EY684237

Overview
NameEY684237
Unique NameEY684237
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length966
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684237 vs. ExPASy Swiss-Prot
Match: YOU1_CAEEL (Putative transporter ZK637.1 OS=Caenorhabditis elegans GN=ZK637.1 PE=3 SV=5)

HSP 1 Score: 85.5001 bits (210), Expect = 5.010e-16
Identity = 39/95 (41.05%), Postives = 58/95 (61.05%), Query Frame = 3
Query:  135 DHRLVYTLDEALTFMGFGKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGXXXXXXXXITTVVFAGMLVGAYSWGLISDIYGRRKVFFFIT 419
            D    +T+DEA+  +GFG+FQ      +G+ W ++AME+M+LS + PA+  EWG        +TT VF+GM++ +  WG I D +GRRK   F T
Sbjct:   62 DSEKTFTVDEAVEALGFGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGISSVQQALVTTCVFSGMMLSSTFWGKICDRFGRRKGLTFST 156          
BLAST of EY684237 vs. ExPASy Swiss-Prot
Match: SVOP_XENLA (Synaptic vesicle 2-related protein OS=Xenopus laevis GN=svop PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.843e-13
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 3
Query:  150 YTLDEALTFMGFGKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGXXXXXXXXITTVVFAGMLVGAYSWGLISDIYGRR 398
            + +++A+  +GFGKFQ      +GL W ++AME+MILS + P +  EW         +T+VVF GM+  +  WG +SD YGRR
Sbjct:   68 FMVEDAVEAIGFGKFQWKLSMLTGLAWMADAMEMMILSILAPQLHCEWRLPSWQVALLTSVVFIGMMASSSLWGNVSDQYGRR 150          
BLAST of EY684237 vs. ExPASy Swiss-Prot
Match: SVOP_PONAB (Synaptic vesicle 2-related protein OS=Pongo abelii GN=SVOP PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.508e-12
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 3
Query:  150 YTLDEALTFMGFGKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGXXXXXXXXITTVVFAGMLVGAYSWGLISDIYGRR 398
            + +++A+  +GFGKFQ      +GL W ++AME+MILS + P +  EW         +T+VVF GM+  +  WG ISD YGR+
Sbjct:   68 FMVEDAVEAIGFGKFQWKLSVLTGLAWMADAMEMMILSILAPQLHCEWRLPSWQVALLTSVVFVGMMSSSTLWGNISDQYGRK 150          
BLAST of EY684237 vs. ExPASy Swiss-Prot
Match: SVOP_HUMAN (Synaptic vesicle 2-related protein OS=Homo sapiens GN=SVOP PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.508e-12
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 3
Query:  150 YTLDEALTFMGFGKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGXXXXXXXXITTVVFAGMLVGAYSWGLISDIYGRR 398
            + +++A+  +GFGKFQ      +GL W ++AME+MILS + P +  EW         +T+VVF GM+  +  WG ISD YGR+
Sbjct:   68 FMVEDAVEAIGFGKFQWKLSVLTGLAWMADAMEMMILSILAPQLHCEWRLPSWQVALLTSVVFVGMMSSSTLWGNISDQYGRK 150          
BLAST of EY684237 vs. ExPASy Swiss-Prot
Match: SVOP_BOVIN (Synaptic vesicle 2-related protein OS=Bos taurus GN=SVOP PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.508e-12
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 3
Query:  150 YTLDEALTFMGFGKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGXXXXXXXXITTVVFAGMLVGAYSWGLISDIYGRR 398
            + +++A+  +GFGKFQ      +GL W ++AME+MILS + P +  EW         +T+VVF GM+  +  WG ISD YGR+
Sbjct:   68 FMVEDAVEAIGFGKFQWKLSVLTGLAWMADAMEMMILSILAPQLHCEWRLPSWQVALLTSVVFVGMMSSSTLWGNISDQYGRK 150          
BLAST of EY684237 vs. ExPASy Swiss-Prot
Match: SVOP_RAT (Synaptic vesicle 2-related protein OS=Rattus norvegicus GN=Svop PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.389e-12
Identity = 33/83 (39.76%), Postives = 51/83 (61.45%), Query Frame = 3
Query:  150 YTLDEALTFMGFGKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGXXXXXXXXITTVVFAGMLVGAYSWGLISDIYGRR 398
            + +++A+  +GFG+FQ      +GL W ++AME+MILS + P +  EW         +T+VVF GM+  +  WG ISD YGR+
Sbjct:   68 FMVEDAVEAIGFGRFQWKLSVLTGLAWMADAMEMMILSILAPQLHCEWRLPSWQVALLTSVVFIGMMSSSTLWGNISDQYGRK 150          
BLAST of EY684237 vs. ExPASy Swiss-Prot
Match: SVOP_MOUSE (Synaptic vesicle 2-related protein OS=Mus musculus GN=Svop PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.389e-12
Identity = 33/83 (39.76%), Postives = 51/83 (61.45%), Query Frame = 3
Query:  150 YTLDEALTFMGFGKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGXXXXXXXXITTVVFAGMLVGAYSWGLISDIYGRR 398
            + +++A+  +GFG+FQ      +GL W ++AME+MILS + P +  EW         +T+VVF GM+  +  WG ISD YGR+
Sbjct:   68 FMVEDAVEAIGFGRFQWKLSVLTGLAWMADAMEMMILSILAPQLHCEWRLPSWQVALLTSVVFIGMMSSSTLWGNISDQYGRK 150          
The following BLAST results are available for this feature:
BLAST of EY684237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
YOU1_CAEEL5.010e-1641.05Putative transporter ZK637.1 OS=Caenorhabditis ele... [more]
SVOP_XENLA8.843e-1340.96Synaptic vesicle 2-related protein OS=Xenopus laev... [more]
SVOP_PONAB1.508e-1240.96Synaptic vesicle 2-related protein OS=Pongo abelii... [more]
SVOP_HUMAN1.508e-1240.96Synaptic vesicle 2-related protein OS=Homo sapiens... [more]
SVOP_BOVIN1.508e-1240.96Synaptic vesicle 2-related protein OS=Bos taurus G... [more]
SVOP_RAT4.389e-1239.76Synaptic vesicle 2-related protein OS=Rattus norve... [more]
SVOP_MOUSE4.389e-1239.76Synaptic vesicle 2-related protein OS=Mus musculus... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-054-F09-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684237 ID=EY684237; Name=EY684237; organism=Citrus sinensis; type=EST; length=966bp
CTAATTTAGAATTTATGTTTTCCATATGATTTTCTGCTGTATAGCTTTAA
GAATTGAGCTAGGACGTGCCTGTGACTCTGTGAAGGCAATAATTTCAAAT
TAATCTGCATGATACTTGCTATTCAAAGATGGATGATCATAGACTTGTGT
ACACGCTGGATGAAGCACTTACATTCATGGGGTTTGGGAAGTTCCAAGGT
CTCGCGCTTGCTTATTCTGGGCTCGGTTGGTTTTCAGAAGCAATGGAGGT
TATGATTCTCTCCTTTGTGGGACCTGCAGTGAAGTCTGAGTGGGGATTGT
CCTCAAGTGAAGAGAGCCTTATAACAACTGTTGTTTTTGCTGGAATGTTA
GTTGGAGCATATTCATGGGGCCTTATATCCGACATATATGGAAGAAGGAA
GGTTTTCTTCTTTATTACATCCTGATATGTGCCCCAAATTGCTCCTTGAA
CCATTGTATTTTATTTTTGCATTTTCCAAGATGAGTATCCTTGGTGGAGC
TTTAGTGACTTTTGTAGCTGGGTTATTAAGTTGCTTTCTCCCCTAACTAC
CTATCATTTGTTGATTCTTCGTGGTTTGGCTGGCGCTGGCCGGGGCAGTG
GGCATGTCTTCTTCTCCTGGTTTATGGATTTTGTTCCTCCTTTCAATCGA
GGAAAAGGGAATGGGCGCCTTTTTCACTTTCTGGGACTTTGGGGTCCGGT
TTCTGAAGCTGCCCTTTGCCTTGGAATCTCCATGCCCAATATTGGACTTG
GAAGGGGGCCAACCTTGTTTTTGCCTGACAAACCCGGCATTTTTTCCGGC
TTTATTTTTAATTGTTTTTTCAGGCCCAAAAACCCCCCAAAAAATTTATA
TTTTCACAAAAGGGGGAAAAAAAAAAAGGAGGGCCAAAAAAAATTTTTCT
GGGAAAAAAAAATAAAAGCAACTATATTCCACACCAAAAAGAAAAGACCC
TCCCCCCTTTTTTGTG
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