EY681634

Overview
NameEY681634
Unique NameEY681634
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length485
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY681634 vs. ExPASy Swiss-Prot
Match: GCSP_PEA (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Pisum sativum GN=GDCSP PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.487e-31
Identity = 58/66 (87.88%), Postives = 62/66 (93.94%), Query Frame = 1
Query:   13 ADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 210
            AD+HNNVLKGAPHPPSLLM D WTKPYSREYAA+PA+WLR AKFWP TGRVDNVYGDRNL+CTLLP
Sbjct:  979 ADVHNNVLKGAPHPPSLLMADAWTKPYSREYAAFPAAWLRGAKFWPTTGRVDNVYGDRNLVCTLLP 1044          
BLAST of EY681634 vs. ExPASy Swiss-Prot
Match: GCSP_SOLTU (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Solanum tuberosum GN=GDCSP PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.259e-30
Identity = 58/65 (89.23%), Postives = 60/65 (92.31%), Query Frame = 1
Query:   16 DIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 210
            DI+NNVLKGAPHPPS+LM D WTKPYSREYAAYPA WLR AKFWP TGRVDNVYGDRNLICTLLP
Sbjct:  959 DINNNVLKGAPHPPSMLMADAWTKPYSREYAAYPAPWLRSAKFWPTTGRVDNVYGDRNLICTLLP 1023          
BLAST of EY681634 vs. ExPASy Swiss-Prot
Match: GCSP2_ARATH (Glycine dehydrogenase [decarboxylating] 2, mitochondrial OS=Arabidopsis thaliana GN=At4g33010 PE=1 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 2.374e-29
Identity = 55/66 (83.33%), Postives = 59/66 (89.39%), Query Frame = 1
Query:   13 ADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 210
            AD+ NNVLKGAPHPPSLLM DTW KPYSREYAA+PA WLR +KFWP TGRVDNVYGDR L+CTLLP
Sbjct:  961 ADVQNNVLKGAPHPPSLLMADTWKKPYSREYAAFPAPWLRSSKFWPTTGRVDNVYGDRKLVCTLLP 1026          
BLAST of EY681634 vs. ExPASy Swiss-Prot
Match: GCSP1_ARATH (Glycine dehydrogenase [decarboxylating] 1, mitochondrial OS=Arabidopsis thaliana GN=GDCSP PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 9.023e-29
Identity = 55/66 (83.33%), Postives = 59/66 (89.39%), Query Frame = 1
Query:   13 ADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 210
            AD +NNVLKGAPHPPSLLM DTW KPYSREYAA+PA WLR +KFWP TGRVDNVYGDRNL+CTL P
Sbjct:  967 ADPNNNVLKGAPHPPSLLMADTWKKPYSREYAAFPAPWLRSSKFWPTTGRVDNVYGDRNLVCTLQP 1032          
BLAST of EY681634 vs. ExPASy Swiss-Prot
Match: GCSPA_FLAPR (Glycine dehydrogenase [decarboxylating] A, mitochondrial OS=Flaveria pringlei GN=GDCSPA PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 4.478e-28
Identity = 54/65 (83.08%), Postives = 57/65 (87.69%), Query Frame = 1
Query:   16 DIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 210
            D++NNV+KGAPHPP LLM D WTKPYSREYAAYPA WLR AKFWP T RVDNVYGDRNLICTL P
Sbjct:  961 DLNNNVIKGAPHPPQLLMADKWTKPYSREYAAYPAPWLRAAKFWPTTCRVDNVYGDRNLICTLQP 1025          
BLAST of EY681634 vs. ExPASy Swiss-Prot
Match: GCSP_FLATR (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Flaveria trinervia GN=GDCSPA PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 7.638e-28
Identity = 54/65 (83.08%), Postives = 56/65 (86.15%), Query Frame = 1
Query:   16 DIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 210
            D +NNV+KGAPHPP LLM D WTKPYSREYAAYPA WLR AKFWP T RVDNVYGDRNLICTL P
Sbjct:  958 DFNNNVIKGAPHPPQLLMADKWTKPYSREYAAYPAPWLRAAKFWPTTCRVDNVYGDRNLICTLQP 1022          
BLAST of EY681634 vs. ExPASy Swiss-Prot
Match: GCSP_FLAAN (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Flaveria anomala GN=GDCSP PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 7.638e-28
Identity = 54/65 (83.08%), Postives = 56/65 (86.15%), Query Frame = 1
Query:   16 DIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 210
            D +NNV+KGAPHPP LLM D WTKPYSREYAAYPA WLR AKFWP T RVDNVYGDRNLICTL P
Sbjct:  958 DFNNNVIKGAPHPPQLLMADKWTKPYSREYAAYPAPWLRAAKFWPTTCRVDNVYGDRNLICTLQP 1022          
BLAST of EY681634 vs. ExPASy Swiss-Prot
Match: GCSPB_FLAPR (Glycine dehydrogenase [decarboxylating] B, mitochondrial OS=Flaveria pringlei GN=GDCSPB PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 7.638e-28
Identity = 54/65 (83.08%), Postives = 56/65 (86.15%), Query Frame = 1
Query:   16 DIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 210
            D +NNV+KGAPHPP LLM D WTKPYSREYAAYPA WLR AKFWP T RVDNVYGDRNLICTL P
Sbjct:  958 DFNNNVIKGAPHPPQLLMADKWTKPYSREYAAYPAPWLRAAKFWPTTCRVDNVYGDRNLICTLQP 1022          
BLAST of EY681634 vs. ExPASy Swiss-Prot
Match: GCSP_BDEBA (Glycine dehydrogenase [decarboxylating] OS=Bdellovibrio bacteriovorus GN=gcvP PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.487e-18
Identity = 39/64 (60.94%), Postives = 42/64 (65.62%), Query Frame = 1
Query:   10 RADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICT 201
            + D  NN LK APH   +LM   W  PYSRE A YP  WLR  KFWP  GRVDN YGDRNLIC+
Sbjct:  886 KMDKENNALKNAPHTAQMLMKPEWNHPYSREEAVYPVEWLRGNKFWPVVGRVDNAYGDRNLICS 949          
BLAST of EY681634 vs. ExPASy Swiss-Prot
Match: GCSP_THEEB (Glycine dehydrogenase [decarboxylating] OS=Thermosynechococcus elongatus (strain BP-1) GN=gcvP PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.596e-17
Identity = 38/63 (60.32%), Postives = 44/63 (69.84%), Query Frame = 1
Query:   13 ADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICT 201
            +D   N LK APHP  +L  + W  PYSRE AAYPA WLR  KFWPA  R+DN YGDR+L+CT
Sbjct:  885 SDRQQNPLKNAPHPALMLATEPWPYPYSREVAAYPAPWLREYKFWPAVARIDNAYGDRHLVCT 947          
The following BLAST results are available for this feature:
BLAST of EY681634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
GCSP_PEA1.487e-3187.88Glycine dehydrogenase [decarboxylating], mitochond... [more]
GCSP_SOLTU1.259e-3089.23Glycine dehydrogenase [decarboxylating], mitochond... [more]
GCSP2_ARATH2.374e-2983.33Glycine dehydrogenase [decarboxylating] 2, mitocho... [more]
GCSP1_ARATH9.023e-2983.33Glycine dehydrogenase [decarboxylating] 1, mitocho... [more]
GCSPA_FLAPR4.478e-2883.08Glycine dehydrogenase [decarboxylating] A, mitocho... [more]
GCSP_FLATR7.638e-2883.08Glycine dehydrogenase [decarboxylating], mitochond... [more]
GCSP_FLAAN7.638e-2883.08Glycine dehydrogenase [decarboxylating], mitochond... [more]
GCSPB_FLAPR7.638e-2883.08Glycine dehydrogenase [decarboxylating] B, mitocho... [more]
GCSP_BDEBA5.487e-1860.94Glycine dehydrogenase [decarboxylating] OS=Bdellov... [more]
GCSP_THEEB1.596e-1760.32Glycine dehydrogenase [decarboxylating] OS=Thermos... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-024-B09-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY681634 ID=EY681634; Name=EY681634; organism=Citrus sinensis; type=EST; length=485bp
CCACGCGTCCGGGCAGATATCCACAACAATGTCCTGAAGGGGGCGCCTCA
TCCACCATCTTTGCTCATGGGAGATACATGGACTAAACCATACTCTCGAG
AATATGCAGCCTATCCTGCTTCCTGGCTCCGGTTTGCTAAGTTCTGGCCT
GCTACAGGACGCGTTGACAATGTGTATGGTGACCGCAACCTCATCTGCAC
CCTTCTTCCAGCTGCACAAGTTGCTGAGGAGCAGGCTGCAGCCACTGCTT
AGAGTTGCCATCAACATGCCCCCTGGTGCAAGGTTTCTTCAGGAGCATGG
AAAAATTTGGAATCATCAGCACTTCCTGATTTGATTGTATATATGAATAC
AGAGCCTCATGGCCCAATGCTTCCCTTTGATATACTGATTAATTATATCA
GCTTCTTTAATAACAATAGTTGCTGATTGCAACTCAGGTACTGCAAATTA
TCATCCCCCTTTCTTCTCTTCAAAAAAAAAAAAAA
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