EY710079

Overview
NameEY710079
Unique NameEY710079
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length951
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710079 vs. ExPASy Swiss-Prot
Match: TRPE_ARATH (Anthranilate synthase component I-1, chloroplastic OS=Arabidopsis thaliana GN=ASA1 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 5.173e-50
Identity = 95/113 (84.07%), Postives = 106/113 (93.81%), Query Frame = 3
Query:   12 VSGAPKVKAMELIDELEVTRRGPYSGGFGGISFTGDMDIALALRTIVFPTATRYDTMYSYKDVDKRREWIAHLQAGAGIVADSDPNDEQKECENKAAGIARAIDLAESSFVDK 350
            VSGAPKVKAMELIDELE TRRGPYSGGFGG+SFTGDMDIAL+LRTIVFPTA +Y+TMYSYKD +KRREW+A+LQAGAG+VADSDP DE  EC+NKAAG+ARAIDLAES+FV K
Sbjct:  483 VSGAPKVKAMELIDELEPTRRGPYSGGFGGVSFTGDMDIALSLRTIVFPTACQYNTMYSYKDANKRREWVAYLQAGAGVVADSDPQDEHCECQNKAAGLARAIDLAESAFVKK 595          
BLAST of EY710079 vs. ExPASy Swiss-Prot
Match: TRPX_ARATH (Anthranilate synthase component I-2, chloroplastic OS=Arabidopsis thaliana GN=ASA2 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 1.152e-49
Identity = 95/112 (84.82%), Postives = 105/112 (93.75%), Query Frame = 3
Query:   12 VSGAPKVKAMELIDELEVTRRGPYSGGFGGISFTGDMDIALALRTIVFPTATRYDTMYSYKDVDKRREWIAHLQAGAGIVADSDPNDEQKECENKAAGIARAIDLAESSFVD 347
            VSGAPKVKAMELIDELEVTRRGPYSGGFGGISF GDMDIALALRT+VFPT TRYDT+YSYK   +RREWIAH+QAGAGIVADS+P+DE +ECENKAA +ARAIDLAESSF++
Sbjct:  496 VSGAPKVKAMELIDELEVTRRGPYSGGFGGISFNGDMDIALALRTMVFPTNTRYDTLYSYKHPQRRREWIAHIQAGAGIVADSNPDDEHRECENKAAALARAIDLAESSFLE 607          
BLAST of EY710079 vs. ExPASy Swiss-Prot
Match: TRPE_THET8 (Anthranilate synthase component 1 OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=trpE PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.243e-19
Identity = 52/108 (48.15%), Postives = 70/108 (64.81%), Query Frame = 3
Query:   12 VSGAPKVKAMELIDELEVTRRGPYSGGFGGISFTGDMDIALALRTIVFPTATRYDTMYSYKDVDKRREWIAHLQAGAGIVADSDPNDEQKECENKAAGIARAIDLAES 335
            VSGAPK++AME+I+ELE  RRGPY G FG +++ G MD+AL LRT V                   + W+ H+QAGAGIVADS P  E +EC NKA  + +A+++AE+
Sbjct:  371 VSGAPKIRAMEIIEELEPHRRGPYGGSFGYLAYDGAMDMALTLRTFVV-----------------AKGWM-HVQAGAGIVADSVPEREYEECWNKARALLKAVEMAEA 460          
BLAST of EY710079 vs. ExPASy Swiss-Prot
Match: TRPE_CLOTM (Anthranilate synthase component 1 OS=Clostridium thermocellum GN=trpE PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.819e-18
Identity = 48/106 (45.28%), Postives = 66/106 (62.26%), Query Frame = 3
Query:   12 VSGAPKVKAMELIDELEVTRRGPYSGGFGGISFTGDMDIALALRTIVFPTATRYDTMYSYKDVDKRREWIAHLQAGAGIVADSDPNDEQKECENKAAGIARAIDLA 329
            +SGAPKV+AME+IDELE  +RGPY G  G +SF G++D  + +RTI+                   ++  A++QAGAGIVADS P  E +EC NKA  + +AI+ A
Sbjct:  403 LSGAPKVRAMEIIDELETVKRGPYGGAIGYLSFNGNLDSCITIRTIIL------------------KDGKAYVQAGAGIVADSVPEREYEECYNKAMALLKAIEEA 490          
BLAST of EY710079 vs. ExPASy Swiss-Prot
Match: TRPE_AQUAE (Anthranilate synthase component 1 OS=Aquifex aeolicus GN=trpE PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.819e-18
Identity = 54/109 (49.54%), Postives = 70/109 (64.22%), Query Frame = 3
Query:   12 VSGAPKVKAMELIDELEVTRRGPYSGGFGGISFTGDMDIALALRTIVFPTATRYDTMYSYKDVDKRREWIAHLQAGAGIVADSDPNDEQKECENKAAGIARAIDLAESS 338
            VSGAPKV+AM++I+ELE  RRG Y+G  G ISF G+MD+A+A+RT V            Y+D D        +QAGAGIVADS P  E +E  NKA  + +AI++AE S
Sbjct:  401 VSGAPKVRAMQIIEELENERRGIYAGSVGYISFQGNMDMAIAIRTAV------------YRDRD------IFVQAGAGIVADSVPEKEWEETVNKAKALMKAIEIAEES 491          
BLAST of EY710079 vs. ExPASy Swiss-Prot
Match: TRPE_SYNY3 (Probable anthranilate synthase component 1 OS=Synechocystis sp. (strain PCC 6803) GN=trpE PE=3 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 1.089e-15
Identity = 49/103 (47.57%), Postives = 63/103 (61.17%), Query Frame = 3
Query:   12 VSGAPKVKAMELIDELEVTRRGPYSGGFGGISFTGDMDIALALRTIVFPTATRYDTMYSYKDVDKRREWIAHLQAGAGIVADSDPNDEQKECENKAAGIARAI 320
            VSGAPK++AME+I+ELE  RRGPYSG +G   F G ++ A+A+RT+V         +    D   R      +Q GAGIVADSDP  E +E  NKA G+  AI
Sbjct:  415 VSGAPKIRAMEIINELEPERRGPYSGVYGYYDFEGQLNTAIAIRTMV---------VQEQPDGAHR----VSVQTGAGIVADSDPQKEYEETLNKARGLLEAI 504          
BLAST of EY710079 vs. ExPASy Swiss-Prot
Match: TRPE_NEIMA (Anthranilate synthase component 1 OS=Neisseria meningitidis serogroup A GN=trpE PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.089e-15
Identity = 45/107 (42.06%), Postives = 63/107 (58.88%), Query Frame = 3
Query:   12 VSGAPKVKAMELIDELEVTRRGPYSGGFGGISFTGDMDIALALRTIVFPTATRYDTMYSYKDVDKRREWIAHLQAGAGIVADSDPNDEQKECENKAAGIARAIDLAE 332
            +SGAPKV+AME+I+E+E ++RG Y G  G   F  DMD+A+A+RT V    T Y                  +Q+GAG+VADSDP  E +E +NKA  + RA  + +
Sbjct:  398 LSGAPKVRAMEIIEEVEPSKRGIYGGAVGVWGFNNDMDLAIAIRTAVVKNNTLY------------------VQSGAGVVADSDPASEWQETQNKARAVIRAAQMVQ 486          
BLAST of EY710079 vs. ExPASy Swiss-Prot
Match: TRPE_NEIGO (Anthranilate synthase component 1 OS=Neisseria gonorrhoeae GN=trpE PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.089e-15
Identity = 44/107 (41.12%), Postives = 62/107 (57.94%), Query Frame = 3
Query:   12 VSGAPKVKAMELIDELEVTRRGPYSGGFGGISFTGDMDIALALRTIVFPTATRYDTMYSYKDVDKRREWIAHLQAGAGIVADSDPNDEQKECENKAAGIARAIDLAE 332
            +SGAPKV+AME+I+E+E  +RG Y G  G   F  DMD+A+A+RT V    T +                  +Q+GAG+VADSDP  E +E +NKA  + RA  + +
Sbjct:  398 LSGAPKVRAMEIIEEIEPEKRGIYGGAVGVWGFNNDMDLAIAIRTAVIKNNTLF------------------IQSGAGVVADSDPTSEWQETQNKARAVVRAAQMVQ 486          
BLAST of EY710079 vs. ExPASy Swiss-Prot
Match: TRPE_NEIG1 (Anthranilate synthase component 1 OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=trpE PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.089e-15
Identity = 44/107 (41.12%), Postives = 62/107 (57.94%), Query Frame = 3
Query:   12 VSGAPKVKAMELIDELEVTRRGPYSGGFGGISFTGDMDIALALRTIVFPTATRYDTMYSYKDVDKRREWIAHLQAGAGIVADSDPNDEQKECENKAAGIARAIDLAE 332
            +SGAPKV+AME+I+E+E  +RG Y G  G   F  DMD+A+A+RT V    T +                  +Q+GAG+VADSDP  E +E +NKA  + RA  + +
Sbjct:  398 LSGAPKVRAMEIIEEIEPEKRGIYGGAVGVWGFNNDMDLAIAIRTAVIKNNTLF------------------IQSGAGVVADSDPTSEWQETQNKARAVVRAAQMVQ 486          
BLAST of EY710079 vs. ExPASy Swiss-Prot
Match: TRPE2_HALMA (Anthranilate synthase component 1 2 OS=Haloarcula marismortui GN=trpE2 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.857e-15
Identity = 49/112 (43.75%), Postives = 64/112 (57.14%), Query Frame = 3
Query:   12 VSGAPKVKAMELIDELEVTRRGPYSGGFGGISFTGDMDIALALRTIVFPTATRYDTMYSYKDVDKRREWIAHLQAGAGIVADSDPNDEQKECENKAAGIARAIDLAESSFVD 347
            +SGAPK++AME+IDELE + RGPY GG G   + GD D A+ +R+          T+    D D+       +QAGAGIVADSDP  E  E E K  G+  A++  E   VD
Sbjct:  426 LSGAPKIRAMEIIDELERSPRGPYGGGVGYFDWDGDTDFAIVIRSA---------TVEDEGDRDR-----ITVQAGAGIVADSDPESEYVETEQKMDGVLTALEEIEGEPVD 523          
The following BLAST results are available for this feature:
BLAST of EY710079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
TRPE_ARATH5.173e-5084.07Anthranilate synthase component I-1, chloroplastic... [more]
TRPX_ARATH1.152e-4984.82Anthranilate synthase component I-2, chloroplastic... [more]
TRPE_THET81.243e-1948.15Anthranilate synthase component 1 OS=Thermus therm... [more]
TRPE_CLOTM6.819e-1845.28Anthranilate synthase component 1 OS=Clostridium t... [more]
TRPE_AQUAE6.819e-1849.54Anthranilate synthase component 1 OS=Aquifex aeoli... [more]
TRPE_SYNY31.089e-1547.57Probable anthranilate synthase component 1 OS=Syne... [more]
TRPE_NEIMA1.089e-1542.06Anthranilate synthase component 1 OS=Neisseria men... [more]
TRPE_NEIGO1.089e-1541.12Anthranilate synthase component 1 OS=Neisseria gon... [more]
TRPE_NEIG11.089e-1541.12Anthranilate synthase component 1 OS=Neisseria gon... [more]
TRPE2_HALMA1.857e-1543.75Anthranilate synthase component 1 2 OS=Haloarcula ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-111-F06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710079 ID=EY710079; Name=EY710079; organism=Citrus sinensis; type=EST; length=951bp
CCACGCGTCCGGTTAGTGGAGCACCCAAGGTGAAAGCCATGGAGTTGATT
GATGAGCTGGAAGTCACCAGGCGCGGGCCTTATAGTGGTGGATTTGGAGG
CATTTCATTTACTGGTGACATGGACATTGCCCTTGCTCTCAGAACTATAG
TCTTCCCAACTGCTACACGCTATGACACTATGTATTCATACAAAGATGTG
GACAAGCGAAGGGAATGGATCGCTCATTTGCAAGCTGGGGCTGGAATTGT
GGCTGACAGTGACCCTAATGACGAACAGAAAGAGTGCGAGAACAAAGCTG
CTGGTATTGCGCGTGCCATTGATCTTGCAGAGTCCTCATTTGTTGATAAA
TGATCAAAGTTTACGCCTTATGGAGTCCCTTGATTTTTGCTGATATTGTC
TCTGATCATAAATCGCTGGCTTGAGGCATTTTTGCTTGTAGTTGGGTGCA
AAATTTTCTGCCAACGGTATGAGTTAGTAAAAACTAATGTCAAGCCTCAT
GTGAATGCTTGGGTGAGCAAATTGGAAGTTTGAAGAAATCAAAACGTTTT
TTTAAATATTTTAATTTTCTCTCTAAAAAAAAAAAAAAAGGCCGGCCGCT
CTAAAGAATCCAGCTTAACGTACCCCTGCCAGCAACGCAATAACTCCTTC
CTAAATGGCCACCAAAATCAAATTCAATGGGCCCGTCTTTTAAACAACGC
CAGGAACGGGGAAAACCCATTGGGTTTAACACAATTTTACCCCCTTGGGG
AAAACTCCCCCCTTTCCCCCAGCTGGGAGAAAAAAGCCAAAAAAAGCCCC
CCACCCTATTCCCCCTTTCCCAAAAATTTTGGCACCCCCCCAAATAGGGG
AAAAAGGGAAAAACCCCCCCCTGTAAAACGCAGCCATATTTAAACACACA
GGCGGGTGTGAGGGGGAGGTTTAACACACCAACAAATATGGAAAAACACA
A
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