EY683369

Overview
NameEY683369
Unique NameEY683369
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY683369 vs. ExPASy Swiss-Prot
Match: MENE_GEOSW (2-succinylbenzoate--CoA ligase OS=Geobacillus sp. (strain WCH70) GN=menE PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.557e-20
Identity = 47/101 (46.53%), Postives = 66/101 (65.35%), Query Frame = 2
Query:    5 DRLKDVIISGGENISSVEVETVLFSHPAVLEASVVARPDDHWGQTPCAFVKLKEGYSADAQEIIKFCRDHLPHYMAPKTVIF-EDLPKTSTGKVQKFILRK 304
            DR  D+IISGGEN+   E+E VL SH AV EA V    D+ WGQ PCAFVK K GYS   +++ +FC+ HL  Y  PK + F ++LP+ ++ K+ +  L++
Sbjct:  382 DRRSDLIISGGENVYPAEIEAVLLSHEAVEEAGVTGIDDETWGQVPCAFVKRKRGYSVTVEQLKQFCQAHLAKYKIPKQIYFVDELPRNASQKLLRHQLKQ 482          
BLAST of EY683369 vs. ExPASy Swiss-Prot
Match: ACSF2_DANRE (Acyl-CoA synthetase family member 2, mitochondrial OS=Danio rerio GN=acsf2 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.923e-20
Identity = 46/103 (44.66%), Postives = 66/103 (64.08%), Query Frame = 2
Query:    8 RLKDVIISGGENISSVEVETVLFSHPAVLEASVVARPDDHWGQTPCAFVKLKEGYSADAQEIIKFCRDHLPHYMAPKTVIF-EDLPKTSTGKVQKFILRKKAE 313
            R+KD+II GGENI   E+E  L +HP +LEA VV   D+  G+  CA ++LKEG     +EI  +C+  + HY  P+ ++F +D P T TGK+QK  LR++ E
Sbjct:  499 RIKDLIIRGGENIYPAEIEQFLHTHPKILEAQVVGVKDERMGEEVCACIRLKEGQECTVEEIKAYCKGKIAHYKVPRYILFVQDYPLTITGKIQKHKLRERTE 601          
BLAST of EY683369 vs. ExPASy Swiss-Prot
Match: YNGI_BACSU (Putative acyl-CoA synthetase yngI OS=Bacillus subtilis GN=yngI PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.136e-19
Identity = 47/109 (43.12%), Postives = 71/109 (65.14%), Query Frame = 2
Query:    8 RLKDVIISGGENISSVEVETVLFSHPAVLEASVVARPDDHWGQTPCAFVKLKEGYSADAQEIIKFCRDHLPHYMAPKTVIF-EDLPKTSTGKVQKFILRKKAEALGSLS 331
            RLKD++I GGENI   E+E  L+ HPAVL+  VV  PD  +G+   A++KLK+G S    E+  +C+  +  +  P+ VIF +D P T++GK+QK+ LR+K   + +LS
Sbjct:  438 RLKDMLIRGGENIYPREIEEFLYQHPAVLDVQVVGVPDAKFGEEAAAWIKLKDGKSVSPDELKAYCKGKIARHKIPRYVIFTDDYPMTASGKIQKYKLREKTIEMFNLS 546          
BLAST of EY683369 vs. ExPASy Swiss-Prot
Match: MENE_BACWK (2-succinylbenzoate--CoA ligase OS=Bacillus weihenstephanensis (strain KBAB4) GN=menE PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.494e-18
Identity = 51/106 (48.11%), Postives = 67/106 (63.21%), Query Frame = 2
Query:    5 DRLKDVIISGGENISSVEVETVLFSHPAVLEASVVARPDDHWGQTPCAFVKLKEGYSADAQEIIKFCRDHLPHYMAPKTVIF-EDLPKTSTGKVQKFILRKKAEAL 319
            DR  D+IISGGENI   ++E VL SHPAV+EA VV   D+ WGQ P AFV +K G     +EII+FC + L  Y  PK   F E+LP+ ++ K+ +  LRK  E +
Sbjct:  378 DRRSDLIISGGENIYPAQIEEVLLSHPAVVEAGVVGMADESWGQVPAAFV-VKSG-DVTEEEIIRFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELRKLVEEM 481          
BLAST of EY683369 vs. ExPASy Swiss-Prot
Match: MENE_BACC7 (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain AH187) GN=menE PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.678e-18
Identity = 51/106 (48.11%), Postives = 65/106 (61.32%), Query Frame = 2
Query:    5 DRLKDVIISGGENISSVEVETVLFSHPAVLEASVVARPDDHWGQTPCAFVKLKEGYSADAQEIIKFCRDHLPHYMAPKTVIF-EDLPKTSTGKVQKFILRKKAEAL 319
            DR  D+IISGGENI   ++E VL SHPAV EA VV   DD WGQ P AFV +K G     +EII FC + L  Y  PK   F E+LP+ ++ K+ +  LR+  E +
Sbjct:  378 DRRSDLIISGGENIYPAQIEEVLLSHPAVAEAGVVGMTDDKWGQVPAAFV-VKSG-EVTEEEIIHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELRQLVEEM 481          
BLAST of EY683369 vs. ExPASy Swiss-Prot
Match: MENE_BACCR (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=menE PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.416e-18
Identity = 50/106 (47.17%), Postives = 66/106 (62.26%), Query Frame = 2
Query:    5 DRLKDVIISGGENISSVEVETVLFSHPAVLEASVVARPDDHWGQTPCAFVKLKEGYSADAQEIIKFCRDHLPHYMAPKTVIF-EDLPKTSTGKVQKFILRKKAEAL 319
            DR  D+IISGGENI   ++E VL SHPAV EA VV   DD WGQ P AFV +K G +   +EI+ FC + L  Y  PK   F E+LP+ ++ K+ +  LR+  E +
Sbjct:  379 DRRSDLIISGGENIYPAQIEEVLLSHPAVAEAGVVGMSDDKWGQVPAAFV-VKSG-AVTEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELRQLVEEM 482          
BLAST of EY683369 vs. ExPASy Swiss-Prot
Match: MENE_BACCQ (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain Q1) GN=menE PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.686e-18
Identity = 50/106 (47.17%), Postives = 65/106 (61.32%), Query Frame = 2
Query:    5 DRLKDVIISGGENISSVEVETVLFSHPAVLEASVVARPDDHWGQTPCAFVKLKEGYSADAQEIIKFCRDHLPHYMAPKTVIF-EDLPKTSTGKVQKFILRKKAEAL 319
            DR  D+IISGGENI   ++E VL SHPAV EA VV   DD WGQ P AFV +K G     +EI+ FC + L  Y  PK   F E+LP+ ++ K+ +  LR+  E +
Sbjct:  378 DRRSDLIISGGENIYPAQIEEVLLSHPAVAEAGVVGMTDDKWGQVPAAFV-VKSG-EVTEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELRQLVEEM 481          
BLAST of EY683369 vs. ExPASy Swiss-Prot
Match: MENE_BACC1 (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain ATCC 10987) GN=menE PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.158e-17
Identity = 51/106 (48.11%), Postives = 64/106 (60.38%), Query Frame = 2
Query:    5 DRLKDVIISGGENISSVEVETVLFSHPAVLEASVVARPDDHWGQTPCAFVKLKEGYSADAQEIIKFCRDHLPHYMAPKTVIF-EDLPKTSTGKVQKFILRKKAEAL 319
            DR  D+IISGGENI   ++E VL SHPAV EA VV   DD WGQ P AFV +K G     +EII FC   L  Y  PK   F E+LP+ ++ K+ +  LR+  E +
Sbjct:  378 DRRSDLIISGGENIYPAQIEEVLLSHPAVAEAGVVGMTDDKWGQVPVAFV-VKSG-EVTEEEIIHFCEAKLAKYKVPKKACFLEELPRNASKKLLRRELRQLVEEM 481          
BLAST of EY683369 vs. ExPASy Swiss-Prot
Match: ACSF2_MOUSE (Acyl-CoA synthetase family member 2, mitochondrial OS=Mus musculus GN=Acsf2 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.158e-17
Identity = 45/103 (43.69%), Postives = 63/103 (61.17%), Query Frame = 2
Query:    8 RLKDVIISGGENISSVEVETVLFSHPAVLEASVVARPDDHWGQTPCAFVKLKEGYSADAQEIIKFCRDHLPHYMAPKTVIF-EDLPKTSTGKVQKFILRKKAE 313
            R KD+II GGENI   E+E     HP V EA VV   D+  G+  CA ++LK G +  A+EI  FC+  + H+  P+ ++F E  P T +GK+QKF LR++ E
Sbjct:  508 RSKDMIIRGGENIYPAELEDFFLKHPQVQEAQVVGVKDERMGEEICACIRLKSGETTTAEEIKAFCKGKISHFKIPRYIVFVEGYPLTISGKIQKFKLREQME 610          
BLAST of EY683369 vs. ExPASy Swiss-Prot
Match: ACSF2_BOVIN (Acyl-CoA synthetase family member 2, mitochondrial OS=Bos taurus GN=ACSF2 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.158e-17
Identity = 45/103 (43.69%), Postives = 63/103 (61.17%), Query Frame = 2
Query:    8 RLKDVIISGGENISSVEVETVLFSHPAVLEASVVARPDDHWGQTPCAFVKLKEGYSADAQEIIKFCRDHLPHYMAPKTVIF-EDLPKTSTGKVQKFILRKKAE 313
            R KD+II GGENI   E+E    +HP V E  VV   DD  G+  CA ++LKEG    A+EI  FC+  + H+  P+ ++F  + P T +GK+QKF LR++ E
Sbjct:  508 RSKDMIIRGGENIYPAELEDFFHTHPQVQEVQVVGVKDDRMGEEICACIRLKEGEKTTAEEIKAFCKGKISHFKIPRYIVFVTNYPLTVSGKIQKFKLREQME 610          
The following BLAST results are available for this feature:
BLAST of EY683369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
MENE_GEOSW3.557e-2046.532-succinylbenzoate--CoA ligase OS=Geobacillus sp. ... [more]
ACSF2_DANRE7.923e-2044.66Acyl-CoA synthetase family member 2, mitochondrial... [more]
YNGI_BACSU5.136e-1943.12Putative acyl-CoA synthetase yngI OS=Bacillus subt... [more]
MENE_BACWK1.494e-1848.112-succinylbenzoate--CoA ligase OS=Bacillus weihens... [more]
MENE_BACC75.678e-1848.112-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACCR7.416e-1847.172-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACCQ9.686e-1847.172-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACC12.158e-1748.112-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
ACSF2_MOUSE2.158e-1743.69Acyl-CoA synthetase family member 2, mitochondrial... [more]
ACSF2_BOVIN2.158e-1743.69Acyl-CoA synthetase family member 2, mitochondrial... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-650-049-D06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY683369 ID=EY683369; Name=EY683369; organism=Citrus sinensis; type=EST; length=846bp
AAAGGATCGATTGAAGGATGTAATAATTTCTGGTGGAGAGAATATAAGCT
CCGTAGAGGTAGAAACAGTATTGTTCAGTCATCCAGCAGTTCTCGAAGCT
TCTGTTGTTGCAAGGCCAGATGATCACTGGGGACAGACACCTTGTGCATT
TGTTAAGTTAAAAGAAGGATATAGTGCTGATGCTCAAGAAATAATCAAGT
TTTGCCGGGATCACTTGCCACATTATATGGCTCCTAAGACAGTCATTTTT
GAAGACTTGCCCAAAACTTCAACAGGAAAAGTGCAAAAGTTCATACTGAG
GAAGAAAGCAGAGGCCCTGGGCAGCCTTTCTTAATCCTAAAACAAATGTA
AAGTCATGTTTCCAAATAAAATGTCACTTTCATCACATGGTCATTGATTA
TTACAATCTTCGCAAGCTGGAGAGCCATAATAAATGTCAATTGTACATGG
CATTTGCTTTAATGTCAAAATTGTCATCATTGTATAGCAGAATCCAGCAC
TTTTATGATCCNNAAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAACACAAAAAAAAAGAAAAAAAAAAGAAACAAAAAAACAAAAAAA
AAAAGGGGGGGGCCCCTCTAAAGAATCAACGTTAACTTACCCGGGCTGGG
CAACTAAATATCCTTTCAAAGGGGCCCCCAAAATTAATTTCGGGGGCCGC
CCTTTTTAACCCCCCGGGGGGGGAAAAACCCCGGGGTTTTCCCAATTTAA
TCCCCCTTTGGCCCAACCCCCCTTTCCCCCGGGGGGGGAAAAAAAAAAAA
AGGCCCCCCCCCCAATCCCCCCTCCCACAAATTTGCCCCCCCCCGG
back to top