EY745104 | Citrus Genome Database

Overview


Name	EY745104
Unique Name	EY745104
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	939

Libraries


Library Name	Type
Sweet orange flower, greenhouse plant	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

BLAST of EY745104 vs. ExPASy Swiss-Prot
Match: UBC35_ARATH (Ubiquitin carrier protein E2 35 OS=Arabidopsis thaliana GN=UBC35 PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 9.073e-59
Identity = 95/97 (97.94%), Postives = 95/97 (97.94%), Query Frame = 3

Query:   69 MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTTIYHPNIDKLGRICLDILNDKW 359
            MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLT IYHPNIDKLGRICLDIL DKW
Sbjct:    1 MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKW 97

HSP 2 Score: 51.9878 bits (123), Expect = 9.073e-59
Identity = 23/34 (67.65%), Postives = 27/34 (79.41%), Query Frame = 1

Query:  364 PPLQIRTVLLSIQALMEVPNPDDPNAARVAEDWK 465
            P LQIRTVLLSIQAL+  PNPDDP +  +A+ WK
Sbjct:   99 PALQIRTVLLSIQALLSAPNPDDPLSENIAKHWK 132

BLAST of EY745104 vs. ExPASy Swiss-Prot
Match: UBC36_ARATH (Ubiquitin carrier protein E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.622e-58
Identity = 94/97 (96.91%), Postives = 95/97 (97.94%), Query Frame = 3

Query:   69 MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTTIYHPNIDKLGRICLDILNDKW 359
            MANSNLPRRIIKETQRLLSEPAPGISASPSE+NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLT IYHPNIDKLGRICLDIL DKW
Sbjct:    1 MANSNLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKW 97

HSP 2 Score: 51.9878 bits (123), Expect = 2.622e-58
Identity = 23/34 (67.65%), Postives = 27/34 (79.41%), Query Frame = 1

Query:  364 PPLQIRTVLLSIQALMEVPNPDDPNAARVAEDWK 465
            P LQIRTVLLSIQAL+  PNPDDP +  +A+ WK
Sbjct:   99 PALQIRTVLLSIQALLSAPNPDDPLSENIAKHWK 132

BLAST of EY745104 vs. ExPASy Swiss-Prot
Match: UBE2N_RAT (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 5.572e-49
Identity = 74/94 (78.72%), Postives = 81/94 (86.17%), Query Frame = 3

Query:   78 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTTIYHPNIDKLGRICLDILNDKW 359
            + LPRRIIKETQRLL+EP PGI A P E N RYF+V+I GP  SP+EGG FKLELFLPEEYPMAAPKVRF+T IYHPN+DKLGRICLDIL DKW
Sbjct:    2 AGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKW 95

HSP 2 Score: 54.299 bits (129), Expect = 5.572e-49
Identity = 26/34 (76.47%), Postives = 27/34 (79.41%), Query Frame = 1

Query:  364 PPLQIRTVLLSIQALMEVPNPDDPNAARVAEDWK 465
            P LQIRTVLLSIQAL+  PNPDDP A  VAE WK
Sbjct:   97 PALQIRTVLLSIQALLSAPNPDDPLANDVAEQWK 130

BLAST of EY745104 vs. ExPASy Swiss-Prot
Match: UBE2N_PONAB (Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii GN=UBE2N PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 5.572e-49
Identity = 74/94 (78.72%), Postives = 81/94 (86.17%), Query Frame = 3

Query:   78 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTTIYHPNIDKLGRICLDILNDKW 359
            + LPRRIIKETQRLL+EP PGI A P E N RYF+V+I GP  SP+EGG FKLELFLPEEYPMAAPKVRF+T IYHPN+DKLGRICLDIL DKW
Sbjct:    2 AGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKW 95

HSP 2 Score: 54.299 bits (129), Expect = 5.572e-49
Identity = 26/34 (76.47%), Postives = 27/34 (79.41%), Query Frame = 1

Query:  364 PPLQIRTVLLSIQALMEVPNPDDPNAARVAEDWK 465
            P LQIRTVLLSIQAL+  PNPDDP A  VAE WK
Sbjct:   97 PALQIRTVLLSIQALLSAPNPDDPLANDVAEQWK 130

BLAST of EY745104 vs. ExPASy Swiss-Prot
Match: UBE2N_MOUSE (Ubiquitin-conjugating enzyme E2 N OS=Mus musculus GN=Ube2n PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 5.572e-49
Identity = 74/94 (78.72%), Postives = 81/94 (86.17%), Query Frame = 3

Query:   78 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTTIYHPNIDKLGRICLDILNDKW 359
            + LPRRIIKETQRLL+EP PGI A P E N RYF+V+I GP  SP+EGG FKLELFLPEEYPMAAPKVRF+T IYHPN+DKLGRICLDIL DKW
Sbjct:    2 AGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKW 95

HSP 2 Score: 54.299 bits (129), Expect = 5.572e-49
Identity = 26/34 (76.47%), Postives = 27/34 (79.41%), Query Frame = 1

Query:  364 PPLQIRTVLLSIQALMEVPNPDDPNAARVAEDWK 465
            P LQIRTVLLSIQAL+  PNPDDP A  VAE WK
Sbjct:   97 PALQIRTVLLSIQALLSAPNPDDPLANDVAEQWK 130

BLAST of EY745104 vs. ExPASy Swiss-Prot
Match: UBE2N_HUMAN (Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens GN=UBE2N PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 5.572e-49
Identity = 74/94 (78.72%), Postives = 81/94 (86.17%), Query Frame = 3

Query:   78 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTTIYHPNIDKLGRICLDILNDKW 359
            + LPRRIIKETQRLL+EP PGI A P E N RYF+V+I GP  SP+EGG FKLELFLPEEYPMAAPKVRF+T IYHPN+DKLGRICLDIL DKW
Sbjct:    2 AGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKW 95

HSP 2 Score: 54.299 bits (129), Expect = 5.572e-49
Identity = 26/34 (76.47%), Postives = 27/34 (79.41%), Query Frame = 1

Query:  364 PPLQIRTVLLSIQALMEVPNPDDPNAARVAEDWK 465
            P LQIRTVLLSIQAL+  PNPDDP A  VAE WK
Sbjct:   97 PALQIRTVLLSIQALLSAPNPDDPLANDVAEQWK 130

BLAST of EY745104 vs. ExPASy Swiss-Prot
Match: UBE2N_BOVIN (Ubiquitin-conjugating enzyme E2 N OS=Bos taurus GN=UBE2N PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 5.572e-49
Identity = 74/94 (78.72%), Postives = 81/94 (86.17%), Query Frame = 3

Query:   78 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTTIYHPNIDKLGRICLDILNDKW 359
            + LPRRIIKETQRLL+EP PGI A P E N RYF+V+I GP  SP+EGG FKLELFLPEEYPMAAPKVRF+T IYHPN+DKLGRICLDIL DKW
Sbjct:    2 AGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKW 95

HSP 2 Score: 54.299 bits (129), Expect = 5.572e-49
Identity = 26/34 (76.47%), Postives = 27/34 (79.41%), Query Frame = 1

Query:  364 PPLQIRTVLLSIQALMEVPNPDDPNAARVAEDWK 465
            P LQIRTVLLSIQAL+  PNPDDP A  VAE WK
Sbjct:   97 PALQIRTVLLSIQALLSAPNPDDPLANDVAEQWK 130

BLAST of EY745104 vs. ExPASy Swiss-Prot
Match: UBE2N_MACFA (Ubiquitin-conjugating enzyme E2 N OS=Macaca fascicularis GN=UBE2N PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 2.732e-48
Identity = 73/94 (77.66%), Postives = 80/94 (85.11%), Query Frame = 3

Query:   78 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTTIYHPNIDKLGRICLDILNDKW 359
            + LPRRIIKETQRLL+EP PGI A P E N RYF+V+I GP  SP+EGG FKLELFLPEEYPMAAPKVRF+T IYHPN+DK GRICLDIL DKW
Sbjct:    2 AGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKSGRICLDILKDKW 95

HSP 2 Score: 54.299 bits (129), Expect = 2.732e-48
Identity = 26/34 (76.47%), Postives = 27/34 (79.41%), Query Frame = 1

Query:  364 PPLQIRTVLLSIQALMEVPNPDDPNAARVAEDWK 465
            P LQIRTVLLSIQAL+  PNPDDP A  VAE WK
Sbjct:   97 PALQIRTVLLSIQALLSAPNPDDPLANDVAEQWK 130

BLAST of EY745104 vs. ExPASy Swiss-Prot
Match: UBE2N_DROME (Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster GN=ben PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 6.054e-48
Identity = 71/94 (75.53%), Postives = 84/94 (89.36%), Query Frame = 3

Query:   78 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTTIYHPNIDKLGRICLDILNDKW 359
            S+LPRRIIKETQRL+ EP PGI+A P E+N RYF+V++ GP  SP+EGGVFKLELFLPE+YPM+APKVRF+T IYHPNID+LGRICLD+L DKW
Sbjct:    2 SSLPRRIIKETQRLMQEPVPGINAIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDVLKDKW 95

HSP 2 Score: 52.373 bits (124), Expect = 6.054e-48
Identity = 25/34 (73.53%), Postives = 27/34 (79.41%), Query Frame = 1

Query:  364 PPLQIRTVLLSIQALMEVPNPDDPNAARVAEDWK 465
            P LQIRT+LLSIQAL+  PNPDDP A  VAE WK
Sbjct:   97 PALQIRTILLSIQALLSAPNPDDPLANDVAELWK 130

BLAST of EY745104 vs. ExPASy Swiss-Prot
Match: UBE2N_DICDI (Probable ubiquitin-conjugating enzyme E2 N OS=Dictyostelium discoideum GN=ube2n PE=3 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 2.276e-47
Identity = 72/94 (76.60%), Postives = 82/94 (87.23%), Query Frame = 3

Query:   78 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTTIYHPNIDKLGRICLDILNDKW 359
            + LP+RIIKETQRL++EPAPGISA+P+ DN RYF V I GP  SP+EGGVF LELFL ++YPM+APKVRFLT IYHPNIDKLGRICLDIL DKW
Sbjct:    2 ATLPKRIIKETQRLMTEPAPGISATPATDNFRYFKVAISGPLDSPFEGGVFNLELFLTDDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKW 95

HSP 2 Score: 53.9138 bits (128), Expect = 2.276e-47
Identity = 26/34 (76.47%), Postives = 27/34 (79.41%), Query Frame = 1

Query:  364 PPLQIRTVLLSIQALMEVPNPDDPNAARVAEDWK 465
            P LQIRTVLLSIQAL+  PNPDDP A  VAE WK
Sbjct:   97 PALQIRTVLLSIQALLSAPNPDDPLANDVAEHWK 130

The following BLAST results are available for this feature:

BLAST of EY745104 vs. ExPASy Swiss-Prot

BLAST of EY745104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 182


Match Name	E-value	Identity	Description
UBC35_ARATH	9.073e-59	97.94	Ubiquitin carrier protein E2 35 OS=Arabidopsis tha...	[more]
UBC36_ARATH	2.622e-58	96.91	Ubiquitin carrier protein E2 36 OS=Arabidopsis tha...	[more]
UBE2N_RAT	5.572e-49	78.72	Ubiquitin-conjugating enzyme E2 N OS=Rattus norveg...	[more]
UBE2N_PONAB	5.572e-49	78.72	Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii ...	[more]
UBE2N_MOUSE	5.572e-49	78.72	Ubiquitin-conjugating enzyme E2 N OS=Mus musculus ...	[more]
UBE2N_HUMAN	5.572e-49	78.72	Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens ...	[more]
UBE2N_BOVIN	5.572e-49	78.72	Ubiquitin-conjugating enzyme E2 N OS=Bos taurus GN...	[more]
UBE2N_MACFA	2.732e-48	77.66	Ubiquitin-conjugating enzyme E2 N OS=Macaca fascic...	[more]
UBE2N_DROME	6.054e-48	75.53	Ubiquitin-conjugating enzyme E2 N OS=Drosophila me...	[more]
UBE2N_DICDI	2.276e-47	76.60	Probable ubiquitin-conjugating enzyme E2 N OS=Dict...	[more]

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Properties


Property Name	Value
Genbank description	CS00-C5-003-026-A01-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY745104 ID=EY745104; Name=EY745104; organism=Citrus sinensis; type=EST; length=939bp
AAACCCTATCAGCGTTCTTTCTCTGCACAACAAGAAGGTTAAAAAACAAA
AAAAAATCGATCTTGGAAATGGCGAACAGTAATCTCCCTCGACGTATCAT
CAAGGAAACACAGCGTCTCCTCAGTGAACCAGCACCAGGAATAAGTGCAT
CTCCCTCGGAAGATAATATGCGATACTTTAATGTGATGATCCTTGGTCCA
ACACAATCTCCATATGAAGGAGGGGTGTTCAAATTGGAATTATTTTTGCC
TGAAGAATATCCAATGGCTGCTCCAAAGGTCCGATTTCTTACCACGATAT
ATCATCCTAACATTGATAAGCTTGGAAGGATTTGTCTTGATATTCTGAAC
GACAAATGGAGGTCCACCTCTCCAGATTCGGACTGTACTTTTGAGCATTC
AGGCACTTATGGAAGTTCCTAACCCCGATGACCCTAACGCTGCGAGAGTT
GCCGAAGACTGGAAAAAGGAATGACGGCCAACAGGTACACAATCCGAACA
GGAAGCACACACGAGATAGAGGCTAGGGCGCCTGAGAAGCATGAAGTAAA
GAATCCACTTGTGTCCCGTGGCCGACTGCGTGCCGTAGCGTAGCCGACGG
GGCTCAAAGGGGAAAAGGAAGAGGGACATCCCGAACACCGCAGACAAAAA
CAGAACAACAAACGAAGAAAGCAGACCCGGACAAGAGACAAAAGAAACGA
GACAATGACAGCCTCGCACAACACAATTCTCGCACACCATCAAACGCCCA
CCGGACCCGACGTAGCACAATCGCAAGTCAGCAAGAGCAAACGAAACAGG
CGATGAGGAGAGGTGACACGGAAGGCAGATAATACCAAAAACGAGGACAC
CGAACAAGCAGAGGTCAGGCGAGACACAACCACCACGTGAGACACCAACC
AAAGAACACTGAACGCTTAAAACGAGCCACGATAGCACG