EY744944

Overview
NameEY744944
Unique NameEY744944
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length988
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY744944 vs. ExPASy Swiss-Prot
Match: BH143_ARATH (Transcription factor bHLH143 OS=Arabidopsis thaliana GN=BHLH143 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.407e-15
Identity = 53/112 (47.32%), Postives = 73/112 (65.18%), Query Frame = 2 
Query:   23 TLEISEEVASSDGPN-KRQKLLNGGYNKSSQTDTACSVQLEGSHECDNDAESGYANGQTQKEEVDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLK 355
            T E+ E  ++ DGP  KRQKLL+  Y  SS +    + +++G  + +N  ES  ++    K+E    L + QSRKDKIHTALRIL+ ++PGA GK+ L LLDEAIDYL+ LK
Sbjct:  208 TEELDETESTVDGPLLKRQKLLDHSYRDSSPSLVG-TTKVKGLSD-ENLPESNISS----KQETGSGLSDEQSRKDKIHTALRILESVVPGAKGKEALLLLDEAIDYLKLLK 313
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BLAST of EY744944 vs. ExPASy Swiss-Prot
Match: SAC51_ARATH (Transcription factor SAC51 OS=Arabidopsis thaliana GN=SAC51 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.187e-14
Identity = 52/116 (44.83%), Postives = 67/116 (57.76%), Query Frame = 2 
Query:   41 EVASSDGPNKRQKLL---NGGYNKSSQTDTACSVQLEGSHECDNDAESGYANGQTQKEEVDFILGNMQSRKDKIHTALRILQGIIPGANGKDPLSLLDEAIDYLQSLKLKAVALGV 379
            E+   DGP KRQKLL   N   + SS   T  S QL GS     D +   +   + KE+    L N QS+KDKI TAL+IL+ ++PGA G + L LLDEAIDYL+ LK   ++  V
Sbjct:  204 ELEEIDGPCKRQKLLDKVNNISDLSSLVGTESSTQLNGSSFL-KDKKLPESKTISTKEDTGSGLSNEQSKKDKIRTALKILESVVPGAKGNEALLLLDEAIDYLKLLKRDLISTEV 318
The following BLAST results are available for this feature:
BLAST of EY744944 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
BH143_ARATH4.407e-1547.32Transcription factor bHLH143 OS=Arabidopsis thalia... [more]
SAC51_ARATH2.187e-1444.83Transcription factor SAC51 OS=Arabidopsis thaliana... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-006-C03-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744944 ID=EY744944; Name=EY744944; organism=Citrus sinensis; type=EST; length=988bp
CCACGCGTCCGAGCATGATTTAACTCTGGAAATATCTGAAGAAGTTGCTA
GCTCTGATGGTCCAAACAAAAGGCAGAAATTGCTCAATGGTGGATACAAT
AAATCATCACAAACTGACACAGCTTGTTCAGTACAATTGGAAGGGTCCCA
TGAGTGTGACAATGATGCAGAATCAGGCTATGCCAATGGCCAGACGCAAA
AGGAGGAAGTAGATTTCATTTTGGGTAACATGCAGTCAAGAAAGGATAAG
ATTCACACGGCTTTGAGAATTCTGCAGGGCATAATTCCTGGTGCTAATGG
AAAGGACCCATTATCGCTTCTCGATGAAGCTATAGACTACTTACAGTCTT
TAAAGCTGAAAGCTGTGGCTCTTGGAGTGTAGCCACGTTTGAGTTGTGCT
CCCTTCTTTGTTTGAGTTGTGCTCCCTTCTTTACATAGTATTAGCTAGCA
GCAGCAGCCGCAGTAGTGGATTGGTGAAAGGGGTCTAAAGAAGGGTGGAA
GGTGTTAACCCACAATTTCTTGGCCTAATTGATTGATGAATTTGAAAACC
ACTGCATTAGCTTTGGATTTGGGGGGTATGGATTTTTTATTTCCTTTCCC
CCGCGCACAACCAATTGTAATACATGGGATCATCCAGACACCAAAAGAAA
ACAAGCTATGGGAAATAGCCCACACTAGTTTCATTCCTCTGCAACCAAAA
AAAAATCATTGCAAATATACATGTCAGGACCCACAACGAACACTCCTTAA
AGCCTTACAGTGAAATCAGTAATCAGAACACCACCCAAACAACAAGAACC
CCAGAGTACGCACGACAAGGAGAGCAATAGACATCAACACACACCACTCG
AAAACATCCACCCCTCATGAAGAAAGACGGCATCTCGGCACCCCACCAAC
AAAAAAAAAGAAGCATAACAGAAAAACTAAGAAAAAAGAAATAGGCAAGC
AAGCACAAACAAGCACAATCAAAAAGCAAAAAGAAGAC
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