EY709054

Overview
NameEY709054
Unique NameEY709054
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1694 contig Csv1_Contig1694:589..1424. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY709054 vs. ExPASy Swiss-Prot
Match: LPP2_ARATH (Lipid phosphate phosphatase 2 OS=Arabidopsis thaliana GN=LPP2 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.394e-39
Identity = 74/101 (73.27%), Postives = 82/101 (81.19%), Query Frame = 2
Query:    5 ASAWFSFIVLVRKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFCYLQFFPPPYDTNGWGPHAYIHMLANSPNDQQSN 307
            A   F  + L  KIRVFD+RGHVAKLCIV LP L+AAL+GVSRVDDYWHHWQDVFGGAIIG  V+ FCYLQFFPPPYD +GWGPHAY  MLA+S ND Q +
Sbjct:  173 AGLGFLSLYLSGKIRVFDQRGHVAKLCIVILPLLVAALVGVSRVDDYWHHWQDVFGGAIIGLTVATFCYLQFFPPPYDPDGWGPHAYFQMLADSRNDVQDS 273          
BLAST of EY709054 vs. ExPASy Swiss-Prot
Match: LPP3_ARATH (Putative lipid phosphate phosphatase 3, chloroplastic OS=Arabidopsis thaliana GN=LPP3 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.402e-31
Identity = 59/99 (59.60%), Postives = 71/99 (71.72%), Query Frame = 2
Query:   17 FSFIVLVRKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFCYLQFFPPPYDTNGWGPHAYIHMLANSPNDQQSNNA 313
            F  + L  KI+ FD +GHVAKLCIV LP L AAL+G+SRVDDYWHHWQDVF G ++G  +S  CYLQFFPPPY T GWGP+AY  +L  +     +N A
Sbjct:  226 FLSLYLSGKIQAFDGKGHVAKLCIVILPLLFAALVGISRVDDYWHHWQDVFAGGLLGLAISTICYLQFFPPPYHTEGWGPYAYFQVLEAARVQGAANGA 324          
BLAST of EY709054 vs. ExPASy Swiss-Prot
Match: LPP1_ARATH (Lipid phosphate phosphatase 1 OS=Arabidopsis thaliana GN=LPP1 PE=2 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 2.695e-28
Identity = 53/87 (60.92%), Postives = 64/87 (73.56%), Query Frame = 2
Query:    5 ASAWFSFIVLVRKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFCYLQFFPPPYDTNGWGPHAY 265
            A   F  + L  KI+ F+  GHVAKLC+V  P L A L+G+SRVDDYWHHWQDVF GA+IGT+V+ FCY QF+P PY   GWGP+AY
Sbjct:  197 AGLTFLSLYLSGKIKAFNNEGHVAKLCLVIFPLLAACLVGISRVDDYWHHWQDVFAGALIGTLVAAFCYRQFYPNPYHEEGWGPYAY 283          
BLAST of EY709054 vs. ExPASy Swiss-Prot
Match: PPC1B_XENLA (Phosphatidate phosphatase PPAPDC1B OS=Xenopus laevis GN=ppapdc1b PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.910e-11
Identity = 34/76 (44.74%), Postives = 43/76 (56.58%), Query Frame = 2
Query:    5 ASAWFSFIVLVRKIRVFDR--RGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFCYLQFFP 226
            A   F+ + L  K+R F    RGH  +LC   +P L A  I +SR  DY HHWQDV  GA IG   +F CY Q++P
Sbjct:  117 AGLGFTALYLAGKLRCFSPCGRGHSWRLCASLIPLLCAIAIALSRTCDYKHHWQDVVVGAFIGLFFAFLCYRQYYP 192          
BLAST of EY709054 vs. ExPASy Swiss-Prot
Match: PPC1B_MOUSE (Phosphatidate phosphatase PPAPDC1B OS=Mus musculus GN=Ppapdc1b PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.910e-11
Identity = 36/103 (34.95%), Postives = 53/103 (51.46%), Query Frame = 2
Query:   17 FSFIVLVRKIRVF--DRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFCYLQFFPPPYDTNGWGPHAYIHMLANSPNDQQSNNAQL 319
            F+   L  K+  F    RG   +LC    P L AA+I +SR  DY HHWQDV  G++IG   ++ CY Q++PP  D     P    H L +S    + ++ ++
Sbjct:  158 FASFYLAGKLHCFTPQGRGKSWRLCAFLSPLLFAAVIALSRTCDYKHHWQDVLVGSMIGMTFAYVCYRQYYPPLTDVECHKPFQDKHKLPSSQKPSELHHLEI 260          
BLAST of EY709054 vs. ExPASy Swiss-Prot
Match: PPC1A_HUMAN (Phosphatidate phosphatase PPAPDC1A OS=Homo sapiens GN=PPAPDC1A PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.711e-11
Identity = 34/97 (35.05%), Postives = 52/97 (53.61%), Query Frame = 2
Query:   17 FSFIVLVRKIRVFDR--RGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFCYLQFFPPPYDTNGWGPHAYIHMLANSPNDQQ 301
            F+   L  K+  F    RG   +LC   LP   A +I +SR+ DY HHWQD F G +IG I ++ CY Q +PP  +T    P+  + + A+   +++
Sbjct:  156 FTTFYLAGKLHCFTESGRGKSWRLCAAILPLYCAMMIALSRMCDYKHHWQDSFVGGVIGLIFAYICYRQHYPPLANTACHKPYVSLRVPASLKKEER 252          
The following BLAST results are available for this feature:
BLAST of EY709054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
LPP2_ARATH3.394e-3973.27Lipid phosphate phosphatase 2 OS=Arabidopsis thali... [more]
LPP3_ARATH3.402e-3159.60Putative lipid phosphate phosphatase 3, chloroplas... [more]
LPP1_ARATH2.695e-2860.92Lipid phosphate phosphatase 1 OS=Arabidopsis thali... [more]
PPC1B_XENLA3.910e-1144.74Phosphatidate phosphatase PPAPDC1B OS=Xenopus laev... [more]
PPC1B_MOUSE3.910e-1134.95Phosphatidate phosphatase PPAPDC1B OS=Mus musculus... [more]
PPC1A_HUMAN8.711e-1135.05Phosphatidate phosphatase PPAPDC1A OS=Homo sapiens... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-105-G01-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY709054 ID=EY709054; Name=EY709054; organism=Citrus sinensis; type=EST; length=835bp
CCACGCGTCCGCTTGGTTTTCTTTCATTGTACTTGTCAGGAAAATCAGGG
TATTTGATCGTAGAGGCCATGTTGCAAAGCTCTGTATTGTTTTCCTACCA
TTTCTTCTAGCTGCTCTGATAGGAGTTTCTCGAGTTGATGACTATTGGCA
TCATTGGCAAGATGTCTTTGGTGGAGCTATCATAGGGACAATTGTTTCTT
TCTTTTGTTACTTGCAATTCTTTCCACCTCCATATGATACAAATGGCTGG
GGGCCTCATGCATATATTCATATGCTGGCAAATTCTCCAAATGACCAGCA
ATCTAACAACGCCCAATTGTCTCAAAGTACAACTATCATAGACCTAAAAT
GGTTAATCCGAAACCTCAACGTATATTGAAGAATAAGATCCAATAACTCG
TGGAGTGTAATGTGATGCGCGAGGAGAGTGAAAAACAAGAAGAGACCTTG
CCTCCCCTGCCGGCTGCGCGAGAAGGGAGAACAATTAAGAAAAAGTCCAG
GAGGCGCCAGGAATAGATGAGAAAACAGACAACCGCTATAGCGGTCCGCG
GGGCCGAGGATATGCCTCGAGACATGATCTTCCACCCCTCCCGAACGAGA
GACAGGCACACGTGAACGAAATGTGTCAGTGAAAGTGTGGGTGGGGAGGA
TACTGTCGTTTGTATAAAGAAGAGTATTGACTTAACGAACCACACCGCTG
CGTATGGCCGCGGGCGCCGTAGGCCCAGCGGCCTAAGGTGCCGGGGAGGG
GGGGATGGGGCTGCTGGAGAGGAGCGTAGGTGGGAGAGGGTTGATGTGCA
GTGGGAGGAGGAGGCGGATGGGGGGGAGAGACGGC
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