FC922536
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC922536 vs. ExPASy Swiss-Prot
Match: SCL34_ARATH (Scarecrow-like protein 34 OS=Arabidopsis thaliana GN=SCL34 PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 1.588e-45 Identity = 76/111 (68.47%), Postives = 93/111 (83.78%), Query Frame = -1 Query: 422 LFDMFDTTIPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAW-YHKDFVIDQDNNWMLQGWKGRIVFASSCWVPA 751 LFDMFD+T+PR++ ER+ FERE YGREAMNVIACE +RVERPETY+QWQ R +RAGFKQ + EL+E GKLK W YHKDFV+D+++ W+LQGWKGR ++ASSCWVPA Sbjct: 520 LFDMFDSTLPRDNKERIRFEREFYGREAMNVIACEEADRVERPETYRQWQVRMVRAGFKQKTIKPELVELFRGKLKKWRYHKDFVVDENSKWLLQGWKGRTLYASSCWVPA 630 HSP 2 Score: 31.9574 bits (71), Expect = 1.588e-45 Identity = 10/17 (58.82%), Postives = 17/17 (100.00%), Query Frame = -3 Query: 753 APFFVTRFREAIFHFSS 803 APFF++RF+EA++H+S+ Sbjct: 503 APFFISRFKEAVYHYSA 519
BLAST of FC922536 vs. ExPASy Swiss-Prot
Match: SCL33_ARATH (Scarecrow-like protein 33 OS=Arabidopsis thaliana GN=SCL33 PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 2.630e-42 Identity = 72/110 (65.45%), Postives = 91/110 (82.73%), Query Frame = -1 Query: 425 LFDMFDTTIPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYH-KDFVIDQDNNWMLQGWKGRIVFASSCWVP 751 LFDM DT + REDP R+MFE+E YGRE MNV+ACEG ERVERPE+YKQWQAR +RAGF+Q+PL +EL++KL +++ Y K+F +DQD +W+LQGWKGRIV+ SS WVP Sbjct: 584 LFDMCDTNLTREDPMRVMFEKEFYGREIMNVVACEGTERVERPESYKQWQARAMRAGFRQIPLEKELVQKLKLMVESGYKPKEFDVDQDCHWLLQGWKGRIVYGSSIWVP 693 HSP 2 Score: 35.4242 bits (80), Expect = 2.630e-42 Identity = 14/17 (82.35%), Postives = 16/17 (94.12%), Query Frame = -3 Query: 753 APFFVTRFREAIFHFSS 803 APFFVTRFRE +FH+SS Sbjct: 567 APFFVTRFREVLFHYSS 583
BLAST of FC922536 vs. ExPASy Swiss-Prot
Match: SCL31_ARATH (Scarecrow-like protein 31 OS=Arabidopsis thaliana GN=SCL31 PE=2 SV=2) HSP 1 Score: 172.17 bits (435), Expect = 3.078e-42 Identity = 78/126 (61.90%), Postives = 97/126 (76.98%), Query Frame = -1 Query: 422 FLSQDFVKQSFTSLPLFDMFDTTIPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAW-YHKDFVIDQDNNWMLQGWKGRIVFASSCWVPA 796 F + F + F LFD+F T+ +E+PER+ FE E YGRE MNVIACEG++RVERPETYKQWQ R IRAGFKQ P+ EL++ K+K W YHKDFV+D+D+NW LQGWKGRI+F+SSCWVP+ Sbjct: 537 FFTTRFKEALFHYSALFDLFGATLSKENPERIHFEGEFYGREVMNVIACEGVDRVERPETYKQWQVRMIRAGFKQKPVEAELVQLFREKMKKWGYHKDFVLDEDSNWFLQGWKGRILFSSSCWVPS 662
BLAST of FC922536 vs. ExPASy Swiss-Prot
Match: SCL14_ARATH (Scarecrow-like protein 14 OS=Arabidopsis thaliana GN=SCL14 PE=2 SV=2) HSP 1 Score: 162.155 bits (409), Expect = 3.186e-39 Identity = 76/125 (60.80%), Postives = 95/125 (76.00%), Query Frame = -1 Query: 422 FLSQDFVKQSFTSLPLFDMFDTTIPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKDFVIDQDNNWMLQGWKGRIVFASSCWVPA 796 F F + F +FDM D+ + RED RLM+E+E YGRE +NV+ACEG ERVERPETYKQWQAR IRAGF+QLPL +ELM+ L K++ Y K+F +DQ+ NW+LQGWKGRIV+ASS WVP+ Sbjct: 643 FFVTRFREALFHYSAVFDMCDSKLAREDEMRLMYEKEFYGREIVNVVACEGTERVERPETYKQWQARLIRAGFRQLPLEKELMQNLKLKIENGYDKNFDVDQNGNWLLQGWKGRIVYASSLWVPS 767
BLAST of FC922536 vs. ExPASy Swiss-Prot
Match: SCL9_ARATH (Scarecrow-like protein 9 OS=Arabidopsis thaliana GN=SCL9 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 8.675e-37 Identity = 70/124 (56.45%), Postives = 87/124 (70.16%), Query Frame = -1 Query: 425 FLSQDFVKQSFTSLPLFDMFDTTIPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKDFVIDQDNNWMLQGWKGRIVFASSCWVP 796 F F + F +FDM +T +PRED ER+ E EV+GREA+NVIACEG ERVERPETYKQW R +R+G Q+P + +M+ + K+ +YHKDFVIDQDN W+LQGWKGR V A S W P Sbjct: 591 FFVTRFREALFHFSSIFDMLETIVPREDEERMFLEMEVFGREALNVIACEGWERVERPETYKQWHVRAMRSGLVQVPFDPSIMKTSLHKVHTFYHKDFVIDQDNRWLLQGWKGRTVMALSVWKP 714
BLAST of FC922536 vs. ExPASy Swiss-Prot
Match: SCL11_ARATH (Scarecrow-like protein 11 OS=Arabidopsis thaliana GN=SCL11 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.874e-34 Identity = 68/127 (53.54%), Postives = 89/127 (70.08%), Query Frame = -1 Query: 422 FLSQDFVKQSFTSLPLFDMFDTTIPREDP--ERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKDFVIDQDNNWMLQGWKGRIVFASSCWVPA 796 F F + F LFDMFDTTI ED R + ERE+ R+AM+VI+CEG ER RPETYKQW+ R +RAGFK +++++M++ ++ YH+DFVID DNNWMLQGWKGR+++A SCW PA Sbjct: 474 FFMTRFREALFHYSSLFDMFDTTIHAEDEYKNRSLLERELLVRDAMSVISCEGAERFARPETYKQWRVRILRAGFKPATISKQIMKEAKEIVRKRYHRDFVIDSDNNWMLQGWKGRVIYAFSCWKPA 600
BLAST of FC922536 vs. ExPASy Swiss-Prot
Match: SCL30_ARATH (Scarecrow-like protein 30 OS=Arabidopsis thaliana GN=SCL30 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.693e-32 Identity = 65/125 (52.00%), Postives = 87/125 (69.60%), Query Frame = -1 Query: 422 FLSQDFVKQSFTSLPLFDMFDTTIPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKDFVIDQDNNWMLQGWKGRIVFASSCWVPA 796 F F + F LFDM++TT+ +D R + ERE+ R+AM+VIACEG ER RPETYKQWQ R +RAGF+ L++++++ +K YHKDFVID DN+WM QGWKGR+++A SCW PA Sbjct: 457 FFLTRFREALFHCSSLFDMYETTLSEDDNCRTLVERELIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFRPAKLSKQIVKDGKEIVKERYHKDFVIDNDNHWMFQGWKGRVLYAVSCWKPA 581
BLAST of FC922536 vs. ExPASy Swiss-Prot
Match: CIGR1_ORYSJ (Chitin-inducible gibberellin-responsive protein 1 OS=Oryza sativa subsp. japonica GN=CIGR1 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.440e-15 Identity = 37/107 (34.58%), Postives = 65/107 (60.75%), Query Frame = -1 Query: 431 LFDMFDTTIPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKDFVIDQDNNWMLQGWKGRIVFASSCW 751 +F+ D +PR++ ER+ E+ ++ +N+IACEG +RVER E +W++R AGF+ PL+ + ++ KL A Y + +D+ + ML GW+ R + ++S W Sbjct: 465 MFESIDANLPRDNKERISVEQHCLAKDIVNIIACEGKDRVERHELLGKWKSRLTMAGFRPYPLS-SYVNSVIRKLLACYSDKYTLDEKDGAMLLGWRSRKLISASAW 570
BLAST of FC922536 vs. ExPASy Swiss-Prot
Match: CIGR2_ORYSJ (Chitin-inducible gibberellin-responsive protein 2 OS=Oryza sativa subsp. japonica GN=CIGR2 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.219e-14 Identity = 40/107 (37.38%), Postives = 62/107 (57.94%), Query Frame = -1 Query: 431 LFDMFDTTIPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKDFVIDQDNNWMLQGWKGRIVFASSCW 751 +F+ D T+PR+D ER+ E+ RE +N+IACEG ER ER E + +W+AR AGF+ PL+ L+ + L Y ++ + + + + GWK R + SS W Sbjct: 438 IFESIDLTLPRDDRERINMEQHCLAREIVNLIACEGEERAERYEPFGKWKARLTMAGFRPSPLS-SLVNATIRTLLQSYSDNYKLAERDGALYLGWKSRPLVVSSAW 543
BLAST of FC922536 vs. ExPASy Swiss-Prot
Match: SCL8_ARATH (Scarecrow-like protein 8 OS=Arabidopsis thaliana GN=SCL8 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.348e-13 Identity = 34/107 (31.78%), Postives = 63/107 (58.88%), Query Frame = -1 Query: 431 LFDMFDTTIPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKDFVIDQDNNWMLQGWKGRIVFASSCW 751 L + ++T+P + +R E + GR+ +N +ACEG++R+ER E + +W+ R AGF+ +PL++++ E + + H F + +DN + GW GR + +S W Sbjct: 535 LLESVESTVPSTNSDRAKVEEGI-GRKLVNAVACEGIDRIERCEVFGKWRMRMSMAGFELMPLSEKIAESMKSRGNR-VHPGFTVKEDNGGVCFGWMGRALTVASAW 639 The following BLAST results are available for this feature:
BLAST of FC922536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC922536 ID=FC922536; Name=FC922536; organism=Citrus sinensis; type=EST; length=805bpback to top |