EY744942
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744942 vs. ExPASy Swiss-Prot
Match: TBB1_ARATH (Tubulin beta-1 chain OS=Arabidopsis thaliana GN=TUBB1 PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 1.285e-67 Identity = 97/116 (83.62%), Postives = 98/116 (84.48%), Query Frame = 1 Query: 1 PRVRDSIRSRPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 348 P DSIRS PYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNA Sbjct: 71 PGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 186 HSP 2 Score: 50.8322 bits (120), Expect = 1.285e-67 Identity = 23/24 (95.83%), Postives = 24/24 (100.00%), Query Frame = 2 Query: 350 TLSVHQLVENADECMVLDNEALYE 421 TLSVHQLVENADECMVLDNEALY+ Sbjct: 187 TLSVHQLVENADECMVLDNEALYD 210 HSP 3 Score: 48.521 bits (114), Expect = 1.285e-67 Identity = 24/42 (57.14%), Postives = 27/42 (64.29%), Query Frame = 3 Query: 399 LTTKLFMNICFRKSTLSTPSFGDLNHLISATMNRCPSPLEVP 524 L + +ICFR LSTPSFGDLNHLISATM+ L P Sbjct: 203 LDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFP 244
BLAST of EY744942 vs. ExPASy Swiss-Prot
Match: TBB7_ARATH (Tubulin beta-7 chain OS=Arabidopsis thaliana GN=TUBB7 PE=2 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 2.838e-67 Identity = 96/116 (82.76%), Postives = 98/116 (84.48%), Query Frame = 1 Query: 1 PRVRDSIRSRPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 348 P DS+RS PYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA Sbjct: 70 PGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 185 HSP 2 Score: 50.8322 bits (120), Expect = 2.838e-67 Identity = 23/24 (95.83%), Postives = 24/24 (100.00%), Query Frame = 2 Query: 350 TLSVHQLVENADECMVLDNEALYE 421 TLSVHQLVENADECMVLDNEALY+ Sbjct: 186 TLSVHQLVENADECMVLDNEALYD 209 HSP 3 Score: 47.7506 bits (112), Expect = 2.838e-67 Identity = 24/42 (57.14%), Postives = 27/42 (64.29%), Query Frame = 3 Query: 399 LTTKLFMNICFRKSTLSTPSFGDLNHLISATMNRCPSPLEVP 524 L + +ICFR LSTPSFGDLNHLISATM+ L P Sbjct: 202 LDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFP 243
BLAST of EY744942 vs. ExPASy Swiss-Prot
Match: TBB5_ARATH (Tubulin beta-5 chain OS=Arabidopsis thaliana GN=TUBB5 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 3.695e-67 Identity = 96/116 (82.76%), Postives = 98/116 (84.48%), Query Frame = 1 Query: 1 PRVRDSIRSRPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 348 P DSIRS P+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNA Sbjct: 71 PGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 186 HSP 2 Score: 50.8322 bits (120), Expect = 3.695e-67 Identity = 23/24 (95.83%), Postives = 24/24 (100.00%), Query Frame = 2 Query: 350 TLSVHQLVENADECMVLDNEALYE 421 TLSVHQLVENADECMVLDNEALY+ Sbjct: 187 TLSVHQLVENADECMVLDNEALYD 210 HSP 3 Score: 48.521 bits (114), Expect = 3.695e-67 Identity = 24/42 (57.14%), Postives = 27/42 (64.29%), Query Frame = 3 Query: 399 LTTKLFMNICFRKSTLSTPSFGDLNHLISATMNRCPSPLEVP 524 L + +ICFR LSTPSFGDLNHLISATM+ L P Sbjct: 203 LDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFP 244
BLAST of EY744942 vs. ExPASy Swiss-Prot
Match: TBB8_ARATH (Tubulin beta-8 chain OS=Arabidopsis thaliana GN=TUBB8 PE=2 SV=2) HSP 1 Score: 199.134 bits (505), Expect = 1.383e-66 Identity = 95/116 (81.90%), Postives = 98/116 (84.48%), Query Frame = 1 Query: 1 PRVRDSIRSRPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 348 P DS+RS PYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNA Sbjct: 70 PGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 185 HSP 2 Score: 50.8322 bits (120), Expect = 1.383e-66 Identity = 23/24 (95.83%), Postives = 24/24 (100.00%), Query Frame = 2 Query: 350 TLSVHQLVENADECMVLDNEALYE 421 TLSVHQLVENADECMVLDNEALY+ Sbjct: 186 TLSVHQLVENADECMVLDNEALYD 209 HSP 3 Score: 46.595 bits (109), Expect = 1.383e-66 Identity = 23/42 (54.76%), Postives = 27/42 (64.29%), Query Frame = 3 Query: 399 LTTKLFMNICFRKSTLSTPSFGDLNHLISATMNRCPSPLEVP 524 L + +ICFR L+TPSFGDLNHLISATM+ L P Sbjct: 202 LDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFP 243
BLAST of EY744942 vs. ExPASy Swiss-Prot
Match: TBB6_ARATH (Tubulin beta-6 chain OS=Arabidopsis thaliana GN=TUBB6 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.383e-66 Identity = 95/116 (81.90%), Postives = 98/116 (84.48%), Query Frame = 1 Query: 1 PRVRDSIRSRPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 348 P DS+R+ PYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNA Sbjct: 70 PGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 185 HSP 2 Score: 50.8322 bits (120), Expect = 1.383e-66 Identity = 23/24 (95.83%), Postives = 24/24 (100.00%), Query Frame = 2 Query: 350 TLSVHQLVENADECMVLDNEALYE 421 TLSVHQLVENADECMVLDNEALY+ Sbjct: 186 TLSVHQLVENADECMVLDNEALYD 209 HSP 3 Score: 46.595 bits (109), Expect = 1.383e-66 Identity = 23/42 (54.76%), Postives = 27/42 (64.29%), Query Frame = 3 Query: 399 LTTKLFMNICFRKSTLSTPSFGDLNHLISATMNRCPSPLEVP 524 L + +ICFR L+TPSFGDLNHLISATM+ L P Sbjct: 202 LDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFP 243
BLAST of EY744942 vs. ExPASy Swiss-Prot
Match: TBB2_PEA (Tubulin beta-2 chain (Fragment) OS=Pisum sativum GN=TUBB2 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.383e-66 Identity = 95/116 (81.90%), Postives = 98/116 (84.48%), Query Frame = 1 Query: 1 PRVRDSIRSRPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 348 P DS+RS PYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNA Sbjct: 68 PGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 183 HSP 2 Score: 50.8322 bits (120), Expect = 1.383e-66 Identity = 23/24 (95.83%), Postives = 24/24 (100.00%), Query Frame = 2 Query: 350 TLSVHQLVENADECMVLDNEALYE 421 TLSVHQLVENADECMVLDNEALY+ Sbjct: 184 TLSVHQLVENADECMVLDNEALYD 207 HSP 3 Score: 46.595 bits (109), Expect = 1.383e-66 Identity = 23/42 (54.76%), Postives = 27/42 (64.29%), Query Frame = 3 Query: 399 LTTKLFMNICFRKSTLSTPSFGDLNHLISATMNRCPSPLEVP 524 L + +ICFR L+TPSFGDLNHLISATM+ L P Sbjct: 200 LDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFP 241
BLAST of EY744942 vs. ExPASy Swiss-Prot
Match: TBB1_LUPAL (Tubulin beta-1 chain OS=Lupinus albus GN=TUBB1 PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.383e-66 Identity = 95/116 (81.90%), Postives = 98/116 (84.48%), Query Frame = 1 Query: 1 PRVRDSIRSRPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 348 P DS+RS PYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNA Sbjct: 70 PGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 185 HSP 2 Score: 50.8322 bits (120), Expect = 1.383e-66 Identity = 23/24 (95.83%), Postives = 24/24 (100.00%), Query Frame = 2 Query: 350 TLSVHQLVENADECMVLDNEALYE 421 TLSVHQLVENADECMVLDNEALY+ Sbjct: 186 TLSVHQLVENADECMVLDNEALYD 209 HSP 3 Score: 46.595 bits (109), Expect = 1.383e-66 Identity = 23/42 (54.76%), Postives = 27/42 (64.29%), Query Frame = 3 Query: 399 LTTKLFMNICFRKSTLSTPSFGDLNHLISATMNRCPSPLEVP 524 L + +ICFR L+TPSFGDLNHLISATM+ L P Sbjct: 202 LDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFP 243
BLAST of EY744942 vs. ExPASy Swiss-Prot
Match: TBB3_GOSHI (Tubulin beta-3 chain OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.384e-66 Identity = 95/116 (81.90%), Postives = 98/116 (84.48%), Query Frame = 1 Query: 1 PRVRDSIRSRPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 348 P DS+R+ PYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNA Sbjct: 70 PGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 185 HSP 2 Score: 50.8322 bits (120), Expect = 1.384e-66 Identity = 23/24 (95.83%), Postives = 24/24 (100.00%), Query Frame = 2 Query: 350 TLSVHQLVENADECMVLDNEALYE 421 TLSVHQLVENADECMVLDNEALY+ Sbjct: 186 TLSVHQLVENADECMVLDNEALYD 209 HSP 3 Score: 46.595 bits (109), Expect = 1.384e-66 Identity = 23/42 (54.76%), Postives = 27/42 (64.29%), Query Frame = 3 Query: 399 LTTKLFMNICFRKSTLSTPSFGDLNHLISATMNRCPSPLEVP 524 L + +ICFR L+TPSFGDLNHLISATM+ L P Sbjct: 202 LDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFP 243
BLAST of EY744942 vs. ExPASy Swiss-Prot
Match: TBB6_GOSHI (Tubulin beta-6 chain OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 1.801e-66 Identity = 97/116 (83.62%), Postives = 97/116 (83.62%), Query Frame = 1 Query: 1 PRVRDSIRSRPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 348 P DSIRS P GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA Sbjct: 72 PGTMDSIRSGPIGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 187 HSP 2 Score: 50.8322 bits (120), Expect = 1.801e-66 Identity = 23/24 (95.83%), Postives = 24/24 (100.00%), Query Frame = 2 Query: 350 TLSVHQLVENADECMVLDNEALYE 421 TLSVHQLVENADECMVLDNEALY+ Sbjct: 188 TLSVHQLVENADECMVLDNEALYD 211 HSP 3 Score: 46.595 bits (109), Expect = 1.801e-66 Identity = 23/42 (54.76%), Postives = 27/42 (64.29%), Query Frame = 3 Query: 399 LTTKLFMNICFRKSTLSTPSFGDLNHLISATMNRCPSPLEVP 524 L + +ICFR L+TPSFGDLNHLISATM+ L P Sbjct: 204 LDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFP 245
BLAST of EY744942 vs. ExPASy Swiss-Prot
Match: TBB2_ORYSJ (Tubulin beta-2 chain OS=Oryza sativa subsp. japonica GN=TUBB2 PE=2 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 2.346e-66 Identity = 95/116 (81.90%), Postives = 97/116 (83.62%), Query Frame = 1 Query: 1 PRVRDSIRSRPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 348 P DS+RS PYG IFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNA Sbjct: 70 PGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 185 HSP 2 Score: 50.8322 bits (120), Expect = 2.346e-66 Identity = 23/24 (95.83%), Postives = 24/24 (100.00%), Query Frame = 2 Query: 350 TLSVHQLVENADECMVLDNEALYE 421 TLSVHQLVENADECMVLDNEALY+ Sbjct: 186 TLSVHQLVENADECMVLDNEALYD 209 HSP 3 Score: 46.595 bits (109), Expect = 2.346e-66 Identity = 23/42 (54.76%), Postives = 27/42 (64.29%), Query Frame = 3 Query: 399 LTTKLFMNICFRKSTLSTPSFGDLNHLISATMNRCPSPLEVP 524 L + +ICFR L+TPSFGDLNHLISATM+ L P Sbjct: 202 LDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFP 243 The following BLAST results are available for this feature:
BLAST of EY744942 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 408
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744942 ID=EY744942; Name=EY744942; organism=Citrus sinensis; type=EST; length=960bpback to top |