EY680303
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680303 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 269.24 bits (687), Expect = 1.975e-71 Identity = 144/242 (59.50%), Postives = 160/242 (66.12%), Query Frame = 3
Query: 87 IGVKEMLGNPLNVSSAVRTSAPGASNPSTFKPVALFXXXXXXXXXXXXXXXXXXXNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGE*DCPSSSLQGLRXXXXXXXXXXXXXXXXT**ILLL*CSYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLPDGNTLNYFRKNIPINLVFAVIAENVLVGGGEY*KNPNGLGFEGKPSPRG 812
+GV EMLG PLN + R+SAP AS+PSTFK VALF ++ELAKWYGPDRRIFLP+GLLDRSEIPEYL GEV G+ YGYDPFGL KKP++F+KYQA+ELIHARWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALL DGNTLNYF KNIPINLV AV+AE VL+GG EY + NGL FE K P G
Sbjct: 4 LGVSEMLGTPLNFRAVSRSSAPLASSPSTFKTVALFSKKKPAPAKSKAVSET---SDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGD--------------------------------------YGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGG 204
BLAST of EY680303 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.036e-17 Identity = 59/178 (33.15%), Postives = 80/178 (44.94%), Query Frame = 3
Query: 267 KWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGE*DCPSSSLQGLRXXXXXXXXXXXXXXXXT**ILLL*CSYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLPDGNTLNYFRKNIPI---NLVFAVIAENVLVGGGE-Y*KNPNGLGF 788
++YGPDR FL G ++ PEYLTGE PG+ YG+D GLS P F++Y+ ELIHARWA+LGA G + PE +++ E VWFK GA + LNY I +++ + + VL+G E Y N GF
Sbjct: 32 EFYGPDRAKFL--GPFSENDTPEYLTGEFPGD--------------------------------------YGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRANGGSEGF 169 HSP 2 Score: 25.409 bits (54), Expect = 1.036e-17 Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 1
Query: 793 ENLPPGGPFEPLG 831
+ L PGGPF+PLG
Sbjct: 174 DTLYPGGPFDPLG 186
BLAST of EY680303 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 9.445e-15 Identity = 50/139 (35.97%), Postives = 63/139 (45.32%), Query Frame = 3
Query: 270 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGE*DCPSSSLQGLRXXXXXXXXXXXXXXXXT**ILLL*CSYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLPDGNTLNY 686
WYGPDR ++L E P YLTGE PG+ YG+D GLS P++F+K + E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y
Sbjct: 58 WYGPDRVLYLGPF---SGEPPSYLTGEFPGD--------------------------------------YGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDY 154 HSP 2 Score: 21.557 bits (44), Expect = 9.445e-15 Identity = 7/16 (43.75%), Postives = 12/16 (75.00%), Query Frame = 1
Query: 784 DLKENLPPGGPFEPLG 831
++ + + PGG F+PLG
Sbjct: 192 EVTDPIYPGGSFDPLG 207
BLAST of EY680303 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 9.452e-15 Identity = 54/163 (33.13%), Postives = 72/163 (44.17%), Query Frame = 3
Query: 270 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGE*DCPSSSLQGLRXXXXXXXXXXXXXXXXT**ILLL*CSYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLPDGNTLNYFRKN--IPINLVFAVIAENVLVGG 752
WYGPDR +L E P YLTGE PG+ YG+D GLS P+ FSK + E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y + + A+ A V++ G
Sbjct: 52 WYGPDRVKYLGPF---SGESPSYLTGEFPGD--------------------------------------YGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMG 172 HSP 2 Score: 21.9422 bits (45), Expect = 9.452e-15 Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 1
Query: 784 DLKENLPPGGPFEPLG 831
++ + L PGG F+PLG
Sbjct: 186 EVVDPLYPGGSFDPLG 201
BLAST of EY680303 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 9.452e-15 Identity = 54/163 (33.13%), Postives = 72/163 (44.17%), Query Frame = 3
Query: 270 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGE*DCPSSSLQGLRXXXXXXXXXXXXXXXXT**ILLL*CSYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLPDGNTLNYFRKN--IPINLVFAVIAENVLVGG 752
WYGPDR +L E P YLTGE PG+ YG+D GLS P+ FSK + E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y + + A+ A V++ G
Sbjct: 53 WYGPDRVKYLGPF---SGESPSYLTGEFPGD--------------------------------------YGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMG 173 HSP 2 Score: 21.9422 bits (45), Expect = 9.452e-15 Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 1
Query: 784 DLKENLPPGGPFEPLG 831
++ + L PGG F+PLG
Sbjct: 187 EVVDPLYPGGSFDPLG 202
BLAST of EY680303 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 9.455e-15 Identity = 51/139 (36.69%), Postives = 65/139 (46.76%), Query Frame = 3
Query: 270 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGE*DCPSSSLQGLRXXXXXXXXXXXXXXXXT**ILLL*CSYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLPDGNTLNY 686
WYGPDR ++L G L E P YLTGE PG+ YG+D GLS P+ F+K + E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y
Sbjct: 49 WYGPDRVLYL--GPLS-GEPPSYLTGEFPGD--------------------------------------YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDY 145 HSP 2 Score: 21.9422 bits (45), Expect = 9.455e-15 Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 1
Query: 784 DLKENLPPGGPFEPLG 831
++ + L PGG F+PLG
Sbjct: 183 EVVDPLYPGGTFDPLG 198
BLAST of EY680303 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.459e-15 Identity = 63/193 (32.64%), Postives = 81/193 (41.97%), Query Frame = 3
Query: 270 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGE*DCPSSSLQGLRXXXXXXXXXXXXXXXXT**ILLL*CSYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLPDGNTLNYF-RKNI----------PINLVFAVIAENVLVGGGEY*KNPNGLGFEGKPSPRGA 815
WYGPDR +L + P YLTGE PG+ YG+D GLS P+ F++ + E+IH+RWAMLGA G + PE +K G G EAVWFK GA + L+Y N+ + +V E VGGG P G G + K P GA
Sbjct: 47 WYGPDRPKYLGPF---SEQTPSYLTGEFPGD--------------------------------------YGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGG-----PLGEGLD-KVYPGGA 191 HSP 2 Score: 21.1718 bits (43), Expect = 9.459e-15 Identity = 7/9 (77.78%), Postives = 8/9 (88.89%), Query Frame = 1
Query: 805 PGGPFEPLG 831
PGG F+PLG
Sbjct: 188 PGGAFDPLG 196
BLAST of EY680303 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.459e-15 Identity = 63/193 (32.64%), Postives = 81/193 (41.97%), Query Frame = 3
Query: 270 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGE*DCPSSSLQGLRXXXXXXXXXXXXXXXXT**ILLL*CSYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLPDGNTLNYF-RKNI----------PINLVFAVIAENVLVGGGEY*KNPNGLGFEGKPSPRGA 815
WYGPDR +L + P YLTGE PG+ YG+D GLS P+ F++ + E+IH+RWAMLGA G + PE +K G G EAVWFK GA + L+Y N+ + +V E VGGG P G G + K P GA
Sbjct: 47 WYGPDRPKYLGPF---SEQTPSYLTGEFPGD--------------------------------------YGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGG-----PLGEGLD-KVYPGGA 191 HSP 2 Score: 21.1718 bits (43), Expect = 9.459e-15 Identity = 7/9 (77.78%), Postives = 8/9 (88.89%), Query Frame = 1
Query: 805 PGGPFEPLG 831
PGG F+PLG
Sbjct: 188 PGGAFDPLG 196
BLAST of EY680303 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.229e-14 Identity = 51/139 (36.69%), Postives = 64/139 (46.04%), Query Frame = 3
Query: 270 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGE*DCPSSSLQGLRXXXXXXXXXXXXXXXXT**ILLL*CSYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLPDGNTLNY 686
WYGPDR ++L G L E P YLTGE PG+ YG+D GLS P+ F+K + E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y
Sbjct: 49 WYGPDRVLYL--GPLS-GEPPSYLTGEFPGD--------------------------------------YGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDY 145 HSP 2 Score: 21.9422 bits (45), Expect = 1.229e-14 Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 1
Query: 784 DLKENLPPGGPFEPLG 831
++ + L PGG F+PLG
Sbjct: 183 EVVDPLYPGGSFDPLG 198
BLAST of EY680303 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.594e-14 Identity = 50/139 (35.97%), Postives = 63/139 (45.32%), Query Frame = 3
Query: 270 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGE*DCPSSSLQGLRXXXXXXXXXXXXXXXXT**ILLL*CSYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLPDGNTLNY 686
WYGPDR ++L E P YLTGE PG+ YG+D GLS P+ F+K + E+IH+RWAMLGA G + PE + G G EAVWFK GA + L+Y
Sbjct: 62 WYGPDRVLYLGPF---SGEPPSYLTGEFPGD--------------------------------------YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDY 158 HSP 2 Score: 21.1718 bits (43), Expect = 1.594e-14 Identity = 7/16 (43.75%), Postives = 12/16 (75.00%), Query Frame = 1
Query: 784 DLKENLPPGGPFEPLG 831
++ + + PGG F+PLG
Sbjct: 196 EVTDPIYPGGNFDPLG 211 The following BLAST results are available for this feature:
BLAST of EY680303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >EY680303 ID=EY680303; Name=EY680303; organism=Citrus sinensis; type=EST; length=843bpback to top |