFGVFVEHGDSWDRFFIQGGQKYKSPGNAFVEGDASSASYFXXXXXXXXXXXXXEGCGTSSLQGDVKFAEVLEKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVFALFADGPTAIRDVASWRVKKTGK 534
            ++ +LIS PY+E+TL L+ RFG+ VE    W+RF +  G  Y+SPG  FVEGDASSASYF             EG G +S+QGDV+FA+ L +MGA V   +N + V G  RD  GR H   ++++ N +PD AMTLAV ALFA+G T + ++ASWRVK+T +
Sbjct:  193 VVGELISKPYIEITLNLLARFGIEVER-QGWERFILPAGTAYRSPGEIFVEGDASSASYFLAAGAIGGGPVRVEGVGMASIQGDVRFADALNRMGANVMAGDNWIEVRGTERDD-GRLH--GIELDCNHIPDAAMTLAVAALFAEGTTTLTNIASWRVKETDR 351          

HSP 2 Score: 26.9498 bits (58), Expect = 7.114e-38
Identity = 15/35 (42.86%), Postives = 22/35 (62.86%), Query Frame = 3
Query:  543 AICTELKKLGATVEKRTKTTVWITPPEKIKVAAMG 647
            A+ TEL+KLGA VE+     + +TPP+  +  A G
Sbjct:  354 AMATELRKLGAVVEEGA-DYLRVTPPQPWQTPADG 387          
The following BLAST results are available for this feature:
BLAST of EY710080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 220
Match NameE-valueIdentityDescription
AROA_ARATH4.539e-7881.373-phosphoshikimate 1-carboxyvinyltransferase, chlo... [more]
AROA_BRANA1.871e-7681.373-phosphoshikimate 1-carboxyvinyltransferase, chlo... [more]
AROA_PETHY5.414e-7681.373-phosphoshikimate 1-carboxyvinyltransferase, chlo... [more]
AROA_SOLLC4.533e-7581.373-phosphoshikimate 1-carboxyvinyltransferase, chlo... [more]
AROA1_TOBAC2.910e-7481.373-phosphoshikimate 1-carboxyvinyltransferase 1, ch... [more]
AROA2_TOBAC9.218e-7378.883-phosphoshikimate 1-carboxyvinyltransferase 2 (Fr... [more]
AROA_RALEJ1.896e-3849.083-phosphoshikimate 1-carboxyvinyltransferase OS=Ra... [more]
AROA_SERP52.470e-3848.133-phosphoshikimate 1-carboxyvinyltransferase OS=Se... [more]
AROA_RALEH5.461e-3848.473-phosphoshikimate 1-carboxyvinyltransferase OS=Ra... [more]
AROA_CUPTR7.114e-3848.473-phosphoshikimate 1-carboxyvinyltransferase OS=Cu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-111-F08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710080 ID=EY710080; Name=EY710080; organism=Citrus sinensis; type=EST; length=1042bp
GTACACGGTCCGGAAATTTCCGGGTCGACCCCGCGTCCGAATTGAATAAT
TGATAAACTGATTTCCGTTCCTTATGTTGAGATGACTCTGAAGTTGATGG
AGCGTTTTGGGGTCTTTGTAGAGCACGGTGATAGCTGGGATCGGTTCTTC
ATCCAGGGGGGTCAAAAGTACAAGTCTCCTGGAAATGCTTTTGTAGAAGG
TGATGCTTCAAGTGCTAGTTACTTTGTAGCTGGTGCTGCAGTAACTGGTG
GGACCGTTACAGTTGAAGGTTGTGGGACAAGTAGTTTACAGGGGGATGTG
AAATTTGCTGAGGTTCTTGAGAAAATGGGTGCCAAAGTTACCTGGACTGA
AAACAGTGTAACTGTCACCGGACCACCACGAGATCCTTATGGAAGGAAAC
ACTTGCGTGCTGTAGATGTCAACATGAACAAGATGCCAGATGTTGCCATG
ACTCTAGCTGTATTTGCACTATTTGCTGATGGTCCCACTGCCATTAGGGA
TGTGGCAAGTTGGAGAGTGAAAAAAACTGGAAAGGAAGATTTGCTATTTG
CACAGAACTCAAAAAGTTGGGAGCAACAGTTGAAAAAAGGACCAAAACTA
CTGTGTGGATCACCCCACCTGAAAAAATAAAAGTAGCAGCAATGGGCACT
TAATGAAGAACACCGGATTGCCCATGGGGATTCCTCCCTAACTGGCTTGG
TGCTGAAGTTTCCAGTCCCCCCTTTTAAAGGGATCCCTTTTGCCCCCCAG
GAAAAAATTTTTCCCCCCAAATTATTTTTTCAAATGTTGGTTCCAAAAGG
GTTAAAAAAAAAAGTTAAAAAAGCTTTCTTTCCCAATTTTTCTCATTGAA
AAAAAAAAAAACTTTTTCCACCCTCCCCTCTAACATACAAAAAAAAAAAA
ACAAAAAAAATCCCCCCAACTTGGAAAACTCTGGGGAATGGGGAGCGTTT
GGTATAAATTGGGCCCCATAAATAGATAATTAAGGTATGGTTGAGATAAT
TTGAGAGAGAATATGTAGTTTTATTTTTTTTTTGCCACGAAA
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