EY679951

Overview
NameEY679951
Unique NameEY679951
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY679951 vs. ExPASy Swiss-Prot
Match: Y492_MYCTU (Uncharacterized GMC-type oxidoreductase Rv0492c/MT0511/MT0512 OS=Mycobacterium tuberculosis GN=Rv0492c PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 6.340e-13
Identity = 62/216 (28.70%), Postives = 90/216 (41.67%), Query Frame = 1 
Query:   19 VGGGSAVNWSACIKTPKSLLQEWAGDYKLPLFGSPDYLSA-MDIVWERIGVTENCVQ-EGFQNQVLQKGCKNLGLDVERIPRNSSENHYCGSCGHGCKSGDKKGTDSTWLVDAVNHGAVILTGCKAERFILEKSDNGSTRTMKCSGVIAKALNNDIRMKFQIETKATISACGALLTPPLMISSGLKNQP-IGKNPSLHPVLMAWGYFPDSNFKFKG 657
            VGG + VN   C +   ++ + W  ++ L L   PD L   +D   + + V    ++  G   ++L +  K+LG     IPRN+     C  C  GC S  K G     L  A   GA I++  + ER +         R  +  G     L             A + A GA  TP L+  SGL   P +G N +LHP  M  G F D  F ++G
Sbjct:  221 VGGTTVVNSGTCFRPSLAVQRRWRDEFGLGL-ADPDQLGRRLDDAEQTLRVAPVPLEIMGRNGRLLLQAAKSLGWRAAPIPRNAPGCRGCCQCAIGCPSNAKFGVHLNALPQACAAGARIISWARVERILHRAGRAYGVRARRPDGTTLDVL-----------ADAVVVAAGATETPGLLRRSGLGGHPRLGHNLALHPATMLAGLFDDDVFAWRG 424
The following BLAST results are available for this feature:
BLAST of EY679951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y492_MYCTU6.340e-1328.70Uncharacterized GMC-type oxidoreductase Rv0492c/MT... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-005-G09-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679951 ID=EY679951; Name=EY679951; organism=Citrus sinensis; type=EST; length=925bp
CCACGCGTCCGATCAACTGTTGGTGGCGGCTCAGCTGTCAACTGGTCGGC
CTGCATCAAGACACCCAAGTCCTTGCTTCAGGAATGGGCAGGGGACTATA
AGCTCCCACTCTTTGGTAGCCCTGACTATCTTTCGGCAATGGATATCGTG
TGGGAGAGGATTGGTGTTACGGAGAATTGTGTACAAGAGGGGTTCCAGAA
TCAAGTACTTCAAAAAGGATGTAAAAATCTTGGCCTTGATGTTGAAAGGA
TACCCAGAAATTCCTCGGAGAATCATTACTGTGGATCTTGCGGTCATGGC
TGTAAAAGCGGAGACAAAAAGGGGACTGATAGTACCTGGCTTGTTGATGC
CGTAAACCATGGTGCAGTCATTTTAACGGGATGCAAAGCCGAGAGATTCA
TATTGGAGAAGAGCGATAATGGAAGCACAAGGACAATGAAATGCTCGGGA
GTGATAGCAAAAGCTTTGAATAACGACATCAGAATGAAGTTTCAGATCGA
AACAAAAGCAACAATCTCAGCATGTGGGGCTCTATTGACTCCCCCTTTGA
TGATCTCTAGTGGATTGAAGAATCAGCCCATTGGCAAGAATCCTTCCCTT
CATCCTGTTCTGATGGCCTGGGGATACTTTCCAGACTCAAACTTTAAGTT
CAAGGGAAAAAAACTATGAAGGTGGGAAATATCACCTCCGGCCCCAAAGG
GGGTTTTCAACCAAATTCCGATTTGAGAAGCCCCTCATCGAAAACTCCTG
AATTTTTCCCTGGCAAATTTTTCCGGGATTTTTGCCCTTTGGTTGTCCGG
AATTTGACTTTAACCAAACCCTTGTTTGAAAATTTTTCAAACCCCGCACC
TTTTGTAATAACATATATTCGTGGGGTTCCGCGGATTTGGGAGAAAAGTT
AAATGGGGAAGGGGAAGGGGAAAAC
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