FC922559
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC922559 vs. ExPASy Swiss-Prot
Match: IMB1_MOUSE (Importin subunit beta-1 OS=Mus musculus GN=Kpnb1 PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 7.083e-33 Identity = 81/198 (40.91%), Postives = 108/198 (54.55%), Query Frame = 2 Query: 2 DICRALEEKILPYCDGIMTQLLKDLSSNQLHRSVKPPIFSCFGDIALAIGENFEKYLMYAMPMLQSAADLSAHTANVDDDMTEYTNSLRNGILEAYSGIFQGFKNS-----PKTQLLIPYAPHILQFLDSMYMEKDMDELVMKTAIGLLGDLADTLGSNAGSLIQQSLTSKDFLNECLSSKDHMIKESAEWARLAINK 580 D+CRAL+ ILP+CD +M LL++L + +HRSVKP I S FGDIALAIG F+KYL + LQ A+ A D DM +Y N LR LEAY+GI QG K P L+ P IL F+D + ++D + V+ A GL+GDL G + L++ + L E SK + K A WA + K Sbjct: 676 DLCRALQSNILPFCDEVMQLLLENLGNENVHRSVKPQILSVFGDIALAIGGEFKKYLEVVLNTLQQAS--QAQVDKSDFDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDVMLVQPRVEFILSFIDHIAGDEDHTDGVVACAAGLIGDLCTAFGKDVLKLVEARPMIHELLTEGRRSKTNKAKTLATWATKELRK 871
BLAST of FC922559 vs. ExPASy Swiss-Prot
Match: IMB1_HUMAN (Importin subunit beta-1 OS=Homo sapiens GN=KPNB1 PE=1 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 1.208e-32 Identity = 80/198 (40.40%), Postives = 108/198 (54.55%), Query Frame = 2 Query: 2 DICRALEEKILPYCDGIMTQLLKDLSSNQLHRSVKPPIFSCFGDIALAIGENFEKYLMYAMPMLQSAADLSAHTANVDDDMTEYTNSLRNGILEAYSGIFQGFKNS-----PKTQLLIPYAPHILQFLDSMYMEKDMDELVMKTAIGLLGDLADTLGSNAGSLIQQSLTSKDFLNECLSSKDHMIKESAEWARLAINK 580 D+CRAL+ I+P+CD +M LL++L + +HRSVKP I S FGDIALAIG F+KYL + LQ A+ A D DM +Y N LR LEAY+GI QG K P L+ P IL F+D + ++D + V+ A GL+GDL G + L++ + L E SK + K A WA + K Sbjct: 676 DLCRALQSNIIPFCDEVMQLLLENLGNENVHRSVKPQILSVFGDIALAIGGEFKKYLEVVLNTLQQAS--QAQVDKSDYDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDVMLVQPRVEFILSFIDHIAGDEDHTDGVVACAAGLIGDLCTAFGKDVLKLVEARPMIHELLTEGRRSKTNKAKTLATWATKELRK 871
BLAST of FC922559 vs. ExPASy Swiss-Prot
Match: IMB1_RAT (Importin subunit beta-1 OS=Rattus norvegicus GN=Kpnb1 PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.061e-32 Identity = 80/198 (40.40%), Postives = 107/198 (54.04%), Query Frame = 2 Query: 2 DICRALEEKILPYCDGIMTQLLKDLSSNQLHRSVKPPIFSCFGDIALAIGENFEKYLMYAMPMLQSAADLSAHTANVDDDMTEYTNSLRNGILEAYSGIFQGFKNS-----PKTQLLIPYAPHILQFLDSMYMEKDMDELVMKTAIGLLGDLADTLGSNAGSLIQQSLTSKDFLNECLSSKDHMIKESAEWARLAINK 580 D+CRAL+ ILP+CD +M LL++L + +HRSVKP I S FGDI LAIG F+KYL + LQ A+ A D DM +Y N LR LEAY+GI QG K P L+ P IL F+D + ++D + V+ A GL+GDL G + L++ + L E SK + K A WA + K Sbjct: 675 DLCRALQSNILPFCDEVMQLLLENLGNENVHRSVKPQILSVFGDITLAIGGEFKKYLEVVLNTLQQAS--QAQVDKSDFDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDVMLVQPRVEFILSFIDHIAGDEDHTDGVVACAAGLIGDLCTAFGKDVLKLVEARPMIHELLTEGRRSKTNKAKTLATWATKELRK 870
BLAST of FC922559 vs. ExPASy Swiss-Prot
Match: IMB_DROME (Importin subunit beta OS=Drosophila melanogaster GN=Fs(2)Ket PE=1 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 6.205e-29 Identity = 75/198 (37.88%), Postives = 111/198 (56.06%), Query Frame = 2 Query: 2 DICRALEEKILPYCDGIMTQLLKDLSSNQLHRSVKPPIFSCFGDIALAIGENFEKYLMYAMPMLQSAADLSAHTANVDDDMTEYTNSLRNGILEAYSGIFQGFKNSPKT-----QLLIPYAPHILQFLDSMYMEKDMDELVMKTAIGLLGDLADTLGSNAGSLIQQSLTSKDFLNECLSSKDHMIKESAEWARLAINK 580 DI RAL++ ++PY + IMT L+ +L+ +HR+VKP + S FGDIAL+IG +F YL + ML+ A++L N DM EY N LR ILEAY+GI QG K +T + P+ HI+ F+ + E D+ + ++ +A G +GDL + G L+ ++ ++ FL E SK K WA I K Sbjct: 682 DIFRALKDLMVPYSNEIMTVLINNLTEPTIHRTVKPQVLSAFGDIALSIGNHFLPYLSMVLDMLRVASNLQTDANNF--DMNEYINELRESILEAYTGIIQGLKGVDQTAHTDVMHMEPHLMHIISFIKRIAQEGDVSDSMLASAAGFIGDLCTSFGPRLYPLLDDAIITQ-FLAEGKRSKAQRTKMLCTWAVKEIKK 876
BLAST of FC922559 vs. ExPASy Swiss-Prot
Match: IMB1_SCHPO (Importin subunit beta-1 OS=Schizosaccharomyces pombe GN=kap95 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.058e-28 Identity = 76/192 (39.58%), Postives = 110/192 (57.29%), Query Frame = 2 Query: 2 DICRALEEKILPYCDGIMTQLLKDLSSNQLHRSVKPPIFSCFGDIALAIGENFEKYLMYAMPMLQSAADLSAHTANVDDDMTEYTNSLRNGILEAYSGIFQGFKNSPKTQLLIPYAPHILQFLDSMYMEKDMDELVMKTAIGLLGDLADTLGSNAGSLIQQSLTSKDFLNECLSS-----KDHMIKESAEWA 562 D+ RAL KILPYCD MT+L++DL S+ L R+VKP I SCF DIALAIG F+ YL M +LQ A+ + A + M +Y ++LR GI+EAY GI Q + + L+ PY + L+ + + + E + + A+GLLGDLA++ G L +S + D++ L+S K+ A WA Sbjct: 667 DLARALNAKILPYCDDFMTRLVQDLQSSVLDRNVKPAILSCFSDIALAIGAAFQTYLEAVMVLLQQASSVQA-PPGANFSMIDYVDALRLGIVEAYVGITQAVRTDNRLDLIQPYVHSMFTLLNMITADPECSESLTRAALGLLGDLAESFPK--GEL--KSYFAADWVAALLNSGKTKISSQQTKDLARWA 853
BLAST of FC922559 vs. ExPASy Swiss-Prot
Match: IMB1_YEAST (Importin subunit beta-1 OS=Saccharomyces cerevisiae GN=KAP95 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.639e-14 Identity = 54/201 (26.87%), Postives = 92/201 (45.77%), Query Frame = 2 Query: 2 DICRALEEKILPYCDGIMTQLLKDLSSNQLHRSVKPPIFSCFGDIALAIGENFEKYLMYAMPMLQSAADLSAHTANVDDDMTEYTNSLRNGILEAYSGIFQGFKNSPKTQLLIPYAPHILQFLDSMYMEKDM--DELVMKTAIGLLGDLADTLGSNAGSLIQQSLTSKDFLNECLSSK--DHMIKESAEWARLAINKAISV 592 DI +LEE Y D +M L + +S+ R +KP + S FGDIA IG +F YL M + +A + + + +Y + +L+AY GI G + P + L PY I QF+ + + + ++ + A+GL+GD+A + D++ S + K++A WAR + +S+ Sbjct: 665 DISNSLEEDFRRYSDAMMNVLAQMISNPNARRELKPAVLSVFGDIASNIGADFIPYLNDIMALCVAAQNTKPENGTL--EALDYQIKVLEAVLDAYVGIVAGLHDKP--EALFPYVGTIFQFIAQVAEDPQLYSEDATSRAAVGLIGDIAAMFPDGSIKQFYGQDWVIDYIKRTRSGQLFSQATKDTARWAREQQKRQLSL 861 The following BLAST results are available for this feature:
BLAST of FC922559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC922559 ID=FC922559; Name=FC922559; organism=Citrus sinensis; type=EST; length=771bpback to top |