EY680371

Overview
NameEY680371
Unique NameEY680371
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY680371 vs. ExPASy Swiss-Prot
Match: SF3A1_ARATH (Probable splicing factor 3 subunit 1 OS=Arabidopsis thaliana GN=At1g14650 PE=1 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 3.998e-30
Identity = 64/70 (91.43%), Postives = 68/70 (97.14%), Query Frame = 1 
Query:    7 SALAQDDEISRNIVGLARLRPDIFGTTEEEVSNAVKAEIEKKKDEQPKQVIWDGHTSSIGRTANQAMSQN 216
            + LAQDDEI++NIVGLARLRPDIFGTTEEEVSNAVKAEIEKKKDEQPKQVIWDGHT SIGRTANQA+SQN
Sbjct:  453 TTLAQDDEIAKNIVGLARLRPDIFGTTEEEVSNAVKAEIEKKKDEQPKQVIWDGHTGSIGRTANQALSQN 522
The following BLAST results are available for this feature:
BLAST of EY680371 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SF3A1_ARATH3.998e-3091.43Probable splicing factor 3 subunit 1 OS=Arabidopsi... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-010-D04-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680371 ID=EY680371; Name=EY680371; organism=Citrus sinensis; type=EST; length=870bp
CCCGCGTCCGCTCTTGCTCAGGATGATGAGATTTCCAGAAATATTGTTGG
GCTTGCACGTTTACGGCCTGATATCTTTGGTACCACAGAGGAAGAAGTTT
CTAATGCAGTCAAAGCAGAGATTGAGAAGAAGAAAGATGAGCAACCAAAG
CAAGTCATATGGGATGGTCATACTAGTAGCATTGGGCGTACAGCAAACCA
AGCCATGTCTCAAAATATTAATGGAGATGATCAAAACAGTGCAGCTAACA
GCGATTCCTCGAATCTACCCGGTCCAGCAGCTCCTCCTCCTCGACCTGGT
GTGCCTTCTTTGCGTCCTCTTCCCCCACCACCGGGACTAGCCTTGAATCT
TCCTCGTGTGCCTCCAAACACAGTCCAGTATTCAACACCCACTAGTGGTG
GGATCCCAGTTCCTCAACAGAGGCAGTTCACTATGCAAGGGATTCCATCA
ATGCCCCCAAACCCTCCTTCAATGCCTATAGGTGGACAGCCACCTGTTAT
GATGAGTCGACCACCCCCAATGCCACCATCGATTTCCATGAATCCATCTG
GTGTGCATGTCCCACCGCCTCCTGGATCTCAGTTTACTCATATGCAAGTT
CCGCAACATTTTGCCCATCTCCCGGGGCCCTGCACCACCTCCTGTGACTA
TGATGCAGCCACCACCTTTTGCCTCATGGGATGCCTCCTCCACCTCCAAC
TGAAGCTCCGCCGCCCTTCCCCGAAGAGCCGGACCCAAAAAGGCAGAAGC
TTGGAGAATTCTTGCTTAATTCCTGAAAATTAATTTTCGGGCCCAGCTTC
CGGGGACCTGGTTCCGGTCCCGGGGGGGGGTTCCCAATGGGTGAGAGAAG
GAAAATCGGAAAGGGGCCAC
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