EY744940

Overview
NameEY744940
Unique NameEY744940
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBBA_ARATH (Riboflavin biosynthesis protein ribBA, chloroplastic OS=Arabidopsis thaliana GN=RIBBA PE=2 SV=2)

HSP 1 Score: 275.404 bits (703), Expect = 2.991e-73
Identity = 133/153 (86.93%), Postives = 144/153 (94.12%), Query Frame = 1
Query:   13 EHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTY 471
            EHIAMVKG+IGDGQDILVRVHSECLTGDIFGSARCDCG+QLAL+MQQIEA GRGVLVYLRGHEGRGIGLGHKLRAYNLQD GRDTVEANEELGLPVDSREYGIGAQ++RDLGVRTMKLMTNNP+KYVGLKGYGLA+ G+VP  + + K N+ Y
Sbjct:  361 EHIAMVKGEIGDGQDILVRVHSECLTGDIFGSARCDCGNQLALSMQQIEATGRGVLVYLRGHEGRGIGLGHKLRAYNLQDAGRDTVEANEELGLPVDSREYGIGAQIIRDLGVRTMKLMTNNPAKYVGLKGYGLAIVGRVPLLSLITKENKRY 513          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBBA_NOCFA (Riboflavin biosynthesis protein ribBA OS=Nocardia farcinica GN=ribBA PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.667e-56
Identity = 99/159 (62.26%), Postives = 126/159 (79.25%), Query Frame = 1
Query:   13 EHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTYAHPSPD 489
            EH+A+V+GDIGDG+D+LVRVHSECLTGD+FGS RCDCG QL  A++ ++  GRGV++Y+RGHEGRGIGL HKL+AY LQD GRDTV+AN +LGLP D+R+YG GAQ+L DLG+R+M+L+TNNP+K VGL GYGL +  +VP     +  N  Y     D
Sbjct:  237 EHVALVRGDIGDGEDVLVRVHSECLTGDVFGSLRCDCGPQLDAALEMVDQEGRGVVLYMRGHEGRGIGLMHKLQAYQLQDSGRDTVDANLDLGLPADARDYGTGAQILVDLGIRSMRLLTNNPAKRVGLDGYGLTITERVPMPLRANAENLRYLRTKRD 395          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBBA_SALTO (Riboflavin biosynthesis protein ribBA OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=ribBA PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.402e-56
Identity = 103/159 (64.78%), Postives = 123/159 (77.36%), Query Frame = 1
Query:   13 EHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTYAHPSPD 489
            EH+A+V GD+GDG+D+LVR HSECLTGD+FGS RCDCG QL  AM+ +   GRGV++Y+RGHEGRGIGL HKLRAY LQD GRDTVEAN ELGLPVD+R+YG GAQ+L DLGVR+M+L+TNNP+K  GL+GYGL V  +V      H  N  Y     D
Sbjct:  235 EHVALVMGDLGDGRDVLVRAHSECLTGDVFGSLRCDCGLQLDTAMELVAKEGRGVVLYIRGHEGRGIGLLHKLRAYQLQDKGRDTVEANLELGLPVDARDYGTGAQVLYDLGVRSMRLLTNNPAKRAGLEGYGLTVTERVALPVQSHPENERYLRTKRD 393          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBBA_SALAI (Riboflavin biosynthesis protein ribBA OS=Salinispora arenicola (strain CNS-205) GN=ribBA PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.813e-55
Identity = 101/159 (63.52%), Postives = 124/159 (77.99%), Query Frame = 1
Query:   13 EHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTYAHPSPD 489
            EH+A+V GD+GDG+D+LVRVHSECLTGD+ GS RCDCG QL  A+ Q+   GRGV++Y+RGHEGRGIGL HKL+AY LQD GRDTV+AN +LGLP D+R+YG GAQ+L DLGVR+M+L+TNNP+K  GL+GYGL VAG+V      H  N  Y     D
Sbjct:  235 EHVALVMGDLGDGRDVLVRVHSECLTGDVLGSLRCDCGPQLNAALDQVAREGRGVVLYVRGHEGRGIGLLHKLQAYQLQDTGRDTVDANLDLGLPADARDYGTGAQILYDLGVRSMRLLTNNPAKRAGLEGYGLTVAGRVELPVRPHPENVRYLRTKRD 393          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBBA_RHOE4 (Riboflavin biosynthesis protein ribBA OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=ribBA PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 2.016e-53
Identity = 100/163 (61.35%), Postives = 123/163 (75.46%), Query Frame = 1
Query:   13 EHIAMVKGDI----GDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTYAHPSPD 489
            EH+A+V+GDI    GDG D+LVRVHSECLTGD+FGS RCDCG QL  A+  +   GRGV++Y+RGHEGRGIGL HKL+AY LQD G DTV+AN ELGLP D+R+YGIGAQ+L DLG+ +M+L+TNNP+K VGL GYGL +  +VP     +  N TY     D
Sbjct:  237 EHVALVRGDIAGPDGDGSDVLVRVHSECLTGDVFGSLRCDCGPQLDAALDMVAQEGRGVVLYMRGHEGRGIGLMHKLQAYQLQDAGSDTVDANLELGLPADARDYGIGAQILVDLGISSMRLLTNNPAKRVGLDGYGLQITDRVPMPLRANAENLTYLRTKRD 399          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBBA_BREBN (Riboflavin biosynthesis protein ribBA OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=ribBA PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 3.438e-53
Identity = 102/154 (66.23%), Postives = 124/154 (80.52%), Query Frame = 1
Query:   10 REHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTY 471
            +EH+A++KG+IG  + ILVRVHSECLTGDIFGS RCDCG QL  A++QIEA GRG+L+Y+R  EGRGIGL +KLRAY LQ++G DTVEANE+LG   D R+YGIGAQ+LRDLGV+ M+L+TNNP K  GL GYGLAV  +VP  TP H  N+ Y
Sbjct:  231 KEHVALIKGEIGPDEPILVRVHSECLTGDIFGSYRCDCGPQLHAALEQIEANGRGILLYMR-QEGRGIGLINKLRAYKLQEEGLDTVEANEKLGFAADLRDYGIGAQILRDLGVQRMRLLTNNPRKIRGLTGYGLAVEERVPLQTPEHLHNKQY 383          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBBA_MYCA9 (Riboflavin biosynthesis protein ribBA OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=ribBA PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.911e-52
Identity = 98/163 (60.12%), Postives = 123/163 (75.46%), Query Frame = 1
Query:   13 EHIAMVKGDI----GDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTYAHPSPD 489
            EH+A+V GDI    GDG D+LVRVHSECLTGD+FGS RCDCG QL  AM+ +   GRG+++Y+RGHEGRGIGL HKL+AY LQD G DTV+AN +LGLP D+R+YG+GAQ+L DLGV++M+L+TNNP+K VGL GYGL +  +VP     +  N  Y     D
Sbjct:  237 EHVALVLGDISGPDGDGNDVLVRVHSECLTGDVFGSRRCDCGPQLDAAMEMVAKEGRGIVLYMRGHEGRGIGLMHKLQAYQLQDAGEDTVDANLKLGLPADARDYGLGAQILVDLGVKSMRLLTNNPAKRVGLDGYGLHIIERVPLPVRANSENIRYLRTKRD 399          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBBA_RHOSR (Riboflavin biosynthesis protein ribBA OS=Rhodococcus sp. (strain RHA1) GN=ribBA PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.801e-52
Identity = 98/163 (60.12%), Postives = 122/163 (74.85%), Query Frame = 1
Query:   13 EHIAMVKGDI----GDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTYAHPSPD 489
            EH+A+V+GD+    GDG D+LVRVHSECLTGD+FGS RCDCG QL  A+  +   GRGV++Y+RGHEGRGIGL HKL+AY LQD G DTV+AN ELGLP D+R+YGIGAQ+L DLG+ +M+L+TNNP+K VGL GYGL +  +V      +  N TY     D
Sbjct:  237 EHVALVRGDLPGPDGDGSDVLVRVHSECLTGDVFGSLRCDCGPQLDAALDMVAQEGRGVVLYMRGHEGRGIGLMHKLQAYQLQDAGSDTVDANLELGLPADARDYGIGAQILVDLGISSMRLLTNNPAKRVGLDGYGLQITERVSMPLRANAENLTYLRTKRD 399          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBBA_BACWK (Riboflavin biosynthesis protein ribBA OS=Bacillus weihenstephanensis (strain KBAB4) GN=ribBA PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.801e-52
Identity = 97/155 (62.58%), Postives = 124/155 (80.00%), Query Frame = 1
Query:    7 VREHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTY 471
            ++EHIA+VKGDI  G+ +LVRVHSECLTGD+FGS RCDCG QL  A+ QIE  G+GVL+Y+R  EGRGIGL +KLRAY LQ++G DTVEANE+LG P D R+YGIGAQ+L+DLG+++++L+TNNP K  GL+GY L V  +VP   P  + N+TY
Sbjct:  230 MKEHIALVKGDISTGEPVLVRVHSECLTGDVFGSCRCDCGPQLHAALAQIEREGKGVLLYMR-QEGRGIGLLNKLRAYKLQEEGLDTVEANEKLGFPADLRDYGIGAQILKDLGLQSLRLLTNNPRKIAGLQGYDLEVTERVPLQMPTKEENKTY 383          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBBA_MYCGI (Riboflavin biosynthesis protein ribBA OS=Mycobacterium gilvum (strain PYR-GCK) GN=ribBA PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.469e-52
Identity = 96/145 (66.21%), Postives = 118/145 (81.38%), Query Frame = 1
Query:   13 EHIAMVKGDI----GDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVP 435
            EH+A+VKGDI    GDG D+LVRVHSECLTGD+FGS RCDCG QL  A+  +   GRG+++Y+RGHEGRGIGL HKL+AY LQD G DTV+AN +LGLP D+R+YG GAQ+L DLGVR+M+L+TNNP+K VGL GYGL +  +VP
Sbjct:  237 EHVALVKGDIAGPHGDGHDVLVRVHSECLTGDVFGSRRCDCGPQLDAALAMVAREGRGIVLYMRGHEGRGIGLMHKLQAYQLQDAGDDTVDANLKLGLPADARDYGTGAQILVDLGVRSMRLLTNNPAKRVGLDGYGLHIIERVP 381          
The following BLAST results are available for this feature:
BLAST of EY744940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
RIBBA_ARATH2.991e-7386.93Riboflavin biosynthesis protein ribBA, chloroplast... [more]
RIBBA_NOCFA5.667e-5662.26Riboflavin biosynthesis protein ribBA OS=Nocardia ... [more]
RIBBA_SALTO7.402e-5664.78Riboflavin biosynthesis protein ribBA OS=Salinispo... [more]
RIBBA_SALAI2.813e-5563.52Riboflavin biosynthesis protein ribBA OS=Salinispo... [more]
RIBBA_RHOE42.016e-5361.35Riboflavin biosynthesis protein ribBA OS=Rhodococc... [more]
RIBBA_BREBN3.438e-5366.23Riboflavin biosynthesis protein ribBA OS=Brevibaci... [more]
RIBBA_MYCA92.911e-5260.12Riboflavin biosynthesis protein ribBA OS=Mycobacte... [more]
RIBBA_RHOSR3.801e-5260.12Riboflavin biosynthesis protein ribBA OS=Rhodococc... [more]
RIBBA_BACWK3.801e-5262.58Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBBA_MYCGI8.469e-5266.21Riboflavin biosynthesis protein ribBA OS=Mycobacte... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-006-B11-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744940 ID=EY744940; Name=EY744940; organism=Citrus sinensis; type=EST; length=883bp
CCACGCGTCCGTGAGCATATAGCAATGGTTAAGGGTGACATTGGGGATGG
ACAAGATATTCTTGTGAGAGTGCACTCAGAGTGTCTCACTGGAGATATAT
TTGGATCAGCCAGATGTGATTGTGGTGATCAGCTTGCACTTGCAATGCAG
CAGATTGAGGCTGCTGGCAGGGGTGTATTAGTTTATCTCCGTGGTCATGA
GGGAAGGGGCATTGGTTTAGGCCACAAGCTTCGCGCTTATAACTTGCAGG
ACGATGGGCGTGATACAGTTGAAGCAAATGAGGAATTGGGATTGCCTGTT
GACTCACGGGAATATGGCATTGGTGCACAGATGCTAAGGGATCTTGGTGT
TCGAACAATGAAGCTGATGACAAACAACCCTTCCAAGTATGTTGGACTCA
AGGGTTATGGTTTGGCTGTGGCAGGAAAGGTTCCCCCAAACACTCCCCTT
CACAAGGCAAACAGGACATATGCCCACCCCAGCCCTGATCCATGCGCCAC
TTCATGCGTTCAGAATCCCCGGGGCCGCGTAGCACCATCCTCCAAGCCAG
GCAACGACAAAAAGAAGAACAAAGCCTCAAAGAGCACGCCTACGACAAAA
AAACAGGAATCATCGATGAGGTCAAGCTCAGCAACCAACACCCATAACCA
CCAAGAACCCAACAAACCCGGCCAGCCGCAGCCCCGCCCAACAACCCTAC
ACCATGCCCCTACCCACCCGACCACACGCGCGAGACCCCCAACGGCCATC
ACACCATCCAGCCCAGCGTCAGCCAACCCACACGAGGCCAGCTACGGAGC
CCCCCATACCACTCCCCACACCCACCAGACAAAGTAGCCGCAAAACACCA
TGTAACACACACGGCCTAGGCAACCAAGGCCAC
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