EY708578
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY708578 vs. ExPASy Swiss-Prot
Match: VPS41_ARATH (Vacuolar protein sorting-associated protein 41 homolog OS=Arabidopsis thaliana GN=VPS41 PE=2 SV=3) HSP 1 Score: 152.91 bits (385), Expect = 4.351e-42 Identity = 72/90 (80.00%), Postives = 81/90 (90.00%), Query Frame = 1 Query: 253 PRLKYQRMGGSLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAVNDLSFDVHGEYVGRCSDDGSVVINSLFTDE 522 PRLKYQRMGG++P+LL+NDAASC+AVA RMIALGTH GTV ILD LGNQVKEF AHTA VND++FD GEY+G CSDDGSVVINSLFTD+ Sbjct: 42 PRLKYQRMGGNVPALLSNDAASCIAVAARMIALGTHDGTVRILDLLGNQVKEFRAHTAPVNDINFDTEGEYIGSCSDDGSVVINSLFTDD 131 HSP 2 Score: 40.4318 bits (93), Expect = 4.351e-42 Identity = 18/41 (43.90%), Postives = 22/41 (53.66%), Query Frame = 2 Query: 521 KQMTVDYHRPMNGVSLDPDYPVNCLQYLVLGGYPSHFTSTS 643 ++M DYHRPM +SLDPDY + V GG H S Sbjct: 132 EKMKFDYHRPMKAISLDPDYTKKQSKRFVAGGLAGHLYMNS 172
BLAST of EY708578 vs. ExPASy Swiss-Prot
Match: VPS41_SOLLC (Vacuolar protein sorting-associated protein 41 homolog OS=Solanum lycopersicum GN=VPS41 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 8.730e-39 Identity = 92/170 (54.12%), Postives = 101/170 (59.41%), Query Frame = 1 Query: 145 MAPFPAENGVXXXXXXXXXXXXXXXXXXXXXXXXXXPRLKYQRMGGSLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAVNDLSFDVHGEYVGRCSDDGSVVINSLFTDETNDSRLSSPDERRFSGPRLSS*LSTILGAGRLPKSFYLNFTNML 654 M+P P+ENG+ PRLKYQRMG S+PSLL+ DAA+C+AVAERMIALGTH G VHILDFLGNQVKEF AHTAAVNDL FD GEYVG CSDDGSVVINSLFTDE P + P + S G L YLN L Sbjct: 1 MSPKPSENGIDGDDERDEEEEDSEEEEAEEEEEDE-PRLKYQRMGASVPSLLSADAATCIAVAERMIALGTHGGAVHILDFLGNQVKEFAAHTAAVNDLCFDTDGEYVGSCSDDGSVVINSLFTDERMKFEYHRPMKAIALDPDYARTSSRRFVTGGLAGQLYLNVKKWL 169
BLAST of EY708578 vs. ExPASy Swiss-Prot
Match: VPS41_HUMAN (Vacuolar protein sorting-associated protein 41 homolog OS=Homo sapiens GN=VPS41 PE=2 SV=3) HSP 1 Score: 85.1149 bits (209), Expect = 6.088e-16 Identity = 37/90 (41.11%), Postives = 58/90 (64.44%), Query Frame = 1 Query: 253 PRLKYQRMGGSLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAVNDLSFDVHGEYVGRCSDDGSVVINSLFTDE 522 P+LKY+R+ + +L DAASC+ V ++ +ALGTH G V++LD GN ++F +N +S D GE++G CS+DG V + L++ E Sbjct: 28 PKLKYERLSNGVTEILQKDAASCMTVHDKFLALGTHYGKVYLLDVQGNITQKFDVSPVKINQISLDESGEHMGVCSEDGKVQVFGLYSGE 117
BLAST of EY708578 vs. ExPASy Swiss-Prot
Match: VPS41_MOUSE (Vacuolar protein sorting-associated protein 41 homolog OS=Mus musculus GN=Vps41 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.771e-15 Identity = 36/90 (40.00%), Postives = 58/90 (64.44%), Query Frame = 1 Query: 253 PRLKYQRMGGSLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAVNDLSFDVHGEYVGRCSDDGSVVINSLFTDE 522 P+LKY+R+ + +L DAASC+ V ++ +ALGTH G V++LD GN ++F +N +S D GE++G CS+DG + + L++ E Sbjct: 27 PKLKYERLSNGVTEILQKDAASCMTVHDKFLALGTHYGKVYLLDVQGNITQKFDVSPVKINQISLDDSGEHMGVCSEDGKLQVFGLYSGE 116 The following BLAST results are available for this feature:
BLAST of EY708578 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY708578 ID=EY708578; Name=EY708578; organism=Citrus sinensis; type=EST; length=917bpback to top |