EY710044

Overview
NameEY710044
Unique NameEY710044
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1161
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710044 vs. ExPASy Swiss-Prot
Match: ODPA_PEA (Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 1.434e-63
Identity = 129/196 (65.82%), Postives = 145/196 (73.98%), Query Frame = 1
Query:  103 TNILKPLTNSFFLHRPISTDTTP-LTIETSVPFTSHQCEAPSRSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSIITAYRDHCTFLGRGGTLLEVFSELMGRKDGCSHGKRGSMHF*KKDFRLFREATGIVGAQNSFKAGGFGFPRKNTPKEETGDVWQRDGKTGQ 687
            +N+  P + +F L+RPIS+DTT  LTIETS+PFT+H C+ PSRSV T+P ELLSFFR MA MRRMEIAADSLYKA L+RGFCHLYDGQEAVA+GMEAG TKKD IITAYRDHCTFLGRGGTLL V++ELMGR+DGCS GK GSMHF KKD   F    GIVGAQ      G  F +K    E        DG   Q
Sbjct:   16 SNLFNPFSAAFTLNRPISSDTTATLTIETSLPFTAHNCDPPSRSVTTSPSELLSFFRTMALMRRMEIAADSLYKANLIRGFCHLYDGQEAVAVGMEAGTTKKDCIITAYRDHCTFLGRGGTLLRVYAELMGRRDGCSKGKGGSMHFYKKDSG-FYGGHGIVGAQVPLGC-GLAFGQKYLKDESVTFALYGDGAANQ 209          
BLAST of EY710044 vs. ExPASy Swiss-Prot
Match: ODPA2_ARATH (Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial OS=Arabidopsis thaliana GN=IAR4 PE=1 SV=2)

HSP 1 Score: 236.884 bits (603), Expect = 1.753e-61
Identity = 120/183 (65.57%), Postives = 140/183 (76.50%), Query Frame = 1
Query:  139 LHRPISTDTTPLTIETSVPFTSHQCEAPSRSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSIITAYRDHCTFLGRGGTLLEVFSELMGRKDGCSHGKRGSMHF*KKDFRLFREATGIVGAQNSFKAGGFGFPRKNTPKEETGDVWQRDGKTGQ 687
            + R +STD++P+TIET+VPFTSH CE+PSRSVET+ +E+L+FFR MA MRRMEIAADSLYKAKL+RGFCHLYDGQEA+A+GMEA ITKKD+IIT+YRDHCTF+GRGG L++ FSELMGRK GCSHGK GSMHF KKD   F    GIVGAQ      G  F +K    E        DG   Q
Sbjct:   25 IRRHVSTDSSPITIETAVPFTSHLCESPSRSVETSSEEILAFFRDMARMRRMEIAADSLYKAKLIRGFCHLYDGQEALAVGMEAAITKKDAIITSYRDHCTFIGRGGKLVDAFSELMGRKTGCSHGKGGSMHFYKKD-ASFYGGHGIVGAQIPLGC-GLAFAQKYNKDEAVTFALYGDGAANQ 205          
BLAST of EY710044 vs. ExPASy Swiss-Prot
Match: ODPA1_ARATH (Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial OS=Arabidopsis thaliana GN=At1g59900 PE=1 SV=2)

HSP 1 Score: 233.032 bits (593), Expect = 2.531e-60
Identity = 126/193 (65.28%), Postives = 143/193 (74.09%), Query Frame = 1
Query:  109 ILKPLTNSFFLHRPISTDTTPLTIETSVPFTSHQCEAPSRSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSIITAYRDHCTFLGRGGTLLEVFSELMGRKDGCSHGKRGSMHF*KKDFRLFREATGIVGAQNSFKAGGFGFPRKNTPKEETGDVWQRDGKTGQ 687
            I +P + +F   R ISTDTTP+TIETS+PFT+H C+ PSRSVE++ +ELL FFR MA MRRMEIAADSLYKAKL+RGFCHLYDGQEAVAIGMEA ITKKD+IITAYRDHC FLGRGG+L EVFSELMGR+ GCS GK GSMHF KK+   F    GIVGAQ      G  F +K   +E        DG   Q
Sbjct:   13 ITRPFSAAF--SRLISTDTTPITIETSLPFTAHLCDPPSRSVESSSQELLDFFRTMALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAIGMEAAITKKDAIITAYRDHCIFLGRGGSLHEVFSELMGRQAGCSKGKGGSMHFYKKE-SSFYGGHGIVGAQVPLGC-GIAFAQKYNKEEAVTFALYGDGAANQ 201          
BLAST of EY710044 vs. ExPASy Swiss-Prot
Match: ODPA_SOLTU (Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 4.773e-59
Identity = 120/195 (61.54%), Postives = 144/195 (73.85%), Query Frame = 1
Query:  106 NILKPLTNSFFLHRPISTDTTP-LTIETSVPFTSHQCEAPSRSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSIITAYRDHCTFLGRGGTLLEVFSELMGRKDGCSHGKRGSMHF*KKDFRLFREATGIVGAQNSFKAGGFGFPRKNTPKEETGDVWQRDGKTGQ 687
            +I+KPL+ +    R +S+D+T  +T+ETS+PFTSH  + PSRSVET+PKEL++FF+ M  MRRMEIAADSLYKAKL+RGFCHLYDGQEAVA+GMEA ITKKD IITAYRDHC FLGRGGTL+E F+ELMGR+DGCS GK GSMHF KK+   F    GIVGAQ      G  F +K   ++        DG   Q
Sbjct:   11 HIMKPLSAAVCATRRLSSDSTATITVETSLPFTSHNIDPPSRSVETSPKELMTFFKDMTEMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITKKDCIITAYRDHCIFLGRGGTLVEAFAELMGRRDGCSRGKGGSMHFYKKESG-FYGGHGIVGAQVPLGI-GLAFAQKYKKEDYVTFAMYGDGAANQ 203          
BLAST of EY710044 vs. ExPASy Swiss-Prot
Match: ODPA_DICDI (Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial OS=Dictyostelium discoideum GN=pdhA PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 4.498e-33
Identity = 73/136 (53.68%), Postives = 89/136 (65.44%), Query Frame = 1
Query:  202 SHQCEAPSRSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSIITAYRDHCTFLGRGGTLLEVFSELMGRKDGCSHGKRGSMHF*KKDFRLFREATGIVGAQNSFKAG 609
            ++ C+ PS S  T   EL+SFF +M+  RR+E   D LYK KL+RGFCHLY GQEAV  G+E+ ITK D IITAYRDH   L RG T  E+F+EL+ ++ GCS GK GSMH   K+   F    GIVGAQ    AG
Sbjct:   35 TYLCDGPSDSTVTNKDELISFFTEMSRFRRLETVCDGLYKKKLIRGFCHLYTGQEAVCAGLESAITKDDHIITAYRDHTYMLSRGATPEEIFAELLMKETGCSKGKGGSMHMFTKN---FYGGNGIVGAQCPLGAG 167          
BLAST of EY710044 vs. ExPASy Swiss-Prot
Match: ODPA_SCHPO (Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial OS=Schizosaccharomyces pombe GN=pda1 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 4.210e-31
Identity = 80/173 (46.24%), Postives = 103/173 (59.54%), Query Frame = 1
Query:  169 PLTIETSVPFTSHQCEAPSRSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSIITAYRDHCTFLGRGGTLLEVFSELMGRKDGCSHGKRGSMHF*KKDFRLFREATGIVGAQNSFKAGGFGFPRKNTPKEETGDVWQRDGKTGQ 687
            P+ ++ SV F  ++ + PS  +E T  ELL  + +M T+RR+E+A D+LYKAK +RGFCHL  GQEAVA G+E  IT  DSIIT+YR H     RG ++  +  ELMGR+ G S GK GSMH   K+   F    GIVGAQ    A G GF +K   K  T      DG + Q
Sbjct:   51 PVKLDDSV-FEGYKIDVPSTEIEVTKGELLGLYEKMVTIRRLELACDALYKAKKIRGFCHLSIGQEAVAAGIEGAITLDDSIITSYRCHGFAYTRGLSIRSIIGELMGRQCGASKGKGGSMHIFAKN---FYGGNGIVGAQIPLGA-GIGFAQKYLEKPTTTFALYGDGASNQ 218          
BLAST of EY710044 vs. ExPASy Swiss-Prot
Match: ODPA_YEAST (Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial OS=Saccharomyces cerevisiae GN=PDA1 PE=1 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 5.147e-29
Identity = 75/157 (47.77%), Postives = 95/157 (60.51%), Query Frame = 1
Query:  175 TIETSVP---FTSHQCEAPSRSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSIITAYRDHCTFLGRGGTLLEVFSELMGRKDGCSHGKRGSMHF*KKDFRLFREATGIVGAQNSFKAG-GFGFPRKN 633
            T++  +P   F S+  E P  S ET+   LL  ++ M  +RRME+A D+LYKAK +RGFCHL  GQEA+A+G+E  ITK DSIIT+YR H     RG ++  V +ELMGR+ G S+GK GSMH        F    GIVGAQ    AG  F    KN
Sbjct:   52 TVQIELPESSFESYMLEPPDLSYETSKATLLQMYKDMVIIRRMEMACDALYKAKKIRGFCHLSVGQEAIAVGIENAITKLDSIITSYRCHGFTFMRGASVKAVLAELMGRRAGVSYGKGGSMHLYAPG---FYGGNGIVGAQVPLGAGLAFAHQYKN 205          
BLAST of EY710044 vs. ExPASy Swiss-Prot
Match: ODPA_PONAB (Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Pongo abelii GN=PDHA1 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 3.336e-28
Identity = 72/158 (45.57%), Postives = 91/158 (57.59%), Query Frame = 1
Query:  214 EAPSRSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSIITAYRDHCTFLGRGGTLLEVFSELMGRKDGCSHGKRGSMHF*KKDFRLFREATGIVGAQNSFKAGGFGFPRKNTPKEETGDVWQRDGKTGQ 687
            E P  +   T ++ L ++R M T+RRME+ AD LYK K++RGFCHL DGQEA  +G+EAGI   D +ITAYR H     RG ++ E+ +EL GRK GC+ GK GSMH   K+   F    GIVGAQ    A G     K   K+E       DG   Q
Sbjct:   48 EGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSMHMYAKN---FYGGNGIVGAQVPLGA-GIALACKYNGKDEVCLTLYGDGAANQ 201          
BLAST of EY710044 vs. ExPASy Swiss-Prot
Match: ODPA_PANTR (Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Pan troglodytes GN=PDHA1 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 3.336e-28
Identity = 72/158 (45.57%), Postives = 91/158 (57.59%), Query Frame = 1
Query:  214 EAPSRSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSIITAYRDHCTFLGRGGTLLEVFSELMGRKDGCSHGKRGSMHF*KKDFRLFREATGIVGAQNSFKAGGFGFPRKNTPKEETGDVWQRDGKTGQ 687
            E P  +   T ++ L ++R M T+RRME+ AD LYK K++RGFCHL DGQEA  +G+EAGI   D +ITAYR H     RG ++ E+ +EL GRK GC+ GK GSMH   K+   F    GIVGAQ    A G     K   K+E       DG   Q
Sbjct:   48 EGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSMHMYAKN---FYGGNGIVGAQVPLGA-GIALACKYNGKDEVCLTLYGDGAANQ 201          
BLAST of EY710044 vs. ExPASy Swiss-Prot
Match: ODPA_HUMAN (Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Homo sapiens GN=PDHA1 PE=1 SV=3)

HSP 1 Score: 126.331 bits (316), Expect = 3.336e-28
Identity = 72/158 (45.57%), Postives = 91/158 (57.59%), Query Frame = 1
Query:  214 EAPSRSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSIITAYRDHCTFLGRGGTLLEVFSELMGRKDGCSHGKRGSMHF*KKDFRLFREATGIVGAQNSFKAGGFGFPRKNTPKEETGDVWQRDGKTGQ 687
            E P  +   T ++ L ++R M T+RRME+ AD LYK K++RGFCHL DGQEA  +G+EAGI   D +ITAYR H     RG ++ E+ +EL GRK GC+ GK GSMH   K+   F    GIVGAQ    A G     K   K+E       DG   Q
Sbjct:   48 EGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSMHMYAKN---FYGGNGIVGAQVPLGA-GIALACKYNGKDEVCLTLYGDGAANQ 201          
The following BLAST results are available for this feature:
BLAST of EY710044 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
ODPA_PEA1.434e-6365.82Pyruvate dehydrogenase E1 component subunit alpha,... [more]
ODPA2_ARATH1.753e-6165.57Pyruvate dehydrogenase E1 component subunit alpha-... [more]
ODPA1_ARATH2.531e-6065.28Pyruvate dehydrogenase E1 component subunit alpha-... [more]
ODPA_SOLTU4.773e-5961.54Pyruvate dehydrogenase E1 component subunit alpha,... [more]
ODPA_DICDI4.498e-3353.68Pyruvate dehydrogenase E1 component subunit alpha,... [more]
ODPA_SCHPO4.210e-3146.24Pyruvate dehydrogenase E1 component subunit alpha,... [more]
ODPA_YEAST5.147e-2947.77Pyruvate dehydrogenase E1 component subunit alpha,... [more]
ODPA_PONAB3.336e-2845.57Pyruvate dehydrogenase E1 component subunit alpha,... [more]
ODPA_PANTR3.336e-2845.57Pyruvate dehydrogenase E1 component subunit alpha,... [more]
ODPA_HUMAN3.336e-2845.57Pyruvate dehydrogenase E1 component subunit alpha,... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-111-C07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710044 ID=EY710044; Name=EY710044; organism=Citrus sinensis; type=EST; length=1161bp
CCCGGGTCCGGGAATCCCGGGTCGACCCCGCGTCCGCCACTTGCAGGAAA
AATCAACGACGAGATGGCTCTATCAAAACTCTCCTCCTCATCGTCTCTCT
CCACAAATATCCTCAAACCCCTAACCAACTCCTTTTTCCTCCACCGTCCG
ATCTCCACCGACACCACACCCCTAACAATTGAAACATCCGTACCTTTCAC
GTCTCACCAATGCGAAGCGCCTTCACGCTCCGTCGAAACAACTCCAAAAG
AACTCCTCTCATTCTTCCGCCAGATGGCTACCATGCGACGGATGGAGATC
GCTGCCGATTCTCTCTACAAGGCAAAACTCGTCCGCGGATTCTGCCACCT
GTACGACGGACAAGAAGCGGTGGCCATCGGCATGGAAGCCGGAATTACCA
AGAAGGACAGCATCATAACCGCTTATCGTGATCACTGCACGTTCCTTGGT
CGCGGTGGGACCCTCTTGGAGGTTTTCTCGGAGCTGATGGGGAGAAAGGA
CGGTTGTTCTCATGGAAAAAGGGGTTCGATGCATTTTTAAAAGAAGGACT
TCCGGCTTTTTAGGGAGGCCACGGGAATTGTGGGGGCTCAAAATTCCTTT
AAGGCTGGTGGATTTGGCTTTCCGCGCAAAAATACTCCAAAGGAAGAAAC
GGGGGACGTTTGGCAACGGGATGGGAAAACGGGGCAACCAAAACCCAGGG
GCCCAGTTGGTTCCAGGGCTCCTCAATTATAACAACCGCTTTTGGGGAAA
TTGGCCGGGGAAAATTTTGGGGTCCGGCGAAAAAAAAATCCCCCTTAGGG
AAATGGGGGGACAAGCGTGAAAGGGAAAAAGCCCCCAAAAAAAAATCCCC
CTCAAAAACCACCCAAAGGGGGGGGGGGAAATTAGGGTTTCCCCGGGGTT
TTAAAAGGGGGGGGGAAGGGGAATGGGGGGAAGAGCCCCCTTGTGGGGTG
GCCAAAAAAACAAGAGGGCTGGGCGGAAAAGTGTTTTGTTGCGGCCATGA
AGGGGAAACCCCACATGGGCTCCCTTCTAAAAAAAAGAAAGAAAGGGGGG
GGGCCCCCCCCCTCTTATTTGGAATATAATACCATATTCTATTGTATGGA
AGAAGAGAAGAGAGGGAGGGGAGGAGAGACAAACCACACCCCCCCCAACA
CCACTAATTCA
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