EY709977

Overview
NameEY709977
Unique NameEY709977
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1009
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY709977 vs. ExPASy Swiss-Prot
Match: DRP3A_ARATH (Dynamin-related protein 3A OS=Arabidopsis thaliana GN=DRP3A PE=1 SV=2)

HSP 1 Score: 230.335 bits (586), Expect = 1.352e-59
Identity = 120/189 (63.49%), Postives = 145/189 (76.72%), Query Frame = 1
Query:    1 IARLLDPSLQCARFIYDELMKISHHCLVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYINTSHPNFIGGSKAVEIALQQIKSSKVPLPITRHKDGVEPDKAPSSERSLKSRAILARQVNGIMADQGVRPTVEVEKSSSRWKTQVVQVWGISSIFGGEWITRVSAGQGSVTNKPFSGA 567
            I+RLLDPSLQCARFI++EL+KISH C++NELQRFPVLRKRMDEVIG+FLREGLEPSE MIG II+MEMDYINTSHPNFIGG+KAVE A+ Q+KSS++P P+ R KD VEPD+  SS   +KSR+ L RQ NGI+ DQGV  + + EK+         + WGI SIF G     V+  + S+ NKPFS A
Sbjct:  452 ISRLLDPSLQCARFIFEELIKISHRCMMNELQRFPVLRKRMDEVIGDFLREGLEPSEAMIGDIIDMEMDYINTSHPNFIGGTKAVEAAMHQVKSSRIPHPVARPKDTVEPDRTSSSTSQVKSRSFLGRQANGIVTDQGV-VSADAEKAQPAANASDTR-WGIPSIFRGGDTRAVT--KDSLLNKPFSEA 636          
BLAST of EY709977 vs. ExPASy Swiss-Prot
Match: DRP3B_ARATH (Dynamin-related protein 3B OS=Arabidopsis thaliana GN=DRP3B PE=1 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 4.071e-56
Identity = 112/188 (59.57%), Postives = 140/188 (74.47%), Query Frame = 1
Query:    1 IARLLDPSLQCARFIYDELMKISHHCLVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYINTSHPNFIGGSKAVEIALQQIKSSKVPLPITRHKDGVEPDKAPSSERSLKSRAILARQVNGIMADQGVRPTVEVEKSSSRWKTQVVQVW-GISSIFGGEWITRVSAGQGSVTNKPFS 561
            I+RLLDPSLQCARFI+DEL+KISH C++ ELQRFPVL+KRMDEVIGNFLREGLEPS+ MI  +IEMEMDYINTSHPNFIGG+KAVE A+Q +KSS++P P+ R +D VEP++  SS   +K+R+ L RQ NGI+ DQ V    + E+ +    T     W G SSIF G      +A + ++ NKPFS
Sbjct:  437 ISRLLDPSLQCARFIFDELVKISHQCMMKELQRFPVLQKRMDEVIGNFLREGLEPSQAMIRDLIEMEMDYINTSHPNFIGGTKAVEQAMQTVKSSRIPHPVARPRDTVEPERTASSGSQIKTRSFLGRQANGIITDQAVPTAADAERPAPAGSTS----WSGFSSIFRGS--DGQAAAKNNLLNKPFS 618          
BLAST of EY709977 vs. ExPASy Swiss-Prot
Match: DNM1_YEAST (Dynamin-related protein DNM1 OS=Saccharomyces cerevisiae GN=DNM1 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.486e-15
Identity = 37/86 (43.02%), Postives = 57/86 (66.28%), Query Frame = 1
Query:    1 IARLLDPSLQCARFIYDELMKISHHCLVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYINTSHPNFIGGSKAVE 258
            I  LL+PS +C   +Y+ELMKI H C   EL R+P L+  + EVI   LRE L+P+ + +  +I++   YINT+HPNF+  ++A++
Sbjct:  456 IKLLLEPSQRCVELVYEELMKICHKCGSAELARYPKLKSMLIEVISELLRERLQPTRSYVESLIDIHRAYINTNHPNFLSATEAMD 541          
BLAST of EY709977 vs. ExPASy Swiss-Prot
Match: DYNA_DICDI (Dynamin-A OS=Dictyostelium discoideum GN=dymA PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 5.946e-15
Identity = 38/86 (44.19%), Postives = 56/86 (65.12%), Query Frame = 1
Query:    1 IARLLDPSLQCARFIYDELMKISHHCLVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYINTSHPNFIGGSKAVE 258
            + RL +PS QC  ++YDEL +I       EL RF  L+ R+ EV+ N L++   P++TMI H+I++E  +INTSHP+F+GG    E
Sbjct:  419 VVRLEEPSAQCVEYVYDELQRIVSQLEAKELSRFINLKARVIEVVNNLLQKHKVPTKTMIEHLIKIETAFINTSHPDFVGGEGIFE 504          
BLAST of EY709977 vs. ExPASy Swiss-Prot
Match: YB68_SCHPO (Dynamin-like protein C12C2.08 OS=Schizosaccharomyces pombe GN=SPBC12C2.08 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.913e-13
Identity = 43/138 (31.16%), Postives = 76/138 (55.07%), Query Frame = 1
Query:   10 LLDPSLQCARFIYDELMKISHHCLVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYINTSHPNFIGGSKAVEIALQQIKSSKVPL------PITRHKDGVEPD--KAPSSERSLKSRAILARQVNGI 399
            L  P  QC   +Y+ELMKI H+   +++  FP L+  + E + + LRE L P+ + +  +I ++  YINT+HP+F+G   A+ + L + + +++ L      PI+   D V+PD  +  SS+     ++I  +  N I
Sbjct:  454 LAAPCHQCVELVYEELMKICHYSGDSDISHFPKLQTALVETVSDLLRENLTPTYSFVESLIAIQSAYINTNHPDFLGVQGAMAVVLSRKEQNRLMLSQENDEPISSALDTVKPDGIELYSSDPDTSVKSITNKATNEI 591          
BLAST of EY709977 vs. ExPASy Swiss-Prot
Match: VPS1_SCHPO (Vacuolar protein sorting-associated protein 1 OS=Schizosaccharomyces pombe GN=vps1 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.913e-13
Identity = 40/102 (39.22%), Postives = 68/102 (66.67%), Query Frame = 1
Query:    1 IARLLDPSLQCARFIYDELMKISHHCLVNEL-QRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYINTSHPNFIGGSKAVEIALQQIKSSKVPLPI 303
            I RL DPSL+C   IYDEL++I +  L   + +R+P+L+    +V+  F R+ ++P+ T++  ++ ME  YINT HP+F+ G +A  +A+ Q ++SK P+P+
Sbjct:  431 IKRLEDPSLKCVSLIYDELVRILNQLLQRPIFKRYPLLKDEFYKVVIGFFRKCMQPTNTLVMDMVAMEGSYINTVHPDFLSGHQA--MAIVQSQNSK-PIPV 529          
BLAST of EY709977 vs. ExPASy Swiss-Prot
Match: DNM1L_HUMAN (Dynamin-1-like protein OS=Homo sapiens GN=DNM1L PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.989e-11
Identity = 48/172 (27.91%), Postives = 79/172 (45.93%), Query Frame = 1
Query:    1 IARLLDPSLQCARFIYDELMKISHHCL---VNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYINTSHPNFIGG----------------SKAVEIALQQIKSSKVPLPITRHKDGVEPDKAPSSERSLKSRAILARQVNGIMADQGVRPTVEVEKSSSRWK 459
            I RL +PSL+C   +++E+ +I  HC      EL RFP L   + EV+   LR+ L  +  M+ +++ +E+ YINT HP+F                   ++ +  A+ + KSSKVP  +       EP  A S+E   K      R+   + +  G       E ++  W+
Sbjct:  421 IKRLEEPSLRCVELVHEEMQRIIQHCSNYSTQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYINTKHPDFADACGLMNNNIEEQRRNRLARELPSAVSRDKSSKVPSALAPASQ--EPSPAASAEADGKLIQDSRRETKNVASGGGGVGDGVQEPTTGNWR 590          
BLAST of EY709977 vs. ExPASy Swiss-Prot
Match: DNM1L_BOVIN (Dynamin-1-like protein OS=Bos taurus GN=DNM1L PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.989e-11
Identity = 51/173 (29.48%), Postives = 81/173 (46.82%), Query Frame = 1
Query:    1 IARLLDPSLQCARFIYDELMKISHHCL---VNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYINTSHPNFIGG----------------SKAVEIALQQIKSSKVPLPITRHKDGVEPDKAPSSERSLKSRAILARQV-NGIMADQGVRPTVEVEKSSSRWK 459
            I RL +PSL+C   +++E+ +I  HC      EL RFP L   + EV+   LR+ L  +  M+ +++ +E+ YINT HP+F                   ++ +  A+ + KSSKVP  +       EP  A S+E   K      R+  N      GV   V+ E ++  W+
Sbjct:  434 IKRLEEPSLRCVELVHEEMQRIIQHCSNYSTQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYINTKHPDFADACGLMNNNIEEQRRNRLARELPSAVSRDKSSKVPSALAPASQ--EPSPAASAEADGKLIQESRRETKNAASGGGGVGDAVQ-EPTTGNWR 603          
The following BLAST results are available for this feature:
BLAST of EY709977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
DRP3A_ARATH1.352e-5963.49Dynamin-related protein 3A OS=Arabidopsis thaliana... [more]
DRP3B_ARATH4.071e-5659.57Dynamin-related protein 3B OS=Arabidopsis thaliana... [more]
DNM1_YEAST3.486e-1543.02Dynamin-related protein DNM1 OS=Saccharomyces cere... [more]
DYNA_DICDI5.946e-1544.19Dynamin-A OS=Dictyostelium discoideum GN=dymA PE=1... [more]
YB68_SCHPO1.913e-1331.16Dynamin-like protein C12C2.08 OS=Schizosaccharomyc... [more]
VPS1_SCHPO1.913e-1339.22Vacuolar protein sorting-associated protein 1 OS=S... [more]
DNM1L_HUMAN3.989e-1127.91Dynamin-1-like protein OS=Homo sapiens GN=DNM1L PE... [more]
DNM1L_BOVIN3.989e-1129.48Dynamin-1-like protein OS=Bos taurus GN=DNM1L PE=2... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-022-E08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY709977 ID=EY709977; Name=EY709977; organism=Citrus sinensis; type=EST; length=1009bp
ATTGCTCGCTTGTTGGATCCTAGTCTTCAGTGTGCGAGGTTCATATATGA
TGAGTTAATGAAGATTAGCCATCACTGTCTTGTGAATGAACTGCAGCGCT
TTCCTGTTCTTAGAAAGCGTATGGATGAGGTCATCGGGAACTTTCTGCGA
GAAGGCCTTGAGCCCTCCGAGACAATGATTGGACATATCATTGAAATGGA
GATGGACTATATAAACACTTCCCATCCAAATTTTATTGGTGGAAGTAAAG
CTGTGGAAATTGCACTGCAGCAGATCAAGTCTTCTAAGGTTCCTTTGCCC
ATAACCAGGCATAAGGATGGTGTGGAACCCGATAAGGCACCAAGCTCCGA
GAGAAGCTTAAAGTCTCGAGCTATTCTTGCAAGACAAGTCAATGGAATCA
TGGCTGATCAGGGAGTTCGTCCTACAGTGGAAGTTGAAAAAAGTAGCTCC
CGCTGGAAAACACAAGTGGTTCAAGTTTGGGGGATTTCATCAATTTTTGG
GGGGGAGTGGATAACCCGTGTGTCTGCTGGCCAGGGAAGCGTAACAAACA
AGCCATTTAGTGGAGCCTGGCCAGAACATGAAACATGGTTTTGCTTTGAT
CCATTTTGAAAAAGCCCCTCAACCATCCTTGAGGGCCCTCGAAAAGCCAT
TTCAAAAACGGGAAAATGGTGAAATCCCAGTGGACAAAATTTGCTTGTGA
AAATCTATACTATGAATTTTGTTCCGAAAAAAATATCCAAGGAACCAAAA
ACCCAAAGGCCATTTTTGTGATTTTCCCCGGGGGAAAATCCTAACAAAAA
AGGGGGGCCCCGTCAATAAGGGGTTTCTTTTTAAAAAAAACCTTTTAACA
AAAAAAAAAAACCTTGGTTTTAAAAAAAAAAATCCTTCTCGGGGGCCCCC
GAAAGGGGGGGGGGTAAAAACAAAAAAAAAAAAAAAAAAAGGCCCATCTA
CACATGAAAACACCCACCCCTCCCCGGAGATTTTTTTTTCCCTCCACCGC
GACTTTTTT
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