EY681624

Overview
NameEY681624
Unique NameEY681624
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY681624 vs. ExPASy Swiss-Prot
Match: SPL7_ARATH (Squamosa promoter-binding-like protein 7 OS=Arabidopsis thaliana GN=SPL7 PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 6.111e-23
Identity = 74/232 (31.90%), Postives = 118/232 (50.86%), Query Frame = 1
Query:    4 KQRFDASFFSKRSQFMASGLLSDLCEVSALRQKALTELLVDIAWLLKAPASESFRQTISCSEVQRFNQLLSFLIYNESTTILEKMLQNMKILMNNIESNIAVNGISDSDMGLLLKYMDYARGILCQKVKKDKGPMQHSGNIVPKMISSSQSCLQANSLVPSTKQDLVVRSNDKIGAVMGSATVDRC-------EVVPLLNREVVMNVNLIKEWPRKSCSPIFSGRVLSSLPT 678
            +Q+F+A+ F +  +  A   L+  C     RQ   + LL+DIAW +K P++E   Q ++  +++R+N++L++LI N S +IL  +L N++ L+  +E +  V+   D D+ LL + MD A  I     +K + P++   N      SS   C+ +   +PS  + L    + + G          C       E  PLLN+EVVMNVN I +WPRKSC    S     S  T
Sbjct:  542 EQKFNATLFPEGQEVTACSSLTCCCRDFGERQSTFSGLLLDIAWSVKVPSAERTEQPVNRCQIKRYNRVLNYLIQNNSASILGNVLHNLETLVKKMEPDSLVHCTCDCDVRLLHENMDLASDI----HRKHQSPIESKVN----PPSSGCCCVSSQKDIPS--RILNFNKDPEAGLDCKERIQADCSPDSGGKETDPLLNKEVVMNVNDIGDWPRKSCIKTHSALAFRSRQT 763          
BLAST of EY681624 vs. ExPASy Swiss-Prot
Match: SPL9_ORYSJ (Squamosa promoter-binding-like protein 9 OS=Oryza sativa subsp. japonica GN=SPL9 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.153e-11
Identity = 47/160 (29.38%), Postives = 81/160 (50.62%), Query Frame = 1
Query:   52 ASGLLSDLCEVSALRQKALTELLVDIAWLLKAPASESFRQTISCSEVQRFNQLLSFLIYNESTTILEKMLQNMKILMNNIESNIAVNGISDSDMGLL-------LKYMDYARGILCQKVKKDKG---PMQHSGNIVPKMISSSQSCLQANSLVPSTKQDL 501
            +S + SD CE+  LRQ A+   L+DI WL++ P+ + F+  +S + +QR+  ++ FLI N+   +LE       I++N++++ I    +S+ + G L       L Y+  AR I+  + K DK      + +G+  P       S   A S   S + DL
Sbjct:  597 SSDISSDPCELRGLRQTAMLGFLIDIGWLIRKPSIDEFQNLLSLANIQRWICMMKFLIQNDFINVLE-------IIVNSLDNIIGSELLSNLEKGRLENHVTEFLGYVSEARNIVDNRPKYDKQRQVDTRWAGDYAPNQPKLGISVPLAESTGTSGEHDL 749          
The following BLAST results are available for this feature:
BLAST of EY681624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
SPL7_ARATH6.111e-2331.90Squamosa promoter-binding-like protein 7 OS=Arabid... [more]
SPL9_ORYSJ9.153e-1129.38Squamosa promoter-binding-like protein 9 OS=Oryza ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-024-A11-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY681624 ID=EY681624; Name=EY681624; organism=Citrus sinensis; type=EST; length=864bp
AATAAGCAAAGATTTGACGCATCTTTCTTTTCTAAGAGATCTCAGTTTAT
GGCTAGTGGTTTGCTGTCTGACTTGTGTGAGGTTTCTGCATTGAGACAAA
AAGCATTAACTGAACTTCTTGTAGACATAGCATGGCTACTAAAGGCACCG
GCATCAGAAAGTTTTCGACAAACTATATCGTGTTCTGAAGTTCAGAGATT
TAATCAACTATTGAGTTTTCTGATATACAATGAGTCAACCACCATTTTGG
AGAAAATGTTGCAAAATATGAAGATTTTGATGAATAACATTGAGTCGAAC
ATTGCAGTTAATGGCATCAGTGACTCTGACATGGGGCTGTTACTTAAGTA
TATGGATTATGCGAGAGGGATTCTTTGTCAAAAAGTTAAGAAAGACAAAG
GCCCAATGCAGCACTCTGGGAACATTGTGCCGAAAATGATAAGCAGCTCT
CAAAGCTGCTTGCAAGCCAACTCACTTGTCCCTAGCACCAAGCAGGATTT
GGTGGTAAGATCAAACGATAAGATAGGTGCAGTGATGGGTTCAGCTACTG
TTGATAGGTGCGAAGTAGTGCCACTTTTGAACAGAGAGGTTGTTATGAAT
GTGAACCTTATCAAGGAATGGCCAAGAAAATCATGTAGTCCCATTTTCTC
TGGCAGAGTCTTGAGTTCTCTGCCCACGGGTAACTTGTAATAACAATGGC
TGCTGTTTGTTTTGGGGGTAAGTTTGGGGGGCCCCCCCCCCCTCAAAAGG
TTGGTCATTTTTGACAATCCCAACCCTCAATTCCTTTGTTTTGGGATTTT
GGAAAAATGTTTGAAAAAAGAGGTTTTTTAGAAACAAAAAAAACCCCCCC
TCATCCGTGAAATT
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