EY710032

Overview
NameEY710032
Unique NameEY710032
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length958
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710032 vs. ExPASy Swiss-Prot
Match: BAS1_SPIOL (2-Cys peroxiredoxin BAS1, chloroplastic OS=Spinacia oleracea GN=BAS1 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 8.673e-29
Identity = 81/132 (61.36%), Postives = 87/132 (65.91%), Query Frame = 3
Query:  225 LKSQVPRPVSLSRGSRSRKSFVVKASVEIPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFQ*PIC*I*KS*TQKYWVSQLTVCFPHLGMGPNKTKSQGAWVNLKYPLI 620
            L+S   R  SLS  S SR+SF VKA  +  PLVGN APDF AEAVFDQEFI VKLSDYIGKKYVILFFYPLDFTFVCPTEITAF        K  T+   VS  +V F HL       KS G   +L YPLI
Sbjct:   45 LRSGFARRSSLS--STSRRSFAVKAQADDLPLVGNKAPDFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRHSEFEKLNTEVLGVSVDSV-FSHLAWVQTDRKS-GGLGDLNYPLI 172          
BLAST of EY710032 vs. ExPASy Swiss-Prot
Match: BAS1A_ARATH (2-Cys peroxiredoxin BAS1, chloroplastic OS=Arabidopsis thaliana GN=BAS1 PE=1 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 8.673e-29
Identity = 81/132 (61.36%), Postives = 87/132 (65.91%), Query Frame = 3
Query:  225 LKSQVPRPVSLSRGSRSRKSFVVKASVEIPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFQ*PIC*I*KS*TQKYWVSQLTVCFPHLGMGPNKTKSQGAWVNLKYPLI 620
            L+S   R  SLS  S SR+SF VKA  +  PLVGN APDF AEAVFDQEFI VKLSDYIGKKYVILFFYPLDFTFVCPTEITAF        K  T+   VS  +V F HL       KS G   +L YPLI
Sbjct:   45 LRSGFARRSSLS--STSRRSFAVKAQADDLPLVGNKAPDFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRHSEFEKLNTEVLGVSVDSV-FSHLAWVQTDRKS-GGLGDLNYPLI 172          
BLAST of EY710032 vs. ExPASy Swiss-Prot
Match: BAS1_ORYSJ (2-Cys peroxiredoxin BAS1, chloroplastic OS=Oryza sativa subsp. japonica GN=BAS1 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.296e-28
Identity = 82/143 (57.34%), Postives = 90/143 (62.94%), Query Frame = 3
Query:  195 PRSFSGLRNPLKSQVPRPVSLSRGSRSRKSFVVKAS-VEIPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFQ*PIC*I*KS*TQKYWVSQLTVCFPHLGMGPNKTKSQGAWVNLKYPLI 620
            P S S  R P    +    S SR +R+  SFV +A  V+  PLVGN APDF AEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAF        K  T+   VS +   F HL       KS G   +LKYPLI
Sbjct:   28 PHSLSLPRAPAARPLRLSASSSRSARA-SSFVARAGGVDDAPLVGNKAPDFDAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYDEFEKLNTEILGVS-IDSVFSHLAWVQTDRKS-GGLGDLKYPLI 167          
BLAST of EY710032 vs. ExPASy Swiss-Prot
Match: BAS1_WHEAT (2-Cys peroxiredoxin BAS1, chloroplastic (Fragment) OS=Triticum aestivum GN=TSA PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 2.136e-27
Identity = 74/115 (64.35%), Postives = 82/115 (71.30%), Query Frame = 3
Query:  279 KSFVVKASVEIP-PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFQ*PIC*I*KS*TQKYWVSQLTVCFPHLGMGPNKTKSQGAWVNLKYPLI 620
            +SFV +A+ E   PLVGN APDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAF        K  T+   VS  +V F HL     + KS G   +LKYPL+
Sbjct:    5 RSFVARAAAEYDLPLVGNKAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRHEEFEKINTEILGVSVDSV-FSHLAWVQTERKS-GGLGDLKYPLV 117          
BLAST of EY710032 vs. ExPASy Swiss-Prot
Match: BAS1_HORVU (2-Cys peroxiredoxin BAS1, chloroplastic (Fragment) OS=Hordeum vulgare GN=BAS1 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.136e-27
Identity = 74/115 (64.35%), Postives = 82/115 (71.30%), Query Frame = 3
Query:  279 KSFVVKASVEIP-PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFQ*PIC*I*KS*TQKYWVSQLTVCFPHLGMGPNKTKSQGAWVNLKYPLI 620
            +SFV +A+ E   PLVGN APDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAF        K  T+   VS  +V F HL     + KS G   +LKYPL+
Sbjct:    5 RSFVARAAAEYDLPLVGNKAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRHEEFEKINTEILGVSVDSV-FSHLAWVQTERKS-GGLGDLKYPLV 117          
BLAST of EY710032 vs. ExPASy Swiss-Prot
Match: BAS1B_ARATH (2-Cys peroxiredoxin BAS1-like, chloroplastic OS=Arabidopsis thaliana GN=At5g06290 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 4.759e-27
Identity = 72/118 (61.02%), Postives = 80/118 (67.80%), Query Frame = 3
Query:  267 SRSRKSFVVKASVEIPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFQ*PIC*I*KS*TQKYWVSQLTVCFPHLGMGPNKTKSQGAWVNLKYPLI 620
            S SR++F VKA  +  PLVGN APDF AEAVFDQEFI VKLS+YIGKKYVILFFYPLDFTFVCPTEITAF        K  T+   VS  +V F HL       KS G   +L YPL+
Sbjct:   62 SASRRNFAVKAQADDLPLVGNKAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRYEEFEKLNTEVLGVSVDSV-FSHLAWVQTDRKS-GGLGDLNYPLV 177          
BLAST of EY710032 vs. ExPASy Swiss-Prot
Match: Y755_SYNY3 (Putative peroxiredoxin sll0755 OS=Synechocystis sp. (strain PCC 6803) GN=sll0755 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.399e-18
Identity = 37/52 (71.15%), Postives = 40/52 (76.92%), Query Frame = 3
Query:  321 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAF 476
            VG  APDF A A+ DQ F  VKLS Y GK Y++LFFYPLDFTFVCPTEI AF
Sbjct:    7 VGQPAPDFTATAIVDQSFQTVKLSTYRGK-YLVLFFYPLDFTFVCPTEIIAF 57          

HSP 2 Score: 36.965 bits (84), Expect = 1.399e-18
Identity = 32/99 (32.32%), Postives = 52/99 (52.53%), Query Frame = 1
Query:  457 PQKSLLFSDRYAEFEKAKHKNIGCLN*QCVFHTWAWVQTKRKVRGPG*I*STH*FC*NHP------NQFSKFQGNPKPGIGKIALKRILYLLKKKGILQ 735
            P + + FSDR++EF     + +G ++    F   AW+QT+RK+ G G I        N+P       + S+     +P  G IAL R L+++ ++GILQ
Sbjct:   51 PTEIIAFSDRHSEFTALDTEVVG-ISVDSEFSHLAWIQTERKMGGIGNI--------NYPLVSDLKKEISQAYNVLEPDAG-IAL-RGLFIIDREGILQ 138          
BLAST of EY710032 vs. ExPASy Swiss-Prot
Match: PRDX_ASCSU (Peroxiredoxin OS=Ascaris suum PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.006e-18
Identity = 34/53 (64.15%), Postives = 42/53 (79.25%), Query Frame = 3
Query:  318 LVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAF 476
            ++G  AP+F A AV D +F ++ LSDY GK YV+LFFYP+DFTFVCPTEI AF
Sbjct:    5 MIGKPAPEFTATAVVDGDFKSISLSDYKGK-YVVLFFYPMDFTFVCPTEIIAF 56          

HSP 2 Score: 36.965 bits (84), Expect = 4.006e-18
Identity = 25/63 (39.68%), Postives = 33/63 (52.38%), Query Frame = 2
Query:  500 KKLNTKILGVSTDSVFSTLGHGSKQNEKSGGLGEFEVPTNFAEITQTNFQNSK--GILNPESG 682
            KKL  ++L  STDS FS L        K GGLGE ++P     I+  N Q S+  G+L  + G
Sbjct:   64 KKLGVEVLAASTDSQFSHLA-WINTPRKQGGLGEMKIPI----ISDNNHQISRDYGVLKEDDG 121          
BLAST of EY710032 vs. ExPASy Swiss-Prot
Match: PRDX2_BOVIN (Peroxiredoxin-2 OS=Bos taurus GN=PRDX2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 6.766e-18
Identity = 38/52 (73.08%), Postives = 40/52 (76.92%), Query Frame = 3
Query:  321 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAF 476
            VG  AP+F A AV D  F  VKLSDY GK YV+LFFYPLDFTFVCPTEI AF
Sbjct:    9 VGKPAPEFQATAVVDGAFKEVKLSDYKGK-YVVLFFYPLDFTFVCPTEIVAF 59          

HSP 2 Score: 35.039 bits (79), Expect = 6.766e-18
Identity = 22/60 (36.67%), Postives = 32/60 (53.33%), Query Frame = 2
Query:  503 KLNTKILGVSTDSVFSTLGHGSKQNEKSGGLGEFEVPTNFAEITQTNFQNSKGILNPESG 682
            KLN ++LGVS DS F+ L        K GGLG   +P   A++T+    +  G+L  + G
Sbjct:   68 KLNCEVLGVSVDSQFTHLA-WINTPRKEGGLGPLNIPL-LADVTR-KLSSDYGVLKEDEG 124          
BLAST of EY710032 vs. ExPASy Swiss-Prot
Match: PRDX1_CHICK (Peroxiredoxin-1 OS=Gallus gallus GN=PRDX1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.672e-15
Identity = 35/53 (66.04%), Postives = 41/53 (77.36%), Query Frame = 3
Query:  321 VGNTAPDFAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAF 476
            +G  APDF A AV  D +F ++KLSDY GK YV+ FFYPLDFTFVCPTEI A+
Sbjct:    8 IGKPAPDFTATAVMPDGQFKDIKLSDYRGK-YVVFFFYPLDFTFVCPTEIIAY 59          

HSP 2 Score: 31.5722 bits (70), Expect = 1.672e-15
Identity = 20/61 (32.79%), Postives = 29/61 (47.54%), Query Frame = 2
Query:  500 KKLNTKILGVSTDSVFSTLGHGSKQNEKSGGLGEFEVPTNFAEITQTNFQNSKGILNPESG 682
            KK+N +I+G S DS F  L       +K GGLG  ++P      T+       G+L  + G
Sbjct:   67 KKINCEIIGASVDSHFCHLA-WINTPKKQGGLGTMKIP--LVSDTKRVIAKDYGVLKEDEG 124          
The following BLAST results are available for this feature:
BLAST of EY710032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
BAS1_SPIOL8.673e-2961.362-Cys peroxiredoxin BAS1, chloroplastic OS=Spinaci... [more]
BAS1A_ARATH8.673e-2961.362-Cys peroxiredoxin BAS1, chloroplastic OS=Arabido... [more]
BAS1_ORYSJ3.296e-2857.342-Cys peroxiredoxin BAS1, chloroplastic OS=Oryza s... [more]
BAS1_WHEAT2.136e-2764.352-Cys peroxiredoxin BAS1, chloroplastic (Fragment)... [more]
BAS1_HORVU2.136e-2764.352-Cys peroxiredoxin BAS1, chloroplastic (Fragment)... [more]
BAS1B_ARATH4.759e-2761.022-Cys peroxiredoxin BAS1-like, chloroplastic OS=Ar... [more]
Y755_SYNY31.399e-1871.15Putative peroxiredoxin sll0755 OS=Synechocystis sp... [more]
PRDX_ASCSU4.006e-1864.15Peroxiredoxin OS=Ascaris suum PE=2 SV=1[more]
PRDX2_BOVIN6.766e-1873.08Peroxiredoxin-2 OS=Bos taurus GN=PRDX2 PE=2 SV=1[more]
PRDX1_CHICK1.672e-1566.04Peroxiredoxin-1 OS=Gallus gallus GN=PRDX1 PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-111-B07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710032 ID=EY710032; Name=EY710032; organism=Citrus sinensis; type=EST; length=958bp
GATGATTTTGAGCAACAGATAGCCACACTTTGTTTTGCCCCGTTCGTTGA
CTCCAGCTGAACAATAATACAACAACAAAAACAATGGCTTGCTCAGCTGC
TTCTGCTGCTGCCACGGCAACAGCCGCTCTCATTTCCTCTAACCCCAAGG
CTTTCTCTTCTTCCTCAATCTCCCCTTCTCAAAACCTAACCATCCCCCGC
TCCTTCTCCGGCCTCCGCAATCCCCTCAAGTCCCAGGTCCCCCGCCCCGT
TTCTCTTTCCCGCGGGTCCCGTTCTCGCAAGTCCTTCGTTGTCAAAGCAT
CCGTTGAAATACCACCATTGGTGGGCAACACGGCACCTGATTTTGCTGCA
GAGGCTGTTTTCGATCAAGAGTTCATCAATGTCAAGCTTTCGGATTACAT
TGGGAAGAAATATGTGATTCTCTTTTTCTACCCGTTGGACTTCACATTTG
TTTGCCCCACAGAAATCACTGCTTTTCAGTGACCGATATGCTGAATTTGA
AAAAGCTAAACACAAAAATATTGGGTGTCTCAACTGACAGTGTGTTTTCC
ACACTTGGGCATGGGTCCAAACAAAACGAAAAGTCAGGGGGCCTGGGTGA
ATTTGAAGTACCCACTAATTTTGCTGAAATCACCCAAACCAATTTTCAAA
ATTCCAAGGGAATCCTAAACCCGGAATCGGGAAAATTGCTTTGAAAAGAA
TTCTTTATTTATTGAAAAAAAAAGGAATCCTCCAGCCCCCCAACCATTTA
AAAAACCTTGGCCATTGGGAAGGAAGGGTGAAAAAAAAACCGAAAAAAAA
CTTTCCGGGCCTGGCTAATACCGGGGAAAGGAAAAACCAAAAAAAAAAAA
TTTGGCCCCACCAGAGAAGAGAAAACCCCCGGGAGAAAAAAACACCCTAG
AAGACCACAAAACCCAAAAAACACTCAAAAAGGAGAAAAAAATTTTTTTC
CCACATAT
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