EY680176

Overview
NameEY680176
Unique NameEY680176
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680176 vs. ExPASy Swiss-Prot
Match: DCE1_ARATH (Glutamate decarboxylase 1 OS=Arabidopsis thaliana GN=GAD1 PE=1 SV=2)

HSP 1 Score: 432.95 bits (1112), Expect = 1.115e-120
Identity = 222/282 (78.72%), Postives = 238/282 (84.40%), Query Frame = 2
Query:   17 IIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKEDLPEELIFHINYLRADHPTFPPHFPKGSSPRNCSVTTN*SP*VL---KGYRIGMENCPKNAWGLKKGQKKTRPPSKFVAKGTKGFPLGGF 853
            +IA LFNAPLE++ETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKP DKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDP +AV+MVDENTICVAAILGSTLNGEFEDVKLLNDLL EKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWV+WRNKEDLPEELIFHINYL AD PTF  +F KGSS     V       +    +GYR  MENC +N   L++G +KT   +  +    +G PL  F
Sbjct:  103 MIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPQQAVDMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSS----QVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFN--IVSKDEGVPLVAF 378          
BLAST of EY680176 vs. ExPASy Swiss-Prot
Match: DCE_PETHY (Glutamate decarboxylase OS=Petunia hybrida GN=GAD PE=1 SV=1)

HSP 1 Score: 428.713 bits (1101), Expect = 2.102e-119
Identity = 216/263 (82.13%), Postives = 229/263 (87.07%), Query Frame = 2
Query:   17 IIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKEDLPEELIFHINYLRADHPTFPPHFPKGSSPRNCSVTTN*SP*V---LKGYRIGMENCPKNAWGLKKGQKKT 796
            +IA LFNAPLED ETAVGVGTVGSSEAIMLAGLAFKRKWQNK KA+GKP DKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDP KAVEMVDENTICVAAILGSTLNGEFEDVK LNDLL EKNKETGWDTPIHVDAASGGFIAPF+YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNK+DLP+ELIFHINYL AD PTF  +F KGSS     V       +    +GY+  MENC +NA  L++G +KT
Sbjct:  103 MIAHLFNAPLEDGETAVGVGTVGSSEAIMLAGLAFKRKWQNKMKAQGKPCDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPEKAVEMVDENTICVAAILGSTLNGEFEDVKRLNDLLVEKNKETGWDTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKDDLPDELIFHINYLGADQPTFTLNFSKGSS----QVIAQYYQLIRLGYEGYKNVMENCQENASVLREGLEKT 361          
BLAST of EY680176 vs. ExPASy Swiss-Prot
Match: DCE2_ARATH (Glutamate decarboxylase 2 OS=Arabidopsis thaliana GN=GAD2 PE=1 SV=1)

HSP 1 Score: 423.32 bits (1087), Expect = 8.832e-118
Identity = 214/260 (82.31%), Postives = 228/260 (87.69%), Query Frame = 2
Query:   17 IIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKEDLPEELIFHINYLRADHPTFPPHFPKGSSPRNCSVTTN*SP*VLKGYRIGMENCPKNAWGLKKGQKKT 796
            IIARLFNAPLE+SETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKP+DKPNIVTGANVQVCWEKFARYFEVELKEV LSEGYYVMDP KA EMVDENTICVAAILGSTLNGEFEDVK LNDLL +KN+ETGW+TPIHVDAASGGFIAPF+YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWR  EDLPEELIFHINYL AD PTF  +F KGSS +  +          +GY+  MENC +N   LK+G +KT
Sbjct:  102 IIARLFNAPLEESETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVNLSEGYYVMDPDKAAEMVDENTICVAAILGSTLNGEFEDVKRLNDLLVKKNEETGWNTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRAAEDLPEELIFHINYLGADQPTFTLNFSKGSS-QIIAQYYQLIRLGFEGYKNVMENCIENMVVLKEGIEKT 360          
BLAST of EY680176 vs. ExPASy Swiss-Prot
Match: DCE_SOLLC (Glutamate decarboxylase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 408.297 bits (1048), Expect = 2.940e-113
Identity = 202/259 (77.99%), Postives = 226/259 (87.26%), Query Frame = 2
Query:   17 IIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKEDLPEELIFHINYLRADHPTFPPHFPKGSSPRNCSVTTN*SP*VLKGYRIGMENCPKNAWGLKKGQKK 793
            ++A LF+AP+ D ETAVGVGTVGSSEAIMLAGLAFKRKWQ+KRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKL EGYYVMDPAKAVE+VDENTICVAAILGSTL GEFEDVKLLN+LLT+KNKETGW+TPIHVDAASGGFIAPFL+P+LEWDFRLPLVKSINVSGHKYGLVYAG+GWV+WR+KEDLP+EL+FHINYL +D PTF  +F KGS  +  +          +GY+  M+NC  NA  L +G  K
Sbjct:  104 MLAHLFHAPVGDDETAVGVGTVGSSEAIMLAGLAFKRKWQSKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLKEGYYVMDPAKAVEIVDENTICVAAILGSTLTGEFEDVKLLNELLTKKNKETGWETPIHVDAASGGFIAPFLWPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRSKEDLPDELVFHINYLGSDQPTFTLNFSKGSY-QIIAQYYQLIRLGFEGYKNVMKNCLSNAKVLTEGITK 361          
BLAST of EY680176 vs. ExPASy Swiss-Prot
Match: GADA_DICDI (Glutamate decarboxylase A OS=Dictyostelium discoideum GN=gadA PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.210e-66
Identity = 124/218 (56.88%), Postives = 159/218 (72.94%), Query Frame = 2
Query:   17 IIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKEDLPEELIFHINYLRADHPTFPPHFPK 670
            I+A L+N+P E SET +G  T GSSEA ML G+A K +W+  RK +GKPFDKPNIVTG  VQ+CW KFA YF++EL+EV +    Y+M P +A++  DENTI V   LG T   ++EDVK +++ L +  KETG D PIHVDAASGGF+APFL PE+ WDFRLP VKSIN SGHK+GL   G+GWVVWR K D+ ++L+F +NYL  + PTF  +F +
Sbjct:  103 ILADLWNSP-ESSET-IGCSTTGSSEAAMLGGMALKWRWRENRKKQGKPFDKPNIVTGP-VQICWHKFALYFDIELREVPMEHDRYIMTPEEAIKRCDENTIGVIPTLGVTFTLQYEDVKGISEALDKFEKETGLDIPIHVDAASGGFVAPFLQPEIVWDFRLPRVKSINGSGHKFGLSPLGVGWVVWRGKNDIHKDLVFDVNYLGGNMPTFSLNFSR 317          
BLAST of EY680176 vs. ExPASy Swiss-Prot
Match: GADB_DICDI (Glutamate decarboxylase B OS=Dictyostelium discoideum GN=gadB PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 6.873e-62
Identity = 116/218 (53.21%), Postives = 154/218 (70.64%), Query Frame = 2
Query:   17 IIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKEDLPEELIFHINYLRADHPTFPPHFPK 670
            I+A L+NAP  DS   +G  T GSSEA ML GLA K  W+  RK  G P+DKPNIVTG  VQ+CW KFA YF++E++E+ +  G YVM+  + ++ VDENTI V   LG T   ++EDV  +++ L +  KE+G + PIHVDAASGGF+APF+  E+ WDFRLP VKSIN SGHK+GL   G+GWVVWR K+DL ++L+F++NYL  +  TF  +F +
Sbjct:  101 ILADLWNAP--DSSDTIGCSTTGSSEAAMLGGLALKWNWRENRKKLGLPYDKPNIVTGP-VQICWHKFALYFDIEIREIPMENGRYVMNSEEVLKRVDENTIGVIPTLGVTFTLQYEDVFSISNALDKFEKESGINIPIHVDAASGGFVAPFIQQEIIWDFRLPRVKSINASGHKFGLSPLGVGWVVWREKKDLHKDLVFNVNYLGGNMSTFSLNFSR 315          
BLAST of EY680176 vs. ExPASy Swiss-Prot
Match: DCEB_SHIFL (Glutamate decarboxylase beta OS=Shigella flexneri GN=gadB PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.872e-59
Identity = 108/218 (49.54%), Postives = 151/218 (69.27%), Query Frame = 2
Query:   17 IIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKEDLPEELIFHINYLRADHPTFPPHFPK 670
            ++A L++AP   +  AVG  T+GSSEA ML G+A K +W+ + +A GKP DKPN+V G  VQ+CW KFARY++VEL+E+ +  G   MDP + +E  DENTI V    G T  G +E  + L+D L +   +TG D  +H+DAASGGF+APF+ P++ WDFRLP VKSI+ SGHK+GL   G GWV+WR++E LP+EL+F+++YL     TF  +F +
Sbjct:  103 MVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSR 319          
BLAST of EY680176 vs. ExPASy Swiss-Prot
Match: DCEB_ECOLI (Glutamate decarboxylase beta OS=Escherichia coli (strain K12) GN=gadB PE=1 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.872e-59
Identity = 108/218 (49.54%), Postives = 151/218 (69.27%), Query Frame = 2
Query:   17 IIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKEDLPEELIFHINYLRADHPTFPPHFPK 670
            ++A L++AP   +  AVG  T+GSSEA ML G+A K +W+ + +A GKP DKPN+V G  VQ+CW KFARY++VEL+E+ +  G   MDP + +E  DENTI V    G T  G +E  + L+D L +   +TG D  +H+DAASGGF+APF+ P++ WDFRLP VKSI+ SGHK+GL   G GWV+WR++E LP+EL+F+++YL     TF  +F +
Sbjct:  103 MVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSR 319          
BLAST of EY680176 vs. ExPASy Swiss-Prot
Match: DCEB_ECO57 (Glutamate decarboxylase beta OS=Escherichia coli O157:H7 GN=gadB PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.872e-59
Identity = 108/218 (49.54%), Postives = 151/218 (69.27%), Query Frame = 2
Query:   17 IIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKEDLPEELIFHINYLRADHPTFPPHFPK 670
            ++A L++AP   +  AVG  T+GSSEA ML G+A K +W+ + +A GKP DKPN+V G  VQ+CW KFARY++VEL+E+ +  G   MDP + +E  DENTI V    G T  G +E  + L+D L +   +TG D  +H+DAASGGF+APF+ P++ WDFRLP VKSI+ SGHK+GL   G GWV+WR++E LP+EL+F+++YL     TF  +F +
Sbjct:  103 MVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSR 319          
BLAST of EY680176 vs. ExPASy Swiss-Prot
Match: DCEA_SHIFL (Glutamate decarboxylase alpha OS=Shigella flexneri GN=gadA PE=2 SV=2)

HSP 1 Score: 229.565 bits (584), Expect = 1.872e-59
Identity = 108/218 (49.54%), Postives = 151/218 (69.27%), Query Frame = 2
Query:   17 IIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKEDLPEELIFHINYLRADHPTFPPHFPK 670
            ++A L++AP   +  AVG  T+GSSEA ML G+A K +W+ + +A GKP DKPN+V G  VQ+CW KFARY++VEL+E+ +  G   MDP + +E  DENTI V    G T  G +E  + L+D L +   +TG D  +H+DAASGGF+APF+ P++ WDFRLP VKSI+ SGHK+GL   G GWV+WR++E LP+EL+F+++YL     TF  +F +
Sbjct:  103 MVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSR 319          
The following BLAST results are available for this feature:
BLAST of EY680176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
DCE1_ARATH1.115e-12078.72Glutamate decarboxylase 1 OS=Arabidopsis thaliana ... [more]
DCE_PETHY2.102e-11982.13Glutamate decarboxylase OS=Petunia hybrida GN=GAD ... [more]
DCE2_ARATH8.832e-11882.31Glutamate decarboxylase 2 OS=Arabidopsis thaliana ... [more]
DCE_SOLLC2.940e-11377.99Glutamate decarboxylase OS=Solanum lycopersicum PE... [more]
GADA_DICDI1.210e-6656.88Glutamate decarboxylase A OS=Dictyostelium discoid... [more]
GADB_DICDI6.873e-6253.21Glutamate decarboxylase B OS=Dictyostelium discoid... [more]
DCEB_SHIFL1.872e-5949.54Glutamate decarboxylase beta OS=Shigella flexneri ... [more]
DCEB_ECOLI1.872e-5949.54Glutamate decarboxylase beta OS=Escherichia coli (... [more]
DCEB_ECO571.872e-5949.54Glutamate decarboxylase beta OS=Escherichia coli O... [more]
DCEA_SHIFL1.872e-5949.54Glutamate decarboxylase alpha OS=Shigella flexneri... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-008-C02-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680176 ID=EY680176; Name=EY680176; organism=Citrus sinensis; type=EST; length=880bp
CCACGCGTCCGGTGAAATTATAGCCCGACTGTTCAATGCTCCACTGGAGG
ACTCCGAGACGGCTGTCGGAGTTGGAACCGTAGGATCATCGGAAGCCATA
ATGTTGGCCGGCCTTGCATTCAAAAGAAAGTGGCAGAACAAGCGCAAGGC
TGAAGGAAAGCCCTTTGACAAACCCAACATTGTCACTGGAGCGAACGTTC
AGGTCTGCTGGGAGAAATTTGCAAGGTATTTTGAGGTGGAGTTGAAGGAA
GTGAAGCTGTCGGAAGGCTACTACGTGATGGACCCAGCCAAAGCTGTAGA
AATGGTGGATGAAAACACTATCTGTGTTGCTGCTATTCTGGGTTCTACTC
TCAATGGAGAATTTGAAGATGTCAAGCTCTTGAACGACCTTTTGACAGAG
AAGAACAAGGAAACAGGATGGGATACTCCAATTCATGTTGATGCTGCTAG
TGGTGGCTTCATTGCACCATTTTTGTACCCAGAGCTTGAATGGGACTTCC
GCTTGCCGCTGGTGAAGAGTATTAATGTTAGTGGCCACAAGTACGGGCTT
GTGTATGCTGGTATTGGTTGGGTTGTTTGGAGAAACAAAGAAGACTTGCC
TGAAGAACTCATCTTCCACATCAATTACCTAAGAGCTGATCACCCCACCT
TCCCCCCTCATTTTCCTAAAGGGTCTAGCCCAAGAAATTGCTCCGTAACT
ACCAACTAATCCCCTTAGGTTTTGAAGGGATACCGCATTGGGATGGAAAA
TTGCCCCAAAAATGCATGGGGGCTAAAAAAAGGACAAAAAAAAACCCGGC
CCCCTTCAAAATTTGTGGCCAAAGGAACAAAGGGGTTCCCCTTGGGGGGA
TTTTTTCCCTACAAGGAAAAAAAAAAGCCC
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