EY744811

Overview
NameEY744811
Unique NameEY744811
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length975
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY744811 vs. ExPASy Swiss-Prot
Match: PAP8_ARATH (Probable plastid-lipid-associated protein 8, chloroplastic OS=Arabidopsis thaliana GN=PAP8 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 2.045e-49
Identity = 107/183 (58.47%), Postives = 128/183 (69.95%), Query Frame = 2 
Query:    2 MAAAAFSLTLSSPVSKPHTFCTSHYSKPINASFSASLPCK----RSPRTALKIVRAVSISSPDLRTGPDDLVASILSKVNQSDGGVSLXXXXXXXXXXXXXXLQKYCVEAPVKCPLIFGEWDVVYCSVPTSPGGGYRSAFGRLFFKTKEMIQAVEAPDTVRNKVSFTALGFLDGEVSLKGKLK 538
            MAA A SLT++S  S+P T    H S+ +N     S+P K    RS R  L +V +VS  + +LRTGPDDL++++LSKV  SDGGV+L              LQKYCV+ PVK PLIFG+W+VVYCS PTSPGGGYRS  GRLFFKTKEMIQA++APD VRNKVS  A GFLDG+VSL GKLK
Sbjct:    1 MAATASSLTIASSFSEPRT--QIHSSRRLNLPLQYSIPYKVLRSRSRRLGL-VVSSVSAPNVELRTGPDDLISTLLSKVANSDGGVTLSPEQHKEVAQVAGELQKYCVKEPVKNPLIFGDWEVVYCSRPTSPGGGYRSVIGRLFFKTKEMIQAIDAPDIVRNKVSINAFGFLDGDVSLTGKLK 180
The following BLAST results are available for this feature:
BLAST of EY744811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PAP8_ARATH2.045e-4958.47Probable plastid-lipid-associated protein 8, chlor... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-003-G10-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744811 ID=EY744811; Name=EY744811; organism=Citrus sinensis; type=EST; length=975bp
CATGGCCGCTGCTGCTTTTTCTCTTACACTCTCATCCCCTGTTTCTAAAC
CCCACACATTCTGCACAAGTCATTATTCAAAACCCATAAACGCAAGTTTT
TCAGCTTCACTTCCTTGCAAAAGAAGTCCTCGCACCGCACTGAAAATCGT
CAGGGCTGTTTCCATCTCCAGCCCAGATCTGCGAACCGGTCCCGACGATT
TGGTTGCTTCTATCCTCTCCAAGGTGAACCAATCGGATGGAGGAGTTTCA
CTAGCCAAAGAAGAACACAAAGAGGTCGCTGAAGTTGCTCAAGAGTTGCA
AAAATATTGTGTTGAAGCACCAGTAAAATGCCCTCTAATCTTTGGAGAAT
GGGATGTCGTGTACTGTTCAGTGCCAACTTCACCTGGGGGTGGCTACAGA
AGTGCATTTGGCCGTCTTTTCTTCAAAACAAAGGAAATGATTCAGGCTGT
TGAAGCTCCTGACACTGTTAGAAACAAGGTTTCCTTCACCGCTCTGGGTT
TTCTTGACGGAGAGGTCTCTTTGAAAGGAAAGCTTAAATGCTCTGGATGA
GAAAAGGATTAAAGGTGAAATTTGAACCACCTGAACCGAAAAGTGAGACG
AATGGGAATTCCGATATGGCGGTCAAAAAAGGGGTAAGTTGCAAATACCT
TACTTGCCTGAAAAAAAACCAGGCAGGGCGAAACAAACCAAAAAGGCCAC
AACTACGGAAAGAACAAAAAAGCAAACAAACAACAAAAAGCCGNANAAAA
TAAAAGATTGGGCGTTGGGGTCGTGAAAACACCGAAGGCATTTCTTGGGA
AGGCACAGTTATTGGCCGGGAAAAAAAGAAAATATCGGCGGAAAACGGGT
GCCCCTCGCACACCCCCCAATTCATGACCAACACCCGAGAGAATCACCAA
CCCGCGCATGGGTGATTAAGAAAGGAAAAACACACGGACACCAGCGACAA
ACTTAACGCTAAAAACTCCCAGCCG
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