FC922557

Overview
NameFC922557
Unique NameFC922557
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC922557 vs. ExPASy Swiss-Prot
Match: PLSB_CUCSA (Glycerol-3-phosphate acyltransferase, chloroplastic OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 3.422e-89
Identity = 153/199 (76.88%), Postives = 175/199 (87.94%), Query Frame = 1
Query:    1 RVITDPLCKPFSMGRNLICVYSKKHMLDVPELIEMKRKSNTRSLKEMALLLRGGSQIIWIAPSGGRDRPDPVTGEWYPAPFDTSSIDNMRRLAEHSGIPGHIYPLALLCHDIMPPPPQVEREVGEKRVISFHGAGLSVAPEISFPDIITASKNPEEAKEVYTQAFYNSVTEQYNVLKSAIHGQQGLKASIPSVSLSQPW 597
            RVI DPLCKPFS+GRNLICVYSKKHMLD+PEL E KRK+NTRSLKEMALLLRGGSQ+IWIAPSGGRDRPDP TGEWYPAPFD SS+DNMRRL +HSG PGH+YPLALLC+DIMPPP QVE E+GEKRVISF+G GLSV PEISF +I  +  NP+E +E Y++A Y+SV +QYNVLK+AI G+Q L+AS+  VSLSQPW
Sbjct:  271 RVIADPLCKPFSIGRNLICVYSKKHMLDIPELAETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYPAPFDASSVDNMRRLLQHSGAPGHLYPLALLCYDIMPPPSQVEIEIGEKRVISFNGTGLSVGPEISFDEIAASRDNPDEVREAYSKALYDSVAKQYNVLKAAIDGKQELEASVADVSLSQPW 469          
BLAST of FC922557 vs. ExPASy Swiss-Prot
Match: PLSB_CUCMO (Glycerol-3-phosphate acyltransferase, chloroplastic OS=Cucurbita moschata PE=1 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 3.422e-89
Identity = 153/199 (76.88%), Postives = 174/199 (87.44%), Query Frame = 1
Query:    1 RVITDPLCKPFSMGRNLICVYSKKHMLDVPELIEMKRKSNTRSLKEMALLLRGGSQIIWIAPSGGRDRPDPVTGEWYPAPFDTSSIDNMRRLAEHSGIPGHIYPLALLCHDIMPPPPQVEREVGEKRVISFHGAGLSVAPEISFPDIITASKNPEEAKEVYTQAFYNSVTEQYNVLKSAIHGQQGLKASIPSVSLSQPW 597
            RV+ DPLCKPFS+GRNLICVYSKKHM D+PEL E KRK+NTRSLKEMALLLRGGSQ+IWIAPSGGRDRPDP TGEWYPAPFD SS+DNMRRL +HS +PGH++PLALLCHDIMPPP QVE E+GEKRVI+F+GAGLSVAPEISF +I    KNPEE +E Y++A ++SV  QYNVLK+AI G+QGL AS   VSLSQPW
Sbjct:  198 RVLADPLCKPFSIGRNLICVYSKKHMFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYPAPFDASSVDNMRRLIQHSDVPGHLFPLALLCHDIMPPPSQVEIEIGEKRVIAFNGAGLSVAPEISFEEIAATHKNPEEVREAYSKALFDSVAMQYNVLKTAISGKQGLGASTADVSLSQPW 396          
BLAST of FC922557 vs. ExPASy Swiss-Prot
Match: PLSB_PEA (Glycerol-3-phosphate acyltransferase, chloroplastic OS=Pisum sativum GN=GPAT PE=1 SV=1)

HSP 1 Score: 323.553 bits (828), Expect = 8.430e-88
Identity = 151/199 (75.88%), Postives = 177/199 (88.94%), Query Frame = 1
Query:    1 RVITDPLCKPFSMGRNLICVYSKKHMLDVPELIEMKRKSNTRSLKEMALLLRGGSQIIWIAPSGGRDRPDPVTGEWYPAPFDTSSIDNMRRLAEHSGIPGHIYPLALLCHDIMPPPPQVEREVGEKRVISFHGAGLSVAPEISFPDIITASKNPEEAKEVYTQAFYNSVTEQYNVLKSAIHGQQGLKASIPSVSLSQPW 597
            RVIT PLCKPFS+GRNLICVYSKKHMLD PEL++MKRK+NTRS KEMA+LLR GSQIIWIAPSGGRDRP   +GEW PAPFD+SS+DNMRRL +HSG PGHIYPLA+LCHDIMPPP +VE+E+GEKR+IS+HG G+S APEISF +   A +NPE+AK+ YT+A Y+SVTEQY+VLKSAIHG++GL+AS P VSLSQPW
Sbjct:  258 RVITVPLCKPFSIGRNLICVYSKKHMLDNPELVDMKRKANTRSRKEMAMLLRSGSQIIWIAPSGGRDRPVANSGEWAPAPFDSSSVDNMRRLVDHSGPPGHIYPLAILCHDIMPPPLKVEKEIGEKRIISYHGTGISTAPEISFSNTTAACENPEKAKDAYTKALYDSVTEQYDVLKSAIHGKKGLQASTPVVSLSQPW 456          
BLAST of FC922557 vs. ExPASy Swiss-Prot
Match: PLSB_SPIOL (Glycerol-3-phosphate acyltransferase, chloroplastic OS=Spinacia oleracea GN=GAT PE=1 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 1.438e-87
Identity = 149/199 (74.87%), Postives = 173/199 (86.93%), Query Frame = 1
Query:    1 RVITDPLCKPFSMGRNLICVYSKKHMLDVPELIEMKRKSNTRSLKEMALLLRGGSQIIWIAPSGGRDRPDPVTGEWYPAPFDTSSIDNMRRLAEHSGIPGHIYPLALLCHDIMPPPPQVEREVGEKRVISFHGAGLSVAPEISFPDIITASKNPEEAKEVYTQAFYNSVTEQYNVLKSAIHGQQGLKASIPSVSLSQPW 597
            RVITDPLCKPFSMGRNL+CVYSKKHM D PEL+++K+++NTRSLKE+ LLLRGGS+IIWIAPSGGRDRPD VTGEWYP  FD +++DNMRRL EH+G PGHIYPLALLC+DIMPPP QVE+E+GEKRV+SFHG G+SV PEI++ D+    KN EEAK VY QA YNSV EQYNVLK+AIHG+QG  AS P+ SLSQPW
Sbjct:  272 RVITDPLCKPFSMGRNLLCVYSKKHMYDDPELVDVKKRANTRSLKELVLLLRGGSKIIWIAPSGGRDRPDAVTGEWYPGTFDFAALDNMRRLVEHAGRPGHIYPLALLCYDIMPPPAQVEKEIGEKRVMSFHGVGVSVEPEINYNDVSLGCKNDEEAKSVYGQALYNSVNEQYNVLKAAIHGKQGSGASTPTTSLSQPW 470          
BLAST of FC922557 vs. ExPASy Swiss-Prot
Match: PLSB_ARATH (Glycerol-3-phosphate acyltransferase, chloroplastic OS=Arabidopsis thaliana GN=ATS1 PE=1 SV=2)

HSP 1 Score: 319.701 bits (818), Expect = 1.217e-86
Identity = 145/199 (72.86%), Postives = 171/199 (85.93%), Query Frame = 1
Query:    1 RVITDPLCKPFSMGRNLICVYSKKHMLDVPELIEMKRKSNTRSLKEMALLLRGGSQIIWIAPSGGRDRPDPVTGEWYPAPFDTSSIDNMRRLAEHSGIPGHIYPLALLCHDIMPPPPQVEREVGEKRVISFHGAGLSVAPEISFPDIITASKNPEEAKEVYTQAFYNSVTEQYNVLKSAIHGQQGLKASIPSVSLSQPW 597
            RVITDPLCKPFSMGRNLICVYSKKHM D PEL++MKRK+NTRSLKEMA +LR G Q+IWIAPSGGRDRP+P TGEW+PAPFD SS+DNMRRL EHSG PGHIYP++LLC+DIMPPPPQVE+E+GEKR++ FHG GLS+APEI+F D+    ++P EAKE Y+QA Y SV EQY +L SAI  ++G++AS   VSLSQPW
Sbjct:  260 RVITDPLCKPFSMGRNLICVYSKKHMNDDPELVDMKRKANTRSLKEMATMLRSGGQLIWIAPSGGRDRPNPSTGEWFPAPFDASSVDNMRRLVEHSGAPGHIYPMSLLCYDIMPPPPQVEKEIGEKRLVGFHGTGLSIAPEINFSDVTADCESPNEAKEAYSQALYKSVNEQYEILNSAIKHRRGVEASTSRVSLSQPW 458          
BLAST of FC922557 vs. ExPASy Swiss-Prot
Match: PLSB_PHAVU (Glycerol-3-phosphate acyltransferase, chloroplastic OS=Phaseolus vulgaris GN=PLSB PE=2 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 1.030e-85
Identity = 147/199 (73.87%), Postives = 172/199 (86.43%), Query Frame = 1
Query:    1 RVITDPLCKPFSMGRNLICVYSKKHMLDVPELIEMKRKSNTRSLKEMALLLRGGSQIIWIAPSGGRDRPDPVTGEWYPAPFDTSSIDNMRRLAEHSGIPGHIYPLALLCHDIMPPPPQVEREVGEKRVISFHGAGLSVAPEISFPDIITASKNPEEAKEVYTQAFYNSVTEQYNVLKSAIHGQQGLKASIPSVSLSQPW 597
            RVITDPL KPFS+GRNLICVYSKKHMLD P L+EMKR +N R+LKEMA+LLR GSQ++WIAPSGGRDRPD  T EW PAPFD SS+DNMRRL EHSG PGH+YPLA+LCHDIMPPP +VE+E+GEKR+I FHGAG+SVAP ISF +     +NPE+AKEV+++A YNSVTEQYNVLKSAI G++G +AS P V+LSQPW
Sbjct:  262 RVITDPLSKPFSIGRNLICVYSKKHMLDDPALVEMKRTANIRALKEMAMLLRNGSQLVWIAPSGGRDRPDAQTREWVPAPFDISSVDNMRRLVEHSGPPGHVYPLAILCHDIMPPPLKVEKEIGEKRIICFHGAGISVAPAISFSETTATCENPEKAKEVFSKALYNSVTEQYNVLKSAIQGKKGFEASTPVVTLSQPW 460          
BLAST of FC922557 vs. ExPASy Swiss-Prot
Match: PLSB_CARTI (Glycerol-3-phosphate acyltransferase, chloroplastic OS=Carthamus tinctorius PE=2 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.758e-85
Identity = 148/199 (74.37%), Postives = 174/199 (87.44%), Query Frame = 1
Query:    1 RVITDPLCKPFSMGRNLICVYSKKHMLDVPELIEMKRKSNTRSLK-EMALLLRGGSQIIWIAPSGGRDRPDPVTGEWYPAPFDTSSIDNMRRLAEHSGIPGHIYPLALLCHDIMPPPPQVEREVGEKRVISFHGAGLSVAPEISFPDIITASKNPEEAKEVYTQAFYNSVTEQYNVLKSAIHGQQGLKASIPSVSLSQP 594
            RVITDPLCKPFSMGRNL+CVYSKKHM DVPEL EMK++SNTRSLK  MALLLRGGS+IIWIAPSGGRDRPDP+T +W+PAPFD +S+DNMRRL +H+G+ GHIYPLA+LCHDIMPPP QVE+E+GEK  ISFHG G+SVAPEI+F ++  +  +PEEAK  Y+QA Y+SV EQY VL SA+HG +GL+AS PSVSLSQP
Sbjct:  260 RVITDPLCKPFSMGRNLLCVYSKKHMNDVPELAEMKKRSNTRSLKGRMALLLRGGSKIIWIAPSGGRDRPDPITNQWFPAPFDATSLDNMRRLVDHAGLVGHIYPLAILCHDIMPPPLQVEKEIGEKSWISFHGTGISVAPEINFQEVTASCGSPEEAKAAYSQALYDSVCEQYKVLHSAVHGGKGLEASTPSVSLSQP 458          
The following BLAST results are available for this feature:
BLAST of FC922557 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
PLSB_CUCSA3.422e-8976.88Glycerol-3-phosphate acyltransferase, chloroplasti... [more]
PLSB_CUCMO3.422e-8976.88Glycerol-3-phosphate acyltransferase, chloroplasti... [more]
PLSB_PEA8.430e-8875.88Glycerol-3-phosphate acyltransferase, chloroplasti... [more]
PLSB_SPIOL1.438e-8774.87Glycerol-3-phosphate acyltransferase, chloroplasti... [more]
PLSB_ARATH1.217e-8672.86Glycerol-3-phosphate acyltransferase, chloroplasti... [more]
PLSB_PHAVU1.030e-8573.87Glycerol-3-phosphate acyltransferase, chloroplasti... [more]
PLSB_CARTI1.758e-8574.37Glycerol-3-phosphate acyltransferase, chloroplasti... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAM2CH04RM1 SLH Citrus sinensis cDNA clone KN0AAM2CH04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922557 ID=FC922557; Name=FC922557; organism=Citrus sinensis; type=EST; length=814bp
AGAGTTATAACCGATCCTCTCTGCAAGCCCTTCAGCATGGGAAGGAATCT
AATATGTGTGTACTCAAAAAAGCACATGCTTGATGTCCCTGAGCTAATTG
AGATGAAAAGGAAATCGAATACACGTAGTTTGAAGGAAATGGCTTTGCTT
TTAAGGGGTGGATCACAAATAATTTGGATTGCACCAAGTGGTGGCAGGGA
CCGTCCAGATCCTGTTACAGGAGAATGGTATCCAGCACCCTTTGACACTT
CTTCAATAGACAATATGAGAAGGCTTGCGGAGCATTCTGGTATTCCAGGG
CATATTTATCCCTTGGCACTCTTATGTCATGACATCATGCCCCCTCCACC
ACAGGTAGAAAGAGAAGTTGGAGAGAAAAGAGTGATCTCCTTCCATGGGG
CTGGATTGTCAGTTGCGCCAGAAATTAGCTTTCCAGATATCATTACTGCT
AGCAAAAATCCTGAAGAGGCTAAGGAGGTTTATACACAAGCCTTTTATAA
TTCTGTGACCGAGCAATACAATGTGCTCAAATCTGCTATACATGGTCAAC
AAGGACTCAAGGCATCAATTCCAAGTGTGTCTTTGTCACAACCATGGGGC
GACTAATTTTCTCAGATATAATTTTGCAACCTTACGGATATGTTGATAGA
AGTATGCACTGCAACTGCAATCTGAAGTCCATTGATGATATATGATGGGA
AATTGCCATCATCCCGTCTTTAATAGAAGAAGCTGAATCCATCAGAATTG
AAGCAACTGCCCCAGAAGCTCAAAATCTCAGGTGTACTTTGTACATATCT
TAGTTCTAAGCATT
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