EY708707

Overview
NameEY708707
Unique NameEY708707
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length983
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY708707 vs. ExPASy Swiss-Prot
Match: AB8I_ARATH (UPF0051 protein ABCI8, chloroplastic OS=Arabidopsis thaliana GN=ABCI8 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.357e-16
Identity = 59/130 (45.38%), Postives = 73/130 (56.15%), Query Frame = 3 
Query:  132 MNSLLANGISSFSPQPTVDSPKLSKGFHPKLENPKVIVPKSSR----LFKVRADVGHGXXXXXXXXXXXPGNLTTSTQSSDDKIQEILRNRDYHEKFGFNWEIARRGVREGSRHKRSGRLPRGKKTRPDY 509
            M SLLANGISSFSPQPT DS K  KGFHPK E+ K   PKS      +FK+RADVG              G   TST SS DK+Q+  +N DY +K+GF  +I    + +G   + + RL    K  PD+
Sbjct:    1 MASLLANGISSFSPQPTSDSSKSPKGFHPKPESLKFPSPKSLNPTRPIFKLRADVGIDSRPIGASESSSSG---TSTVSSTDKLQQYFQNLDYDKKYGFVEDIDSFTIPKG-LSEETIRLISKLKEEPDW 126
The following BLAST results are available for this feature:
BLAST of EY708707 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AB8I_ARATH1.357e-1645.38UPF0051 protein ABCI8, chloroplastic OS=Arabidopsi... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-095-D02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY708707 ID=EY708707; Name=EY708707; organism=Citrus sinensis; type=EST; length=983bp
GGGGGGGGGGGGGGGGGGGGGGGAAAAGANTNTAAANNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTGCCCGACCACGCGTCCGAAAAAAAAACTTACT
GCTTTTTTTTTCCCCTCTCTCATCCACAACCATGAATTCTCTGCTAGCTA
ACGGAATTTCAAGCTTCTCTCCGCAGCCCACCGTTGATTCACCAAAACTC
TCGAAAGGGTTTCACCCAAAGCTCGAAAATCCCAAGGTCATAGTCCCCAA
AAGCTCAAGGCTCTTCAAGGTCCGTGCGGATGTCGGGCACGGGTCAAGCA
CCATCAGCTCCGACCCTAGCTCTTCGCCAGGTAATTTGACAACTTCTACC
CAGAGCTCCGATGATAAAATTCAAGAAATTTTACGCAACCGGGATTACCA
CGAGAAATTCGGGTTTAATTGGGAGATTGCTCGGCGAGGAGTCCGGGAGG
GGTCCCGACACAAGCGGAGCGGCCGACTTCCTCGCGGCAAAAAAACCCGA
CCGGATTATTGATAACAAAAGGACCGCAACCGAAAAATGCCACGGCTGCG
ACGAACACAATGTATGATGATCCAAACTCCTCAATACATAATTATAAATT
TTTTCTCTTACTCTCCTACACACCAGAGCGGTGGGTGGAAGTACTGGCAG
ATGGGTGAGGGGAAGTGTTGTACCGGCCTCGGAACAACGAACATGGAGCA
TGGCAAATAGTGATTTGAAACGACGGTTAGATAGAGATTAAGATACCAGT
TATCTCTAAACCACCAGACACGGCAATGAACTGCACTCTGGCCCCATCGA
TGTGTAGCTGTCTCCCATGCTTACCCTGGTGCACACACCGCCTGGAAACC
GACCACCGTTCTNCCTGAAGCCGCCTTCTATAGGCCATTTTATAATGCCC
GAACATATACGACCCACTTGAATCGGCAGACTATTCGACGGGAGGCGGGG
CCGGCGCGGAACAGCTCTGTATAGGTCGCATGT
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