EY710046
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY710046 vs. ExPASy Swiss-Prot
Match: FB304_ARATH (F-box protein At3g54460 OS=Arabidopsis thaliana GN=At3g54460 PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 9.765e-59 Identity = 99/130 (76.15%), Postives = 114/130 (87.69%), Query Frame = 3 Query: 15 DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRKLL 404 DKV+IFSQFLEHIHVIEQQLT AGIKF MYSPM S NK+K+L MF++DA C+ALLMDGS +LGLDLSFVT VFLMEPIWD+S+EEQVISRAHRMGA RPI VETL MRGT+EEQM+ FL+D ++ +LL Sbjct: 1194 DKVLIFSQFLEHIHVIEQQLTTAGIKFGKMYSPMQSYNKMKALAMFQNDADCMALLMDGSGALGLDLSFVTHVFLMEPIWDKSLEEQVISRAHRMGAKRPIFVETLTMRGTIEEQMMRFLEDAEKSDRLL 1323 HSP 2 Score: 45.0542 bits (105), Expect = 9.765e-59 Identity = 19/32 (59.38%), Postives = 26/32 (81.25%), Query Frame = 1 Query: 418 VKPEREGARSHRTLHDFAENNYLSHLSFVRTN 513 ++ ++E RS RTLHD E+NYLSHLSFVR++ Sbjct: 1328 IEAKQETTRSRRTLHDLVESNYLSHLSFVRSD 1359
BLAST of EY710046 vs. ExPASy Swiss-Prot
Match: YBMA_SCHPO (Uncharacterized ATP-dependent helicase C582.10c OS=Schizosaccharomyces pombe GN=SPBC582.10c PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.573e-14 Identity = 48/125 (38.40%), Postives = 72/125 (57.60%), Query Frame = 3 Query: 18 KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 389 K IIFSQF + +I+ L AGI F M++ + KSLD+ R D+ LL +LGL+L+ +RV L + W+ ++EEQ I R HR+G R + V L + T+EE+++E LQ+ R Sbjct: 672 KTIIFSQFTTFLDIIDLHLRKAGIGFVRYDGRMNNRAREKSLDLLRSDSGTQVLLCSLKCGALGLNLTCASRVILCDVWWNPAIEEQAIDRVHRIGQRRDVLVYKLVVENTIEEKIVE-LQNLKR 795
BLAST of EY710046 vs. ExPASy Swiss-Prot
Match: RAD5_SCHPO (DNA repair protein rad5 OS=Schizosaccharomyces pombe GN=rad8 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.573e-14 Identity = 43/120 (35.83%), Postives = 67/120 (55.83%), Query Frame = 3 Query: 12 PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 368 P+KV+IFSQF + +I L + +A M + +L+ FR+D L++ A +GL+L+ VF+M+P W S+E Q I R HR+G +P+ V +R TVEE+ML+ Sbjct: 981 PEKVVIFSQFTTFLDIIADVLESEKMGYARFDGTMSQQMRSTALETFRNDPDVNVLIISLKAGGVGLNLTCANHVFIMDPWWSWSVEAQAIDRIHRLGQEKPVFVTRYIVRDTVEERMLK 1100
BLAST of EY710046 vs. ExPASy Swiss-Prot
Match: YF2C_SCHPO (Uncharacterized ATP-dependent helicase C17A2.12 OS=Schizosaccharomyces pombe GN=SPAC17A2.12 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.316e-13 Identity = 40/133 (30.08%), Postives = 77/133 (57.89%), Query Frame = 3 Query: 15 DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRKLLKE 410 +K++++SQF +++ ++ L + I+ M ++ + KSL F +D L +L+ A S+GL+L+ V L EP ++ S+E+Q I R HR+G +P+ V + T+EE+++ + + R+L+KE Sbjct: 742 EKILVYSQFSQYLCLVSHMLKLENIRHVRYDGTMSANQRQKSLHSFNNDKDVLVMLVSLKAGSVGLNLTIANHVILQEPFYNPSIEDQAIDRVHRLGQQKPVTVYRFITKDTIEERIVSVQR---KKRQLVKE 871
BLAST of EY710046 vs. ExPASy Swiss-Prot
Match: RAD5_CRYNE (DNA repair protein RAD5 OS=Cryptococcus neoformans GN=RAD5 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.149e-12 Identity = 35/119 (29.41%), Postives = 70/119 (58.82%), Query Frame = 3 Query: 18 KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMF--RHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 368 K ++FSQF + +IE LT GI++ M + + +++ F + + + L+ + +GL+L+ VFLM+ W+ ++E+Q I R HR+G +P++V ++GTVE+++++ Sbjct: 1037 KALVFSQFTSFLDLIEATLTKQGIRWLRFDGTMSQAQRANTIEEFGRKTNEPLILLISLKAGGVGLNLTMANYVFLMDTWWNEAIEQQAIDRVHRLGQNKPVYVTRYIIKGTVEKRIMK 1155
BLAST of EY710046 vs. ExPASy Swiss-Prot
Match: YG42_SCHPO (Uncharacterized ATP-dependent helicase C23E6.02 OS=Schizosaccharomyces pombe GN=SPBC23E6.02 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.501e-12 Identity = 39/126 (30.95%), Postives = 72/126 (57.14%), Query Frame = 3 Query: 15 DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 389 DK++IFSQF+ + + GIK+ + ++ + ++L F D + LL+ A ++GL+L+ V +++P W+ +EEQ + RAHR+G +P+++ + T+EE++L LQD R Sbjct: 884 DKILIFSQFVSFLELFTVPFRQEGIKYLMYTGGLSTAERNQALINFEVDPNVRVLLISLKAGNVGLNLTCANHVIILDPFWNPYIEEQAVDRAHRIGQDKPVNILRIVTNNTIEERVLA-LQDRKR 1008
BLAST of EY710046 vs. ExPASy Swiss-Prot
Match: RAD5_GIBZE (DNA repair protein RAD5 OS=Gibberella zeae GN=RAD5 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.560e-12 Identity = 42/118 (35.59%), Postives = 64/118 (54.24%), Query Frame = 3 Query: 18 KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 368 K ++FSQF + +IE LT A IKF + M + L+ F LL+ A +GL+L+ RVF+M+P W ++E Q I R HRMG + V+ ++ +VEE+ML+ Sbjct: 1004 KSVVFSQFTSFLSLIEPALTRANIKFLRLDGSMAQKARAAVLNEFTEKKGFTILLLSLRAGGVGLNLTSAGRVFMMDPWWSFAVEAQAIDRVHRMGQEAEVQVKRFVVKESVEERMLK 1121
BLAST of EY710046 vs. ExPASy Swiss-Prot
Match: SM3L2_ARATH (Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 OS=Arabidopsis thaliana GN=At5g22750 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.367e-12 Identity = 37/116 (31.90%), Postives = 65/116 (56.03%), Query Frame = 3 Query: 18 KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 362 K I+FSQ+ + +++ L+ F + + + K L F D S L LLM A +G++L+ + F+M+P W+ ++EEQ + R HR+G T+ + + ++GTVEE+M Sbjct: 881 KSILFSQWTAFLDLLQIPLSRNNFSFVRLDGTLSQQQREKVLKEFSEDGSILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKEVKIRRFIVKGTVEERM 996
BLAST of EY710046 vs. ExPASy Swiss-Prot
Match: RAD5_YARLI (DNA repair protein RAD5 OS=Yarrowia lipolytica GN=RAD5 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.660e-11 Identity = 40/130 (30.77%), Postives = 68/130 (52.31%), Query Frame = 3 Query: 3 KALPD--KVIIFSQFLEHIHVIEQQLT---VAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQ 377 K LP K ++FSQF ++ +I+ +L + +F G S ++ +K+ + + ++L G +GL+L F+M+P W + E Q I R HRMG T+ +HV + +VEE+ML+ Q Sbjct: 869 KQLPKDAKSVVFSQFTSYLDIIQTELRREKIQAFRFDGTLSRQQRTDVLKAFGLSKGSVLLISLKTGG---VGLNLVTANHAFIMDPWWTFAQEAQAIDRIHRMGQTKDVHVTRFIVENSVEEKMLKIQQ 995
BLAST of EY710046 vs. ExPASy Swiss-Prot
Match: HLTF_MOUSE (Helicase-like transcription factor OS=Mus musculus GN=Hltf PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.167e-11 Identity = 38/127 (29.92%), Postives = 70/127 (55.12%), Query Frame = 3 Query: 18 KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 389 K ++ SQF + +IE L +G F + M +++S+ F++ + + LL + +GL+L +RVFLM+P W+ + E+Q R HR+G + + + ++ +VEE ML+ +Q+T R Sbjct: 847 KSLVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQRFQNTEAGSPTIMLLSLKAGGVGLNLCAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK-IQNTKR 972 The following BLAST results are available for this feature:
BLAST of EY710046 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY710046 ID=EY710046; Name=EY710046; organism=Citrus sinensis; type=EST; length=963bpback to top |