EY710043
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY710043 vs. ExPASy Swiss-Prot
Match: DXS_ORYSJ (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=CLA1 PE=2 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 2.328e-29 Identity = 85/218 (38.99%), Postives = 121/218 (55.50%), Query Frame = 1 Query: 97 TMALSSGIAIGAKQSISPFFTVSQPSLSYRKQNFCLRASAEKNSSDGEEATKMVMRKEKSGWKIDFSEEKPPTPLLDTINYPIHMKNLSTEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKIYMGMLAIRLMYTKFLTGKNSKMNTLEEKLRGLEGFPKKKEKLS*SIFGGKGNKFPQTSPAGPW*GLAQRGKFLGGKKKI 750 T ++S G +GA F + ++ Q+ R + S + + +E + ++ ++PPTPLLDT+NYPIHMKNLS ++L+QLA ELR+D++ VSKTGGHL ++LGVVELT+ALH VFNTP DKI + + + K LTG+ KM T+ + GL GF K+ E S G G+ S A G+A GGK + Sbjct: 5 TFSISRGGFVGALPQEGHFAPAAAELSLHKLQS---RPHKARRRSSSSISASLSTEREAA----EYHSQRPPTPLLDTVNYPIHMKNLSLKELQQLADELRSDVIFHVSKTGGHLGSSLGVVELTVALHYVFNTPQDKI-LWDVGHQSYPHKILTGRRDKMPTMRQ-TNGLSGFTKRSESEYDSF--GTGHSSTTISAA---LGMAVGRDLKGGKNNV 208
BLAST of EY710043 vs. ExPASy Swiss-Prot
Match: DXS_ARATH (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=CLA1 PE=1 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 8.845e-29 Identity = 70/145 (48.28%), Postives = 97/145 (66.90%), Query Frame = 1 Query: 199 CLRASAEKNSSDGEEATKMVMRKEKSGWKIDFSEEKPPTPLLDTINYPIHMKNLSTEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKIYMGMLAIRLMYTKFLTGKNSKMNTLEEKLRGLEGFPKKKE 633 CL+ + N+S K+ + G ++ +PPTPLLDTINYPIHMKNLS ++L+QL+ ELR+D++ +VSKTGGHL ++LGVVELT+ALH +FNTP DKI + + + K LTG+ KM T+ + GL GF K+ E Sbjct: 42 CLKPN---NNSHSNRRAKVCASLAEKG---EYYSNRPPTPLLDTINYPIHMKNLSVKELKQLSDELRSDVIFNVSKTGGHLGSSLGVVELTVALHYIFNTPQDKI-LWDVGHQSYPHKILTGRRGKMPTMRQ-TNGLSGFTKRGE 178
BLAST of EY710043 vs. ExPASy Swiss-Prot
Match: DXS_CAPAN (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Capsicum annuum GN=TKT2 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.277e-27 Identity = 63/115 (54.78%), Postives = 86/115 (74.78%), Query Frame = 1 Query: 289 DFSEEKPPTPLLDTINYPIHMKNLSTEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKIYMGMLAIRLMYTKFLTGKNSKMNTLEEKLRGLEGFPKKKE 633 ++ ++PPTP++DTINYPIHMKNLS ++L+QLA ELR+D + +VSKTGGHL ++LGVVELT+ALH VFN P D+I + + + K LTG+ KM+TL + GL GF K+ E Sbjct: 65 EYYTQRPPTPIVDTINYPIHMKNLSLKELKQLADELRSDTIFNVSKTGGHLGSSLGVVELTVALHYVFNAPQDRI-LWDVGHQSYPHKILTGRREKMSTLRQ-TNGLAGFTKRSE 177
BLAST of EY710043 vs. ExPASy Swiss-Prot
Match: DXS_RHIME (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium meliloti GN=dxs PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 8.019e-22 Identity = 52/109 (47.71%), Postives = 77/109 (70.64%), Query Frame = 1 Query: 307 PPTPLLDTINYPIHMKNLSTEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKIYMGMLAIRLMYTKFLTGKNSKMNTLEEKLRGLEGFPKKKE 633 P TPLLD ++YP +K + DL QLAAELRA++V++VS+TGGHL A LGVVELT+A+H++F+TP D++ + + K LTG+ ++ TL ++ GL GF ++ E Sbjct: 10 PATPLLDKVDYPDDLKKIDDRDLPQLAAELRAEMVDAVSRTGGHLGAGLGVVELTIAIHKIFDTPHDRLIFD-VGHQCYPHKILTGRRDRIRTLRQE-DGLSGFTRRAE 116
BLAST of EY710043 vs. ExPASy Swiss-Prot
Match: DXS2_JANSC (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Jannaschia sp. (strain CCS1) GN=dxs2 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 8.019e-22 Identity = 52/111 (46.85%), Postives = 78/111 (70.27%), Query Frame = 1 Query: 301 EKPPTPLLDTINYPIHMKNLSTEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKIYMGMLAIRLMYTKFLTGKNSKMNTLEEKLRGLEGFPKKKE 633 ++P TP+LD +NYP ++ +S DL Q A ELRA+++++VS+TGGHL ++LGVVEL++A+H VFNTP DK+ + + K LTG+ ++ TL +K GL GF K+ E Sbjct: 2 DRPHTPILDQVNYPSDLRRMSNADLAQCADELRAEVISAVSETGGHLGSSLGVVELSVAIHAVFNTPYDKLVWD-VGHQCYPHKVLTGRRDRIRTLRQK-DGLSGFTKRSE 110
BLAST of EY710043 vs. ExPASy Swiss-Prot
Match: DXS_AGRT5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=dxs PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.047e-21 Identity = 51/109 (46.79%), Postives = 76/109 (69.72%), Query Frame = 1 Query: 307 PPTPLLDTINYPIHMKNLSTEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKIYMGMLAIRLMYTKFLTGKNSKMNTLEEKLRGLEGFPKKKE 633 P TPLLD +N+P +K + DL +LA ELR +++++VSKTGGHL A LGVVELT+A+H+VFNTP+D++ + + K LTG+ ++ TL ++ GL GF ++ E Sbjct: 5 PQTPLLDRVNFPSDLKEIDDRDLPELARELRDEMIDAVSKTGGHLGAGLGVVELTIAIHKVFNTPEDRLIFD-VGHQCYPHKILTGRRDRIRTLRQE-DGLSGFTRRAE 111
BLAST of EY710043 vs. ExPASy Swiss-Prot
Match: DXS_LARHH (1-deoxy-D-xylulose-5-phosphate synthase OS=Laribacter hongkongensis (strain HLHK9) GN=dxs PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 6.788e-21 Identity = 53/107 (49.53%), Postives = 74/107 (69.16%), Query Frame = 1 Query: 313 TPLLDTINYPIHMKNLSTEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKIYMGMLAIRLMYTKFLTGKNSKMNTLEEKLRGLEGFPKKKE 633 TPLLDTI P ++ L + L QLA ELR +V+SVS+TGGH ++NLG +ELT+ALH V+NTPDD++ + + K LTG+ +M+T+ +K GL GFPK+ E Sbjct: 4 TPLLDTIQIPADLRELDRKQLPQLARELRDFLVDSVSQTGGHFASNLGSIELTIALHYVYNTPDDRLVWD-VGHQTYPHKILTGRRDRMHTMRQK-GGLAGFPKRDE 108
BLAST of EY710043 vs. ExPASy Swiss-Prot
Match: DXS1_RHOS4 (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=dxs1 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 6.788e-21 Identity = 54/110 (49.09%), Postives = 76/110 (69.09%), Query Frame = 1 Query: 304 KPPTPLLDTINYPIHMKNLSTEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKIYMGMLAIRLMYTKFLTGKNSKMNTLEEKLRGLEGFPKKKE 633 +P TPLLD + P MK LS +LE+LA E+R+++++ V++TGGHL ++LGVVELT+ALH VFNTP DK+ + + K LTG+ +M TL +K GL GF K+ E Sbjct: 7 RPETPLLDRVCCPADMKALSDAELERLADEVRSEVISVVAETGGHLGSSLGVVELTVALHAVFNTPTDKLVWD-VGHQCYPHKILTGRREQMRTLRQK-GGLSGFTKRSE 114
BLAST of EY710043 vs. ExPASy Swiss-Prot
Match: DXS_SPHWW (1-deoxy-D-xylulose-5-phosphate synthase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=dxs PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 8.866e-21 Identity = 54/111 (48.65%), Postives = 76/111 (68.47%), Query Frame = 1 Query: 301 EKPPTPLLDTINYPIHMKNLSTEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKIYMGMLAIRLMYTKFLTGKNSKMNTLEEKLRGLEGFPKKKE 633 ++PPTPLLDT++ P ++ L DL QLA ELRA+++++VS TGGHL A LGVVELT+ALH VF+TP D + + + + K LTG+ ++ TL + GL GF K+ E Sbjct: 3 DRPPTPLLDTVSTPEDLRRLKPADLRQLADELRAEMISAVSVTGGHLGAGLGVVELTVALHYVFDTPRD-VLIWDVGHQAYPHKILTGRRDRIRTLRQG-GGLSGFTKRSE 111
BLAST of EY710043 vs. ExPASy Swiss-Prot
Match: DXS_BARBK (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=dxs PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 8.866e-21 Identity = 54/112 (48.21%), Postives = 75/112 (66.96%), Query Frame = 1 Query: 304 KPPTPLLDTINYPIHMKNLSTEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKIYMGMLAIRLMYTKFLTGKNSKMNTLEEKLRGLEGFPKKKEKL 639 +P TPLLD + P+ ++ L DL +LA ELRA++++ VS TGGHL A LGVVELT+ALH +FNTPDD+I + + K LTG+ K+ TL ++ GL GF K+ E + Sbjct: 3 RPLTPLLDCVLSPLDLRALPASDLARLADELRAEMIDVVSVTGGHLGAGLGVVELTIALHYIFNTPDDRIIWD-VGHQAYPHKILTGRRDKIRTLRQE-GGLSGFTKRSESI 112 The following BLAST results are available for this feature:
BLAST of EY710043 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 454
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Sequences
The
following sequences are available for this feature:
EST sequence >EY710043 ID=EY710043; Name=EY710043; organism=Citrus sinensis; type=EST; length=966bpback to top |