EY681047

Overview
NameEY681047
Unique NameEY681047
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY681047 vs. ExPASy Swiss-Prot
Match: WRK19_ARATH (Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.251e-14
Identity = 55/148 (37.16%), Postives = 74/148 (50.00%), Query Frame = 3 
Query:    9 IQNFNNLSMLSLRDCVSLSCFPRNIHFRSPVKIDFSGCVNLTEFPHISGNVVELKLFNTPIEEVPSSIESLPNLKILNLGFCKRLKRVSTAICXXXXXXXXXXXXXXXXESFPEILETME-LKKLALDRSGIKELPSSIENLEGLKEL 449
            I     L  L+L+ C  L   P  +   S   ++ SGC  L  FP IS NV EL +  T I+E+PSSI++L  L+ L+L   + LK + T+I                 E FP+    M+ L+ L L R+ IKELPSSI  L  L EL
Sbjct: 1301 ISYLKKLVFLNLKGCSKLENIPSMVDLESLEVLNLSGCSKLGNFPEISPNVKELYMGGTMIQEIPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHLETLNLSGCISLERFPDSSRRMKCLRFLDLSRTDIKELPSSISYLTALDEL 1448
The following BLAST results are available for this feature:
BLAST of EY681047 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
WRK19_ARATH1.251e-1437.16Probable WRKY transcription factor 19 OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-017-G04-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY681047 ID=EY681047; Name=EY681047; organism=Citrus sinensis; type=EST; length=819bp
CCTCCCACATCCAGAATTTCAACAACCTTAGTATGTTGTCTTTGAGGGAC
TGCGTAAGTCTTAGTTGCTTTCCACGAAACATTCATTTTAGATCTCCCGT
AAAGATTGATTTCTCTGGTTGTGTTAATCTCACAGAGTTTCCACATATTT
CCGGAAATGTGGTAGAGCTAAAACTATTTAATACCCCAATAGAAGAAGTT
CCATCATCAATCGAGTCCCTACCTAATCTTAAAATCTTAAATTTGGGGTT
TTGCAAAAGGCTGAAGAGAGTTTCAACTGCCATTTGTAAATTGAAATATC
TTAGCTGCCTTTATCTTTTGGACTGCTCTGACCTTGAGAGTTTCCCTGAA
ATTTTGGAGACAATGGAACTCAAAAAACTTGCTTTAGATAGGTCAGGAAT
TAAGGAGCTGCCATCTTCAATTGAAAATCTTGAAGGCCTTAAGGAGCTGC
AGTTGATGTGTTGCTCTAAACTTGGTAGTTTGCCGGATAGCTTGGGAAAT
TTAAAATCTTTGGTGGTACTTGATGCAAAATAGATCGGCCATTCTTCAGC
TACCATCCTCTATAGCAAAATTTTAAACAAACTTAAAGAACTTTGCTTGT
CTGGAATGCAGAAGGTTTGCATTGCCTCCACTATCCACTTTATCTTCTTT
AAAAACGCAAACTTTAATTGGATGTGGGAAAAAAGAAATCCCCCAAAAAA
TTTGCTGGCTAACATCATTGGATTCCTTAATTTTGGCAAAAAAAAACTTT
AAAAGTTTACCTTCAAGTTATCAGCCCACTTTGCTTGTTCTGAGGGGGCT
TTTCCTTGAAAAATTGAAA
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