EY681646

Overview
NameEY681646
Unique NameEY681646
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length933
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY681646 vs. ExPASy Swiss-Prot
Match: GUAA_HELHP (Probable GMP synthase [glutamine-hydrolyzing] OS=Helicobacter hepaticus GN=guaA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.661e-15
Identity = 41/98 (41.84%), Postives = 54/98 (55.10%), Query Frame = 3 
Query:  369 EASPVNSGPIK--RCDWITPNSDP---LYISFHDEEWGVPVYDDRKLFELLVFSQALAELSWPAILSRRDIFRKLFDNFDISSVSQFTEKKLLSLKVN 647
            EA   N G  +  RC W T   +    LY  +HD EWG P+++D+KLFE LV     A LSW  IL +R+ FR  FD+FD   V+ + E K+  L  N
Sbjct:  774 EAQDSNEGVREKVRCAWATDKDEAARKLYEDYHDTEWGEPLHEDKKLFEHLVLEGFQAGLSWITILKKREAFRVAFDDFDPHIVANYDEDKIKELMRN 871

HSP 2 Score: 29.261 bits (64), Expect = 2.661e-15
Identity = 13/34 (38.24%), Postives = 21/34 (61.76%), Query Frame = 1 
Query:  673 KLRAIVENAKQMLQVPQEFGFFYQVLVGTLGTRP 774
            K+ A + NAK  + V +EFG F + + G +G +P
Sbjct:  880 KIEAAIINAKAFMAVQREFGSFDKYIWGFVGGKP 913
[Close]
BLAST of EY681646 vs. ExPASy Swiss-Prot
Match: 3MG1_ECOLI (DNA-3-methyladenine glycosylase 1 OS=Escherichia coli (strain K12) GN=tag PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.152e-12
Identity = 32/76 (42.11%), Postives = 47/76 (61.84%), Query Frame = 3 
Query:  396 IKRCDWITPNSDPLYISFHDEEWGVPVYDDRKLFELLVFSQALAELSWPAILSRRDIFRKLFDNFDISSVSQFTEK 623
            ++RC W++   DPLYI++HD EWGVP  D +KLFE++      A LSW  +L +R+ +R  F  FD   V+   E+
Sbjct:    1 MERCGWVS--QDPLYIAYHDNEWGVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRACFHQFDPVKVAAMQEE 74
The following BLAST results are available for this feature:
BLAST of EY681646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
GUAA_HELHP2.661e-1541.84Probable GMP synthase [glutamine-hydrolyzing] OS=H... [more]
3MG1_ECOLI4.152e-1242.11DNA-3-methyladenine glycosylase 1 OS=Escherichia c... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-024-C10-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY681646 ID=EY681646; Name=EY681646; organism=Citrus sinensis; type=EST; length=933bp
CCACGCGTCCGCACATTATTAAAATTTCAGTGTTTATATAAACTTCCATG
GCTACGAAGGTTCAATCACTGGCCAGACCGGTCTCCGAACAGCGGGCTAT
TCTCGGACCGACCGGTAACAGAGTTAGGGCTTCCCAAGACCCGAAACGGA
AAACTGAAGTCCCAAAGAAGCCGAAAAAACCGGCTCCCAAAATTCCGGAA
CCGGTTATCAGGAACAATGCGTCGGTGGACAGCTCATGTTCCTCGGAATC
ATCTACTTCGAGTGCTGCTTCGGCCAAGAGAATGGAGAATTCTAGAAGAA
GTGTAACGGCGAAGCGTAACGGCGTGAAGAATATGAAAGTCGTTCCCCAT
GCTAGTGCCGAAATTCCAGAAGCTTCACCCGTGAACTCAGGGCCGATTAA
GAGGTGTGATTGGATCACACCCAACTCTGATCCACTTTATATTTCTTTCC
ACGATGAAGAATGGGGAGTTCCTGTTTATGACGACAGGAAGCTGTTTGAG
TTGCTAGTCTTTTCACAAGCATTAGCAGAACTTAGCTGGCCAGCAATTCT
CAGCAGGAGAGACATATTTAGGAAGCTTTTTGACAATTTCGACATATCAT
CCGTTTCACAGTTTACTGAGAAGAAGTTGCTGTCATTGAAGGTAAACGGG
GAGCCTACTGTTATCTGGACCCAAGCTACGTGCAATTGTTGAAAATGCTA
AGCAAATGCTCCAGGTTCCACAAGAATTTGGGTTCTTTTACCAAGTATTG
GTGGGAACTTTGGGAACCAGGCCCCGGTGAAAAAATGGATTTCGTTACCC
CCCGTCCAGTAACCGGTCCAAGAACCCCAAAAGCCAAAAATCCTCAACAA
AGGGATCTAAAGGGAAAAAGGGGTTCCGGTTGGGGGGGGTCCCCAAGGGA
ATTTTATTTCTTTCCGGGGCAAGGGGGCCGGGG
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