EY710039
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY710039 vs. ExPASy Swiss-Prot
Match: AB3F_ARATH (ABC transporter F family member 3 OS=Arabidopsis thaliana GN=ABCF3 PE=2 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.829e-62 Identity = 119/136 (87.50%), Postives = 126/136 (92.65%), Query Frame = 1 Query: 1 IISFSDASFGYPGGPILFKNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGELQPSSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNLALQPMYTLSGFGCSGGTNSRPCF 408 IISFSDASFGYPGGP+LF+NLNFGIDLDSRIAMVGPNGIGKSTILKLI+G+LQPSSGTVFRSAKVR+AVFSQHHVDGLDLSSNPLLYMMRC+PGVPEQKLR+HLGS GVTGNLALQPMYTL SGG SR F Sbjct: 503 IISFSDASFGYPGGPLLFRNLNFGIDLDSRIAMVGPNGIGKSTILKLISGDLQPSSGTVFRSAKVRVAVFSQHHVDGLDLSSNPLLYMMRCYPGVPEQKLRSHLGSLGVTGNLALQPMYTL-----SGGQKSRVAF 633 HSP 2 Score: 85.1149 bits (209), Expect = 5.546e-18 Identity = 43/60 (71.67%), Postives = 49/60 (81.67%), Query Frame = 2 Query: 335 ILLFNRCTLCLDLDAVEALIQGLVLFQGGILMVSHDKHLISGSVEELWVVSKSKATPFLG 514 +LL + + LDLDAVEALIQGLVLFQGGI MVSHD+HLISGSV+ELWVVS + PF G Sbjct: 643 LLLLDEPSNHLDLDAVEALIQGLVLFQGGICMVSHDEHLISGSVDELWVVSDGRIAPFHG 702 HSP 3 Score: 27.335 bits (59), Expect = 5.546e-18 Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = 3 Query: 513 GTFHDYKKKLQS 548 GTFHDYKK LQS Sbjct: 702 GTFHDYKKLLQS 713
BLAST of EY710039 vs. ExPASy Swiss-Prot
Match: YB89_SCHPO (Uncharacterized ABC transporter ATP-binding protein C29A3.09c OS=Schizosaccharomyces pombe GN=SPBC29A3.09c PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.414e-30 Identity = 73/151 (48.34%), Postives = 98/151 (64.90%), Query Frame = 1 Query: 1 IISFSDASFGY-PGGPILFKNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGELQPSSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNLALQPMYTLSG-------FGCSGGTNSRPCFVPRRDSH 429 I+ SD +F Y PG PIL K+++ + +DSRI +VGPNG GKST+LKL+ +L P+SG V R ++RIA F+QHHVD LDL+ N L ++ + FPG E++ R HLG+FGV+G LALQ M TLSG F C G N + +H Sbjct: 517 ILQMSDVNFEYVPGHPIL-KHVDIDVQMDSRIGVVGPNGAGKSTMLKLLIEQLHPTSGIVSRHPRLRIAYFAQHHVDTLDLNLNALSFLAKTFPGKGEEEYRRHLGAFGVSGPLALQKMITLSGGQKSRVAFACLGLQNPHILILDEPTNH 666
BLAST of EY710039 vs. ExPASy Swiss-Prot
Match: AB1F_ARATH (ABC transporter F family member 1 OS=Arabidopsis thaliana GN=ABCF1 PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.846e-30 Identity = 63/122 (51.64%), Postives = 86/122 (70.49%), Query Frame = 1 Query: 1 IISFSDASFGYPGGPILFKNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGELQPSSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNLALQPMYTLS 366 ++ F + SFGY +++KN++FG+DLDSR+A+VGPNG GKST+LKL+ GEL P+ G V R ++IA + QH + LDL LLYMMR FPG E+K+RA +G FG+TG + PM LS Sbjct: 379 VLQFVEVSFGYTPDYLIYKNIDFGVDLDSRVALVGPNGAGKSTLLKLMTGELHPTEGMVRRHNHLKIAQYHQHLAEKLDLELPALLYMMREFPGTEEEKMRAAIGRFGLTGKAQVMPMKNLS 500
BLAST of EY710039 vs. ExPASy Swiss-Prot
Match: GCN20_YEAST (Protein GCN20 OS=Saccharomyces cerevisiae GN=GCN20 PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.939e-29 Identity = 63/136 (46.32%), Postives = 90/136 (66.18%), Query Frame = 1 Query: 1 IISFSDASFGYPGGPILFKNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGELQPSSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNLALQPMYTLSGFGCSGGTNSRPCF 408 II D SFGY +L K++N + +DSRIA+VG NG GK+T+LK++ +L+P G V R+ ++RI F+QHHVD +DL+++ + +M + FPG +++ R HLGSFG+TG L LQ M L SGG SR F Sbjct: 531 IIQLQDVSFGYDENNLLLKDVNLDVQMDSRIALVGANGCGKTTLLKIMMEQLRPLKGFVSRNPRLRIGYFTQHHVDSMDLTTSAVDWMSKSFPGKTDEEYRRHLGSFGITGTLGLQKMQLL-----SGGQKSRVAF 661
BLAST of EY710039 vs. ExPASy Swiss-Prot
Match: ABCF4_DICDI (ABC transporter F family member 4 OS=Dictyostelium discoideum GN=abcF4 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.257e-28 Identity = 60/123 (48.78%), Postives = 84/123 (68.29%), Query Frame = 1 Query: 1 IISFSDASFGYPGGPILFKNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGELQPSSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNLALQPMYTLSG 369 ++ F D FGY G P +FK L+ GID+DS+IA+VG NG+GKST++KL+ G+L ++G + RS K+R+A FSQH VD LD + P+ Y F P Q++R HLG FG+ +L L + TLSG Sbjct: 922 LLVFKDVCFGYEGRPTMFKKLDIGIDMDSKIALVGMNGVGKSTLMKLMNGDLHETTGYIERSRKMRVARFSQHFVDQLDTTMTPIEYFQSKFNNPPVQQIRNHLGRFGICNSLPLHKITTLSG 1044
BLAST of EY710039 vs. ExPASy Swiss-Prot
Match: YJQ1_SCHPO (Uncharacterized ABC transporter ATP-binding protein C825.01 OS=Schizosaccharomyces pombe GN=SPCC825.01 PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.603e-26 Identity = 57/121 (47.11%), Postives = 83/121 (68.60%), Query Frame = 1 Query: 4 ISFSDASFGYPGGPILFKNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGELQPSSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNLALQPMYTLS 366 I F D SF YPGGP +F LNFG+DL SR+A+VGPNG GK+T++KLI ++QPS+G+V R +R+A+F+QH D LD+ + + ++ F PE ++R +G +G+TG + PM LS Sbjct: 594 IKFQDVSFNYPGGPTIFSKLNFGLDLKSRVALVGPNGAGKTTLIKLILEKVQPSTGSVVRHHGLRLALFNQHMGDQLDMRLSAVEWLRTKFGNKPEGEMRRIVGRYGLTGKSQVIPMGQLS 714
BLAST of EY710039 vs. ExPASy Swiss-Prot
Match: ABCF2_MOUSE (ATP-binding cassette sub-family F member 2 OS=Mus musculus GN=Abcf2 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.984e-25 Identity = 56/124 (45.16%), Postives = 84/124 (67.74%), Query Frame = 1 Query: 1 IISFSDASFGYP-GGPILFKNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGELQPSSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCFPGVPE-QKLRAHLGSFGVTGNLALQPMYTLS 366 +I + SF Y GP ++ NL FGIDLD+R+A+VGPNG GKST+LKL+ GEL P+ G + + + V+I + QH + LDL +PL YMM+C+P + E +++R +G +G+TG + P+ LS Sbjct: 400 VIMVQNVSFKYTKDGPCIYNNLEFGIDLDTRVALVGPNGAGKSTLLKLLTGELLPTDGMIRKHSHVKIGRYHQHLQEQLDLDLSPLEYMMKCYPEIKEKEEMRKIIGRYGLTGKQQVSPIRNLS 523
BLAST of EY710039 vs. ExPASy Swiss-Prot
Match: ABCF2_HUMAN (ATP-binding cassette sub-family F member 2 OS=Homo sapiens GN=ABCF2 PE=1 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 3.984e-25 Identity = 56/124 (45.16%), Postives = 84/124 (67.74%), Query Frame = 1 Query: 1 IISFSDASFGYP-GGPILFKNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGELQPSSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCFPGVPE-QKLRAHLGSFGVTGNLALQPMYTLS 366 +I + SF Y GP ++ NL FGIDLD+R+A+VGPNG GKST+LKL+ GEL P+ G + + + V+I + QH + LDL +PL YMM+C+P + E +++R +G +G+TG + P+ LS Sbjct: 395 VIMVQNVSFKYTKDGPCIYNNLEFGIDLDTRVALVGPNGAGKSTLLKLLTGELLPTDGMIRKHSHVKIGRYHQHLQEQLDLDLSPLEYMMKCYPEIKEKEEMRKIIGRYGLTGKQQVSPIRNLS 518
BLAST of EY710039 vs. ExPASy Swiss-Prot
Match: ABCF2_BOVIN (ATP-binding cassette sub-family F member 2 OS=Bos taurus GN=ABCF2 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.984e-25 Identity = 56/124 (45.16%), Postives = 84/124 (67.74%), Query Frame = 1 Query: 1 IISFSDASFGYP-GGPILFKNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGELQPSSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCFPGVPE-QKLRAHLGSFGVTGNLALQPMYTLS 366 +I + SF Y GP ++ NL FGIDLD+R+A+VGPNG GKST+LKL+ GEL P+ G + + + V+I + QH + LDL +PL YMM+C+P + E +++R +G +G+TG + P+ LS Sbjct: 397 VIMVQNVSFKYTKDGPCIYNNLEFGIDLDTRVALVGPNGAGKSTLLKLLTGELLPTDGMIRKHSHVKIGRYHQHLQEQLDLDLSPLEYMMKCYPEIKEKEEMRKIIGRYGLTGKQQVSPIRNLS 520
BLAST of EY710039 vs. ExPASy Swiss-Prot
Match: ARB1_YEAST (ABC transporter ATP-binding protein ARB1 OS=Saccharomyces cerevisiae GN=ARB1 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.186e-23 Identity = 57/126 (45.24%), Postives = 82/126 (65.08%), Query Frame = 1 Query: 1 IISFSDASFGYPGGPI--LFKNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGELQPSSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCFPGVPE--QKLRAHLGSFGVTGNLALQPMYTLS 366 +++F D SF Y P L+++LNFG+D+DSRIA+VGPNG+GKST+LK++ GEL P SG V R V++ V+SQH D LDL+ + L ++ + + + Q R LG +G+TG M TLS Sbjct: 392 VLAFDDISFHYESNPSENLYEHLNFGVDMDSRIALVGPNGVGKSTLLKIMTGELTPQSGRVSRHTHVKLGVYSQHSQDQLDLTKSALEFVRDKYSNISQDFQFWRGQLGRYGLTGEGQTVQMATLS 517 The following BLAST results are available for this feature:
BLAST of EY710039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >EY710039 ID=EY710039; Name=EY710039; organism=Citrus sinensis; type=EST; length=885bpback to top |