EY744799

Overview
NameEY744799
Unique NameEY744799
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length918
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744799 vs. ExPASy Swiss-Prot
Match: SUGT1_HUMAN (Suppressor of G2 allele of SKP1 homolog OS=Homo sapiens GN=SUGT1 PE=1 SV=3)

HSP 1 Score: 138.272 bits (347), Expect = 6.060e-32
Identity = 71/155 (45.81%), Postives = 97/155 (62.58%), Query Frame = 3
Query:    6 EAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKAEPIQWSSLEFSKGAVVPQRVNPPSVSGSPRPTYPSSKPTRVDWDKLEAQVXXXXXXXXLDGDAALNKFFQEIYADADEDTRRAMKKSFVESNGTVLSTNWKEVGSKKVEGSPPDGMEMKKW 470
            E Y+ +  L   IIP +  ++VLSTK+EI+L K E ++W  LE  +G V      P       +  YPSS P   +WDKL  ++        L+GDAALN+ FQ+IY+D  ++ +RAM KSF+ES GTVLSTNW +VG +KVE +PPD ME KK+
Sbjct:  216 EDYNLKLELLHPIIPEQSTFKVLSTKIEIKLKKPEAVRWEKLE-GQGDVP----TPKQFVADVKNLYPSSSPYTRNWDKLVGEIKEEEKNEKLEGDAALNRLFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWSDVGKRKVEINPPDDMEWKKY 365          
BLAST of EY744799 vs. ExPASy Swiss-Prot
Match: SUGT1_BOVIN (Suppressor of G2 allele of SKP1 homolog OS=Bos taurus GN=SUGT1 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.350e-31
Identity = 71/153 (46.41%), Postives = 96/153 (62.75%), Query Frame = 3
Query:   12 YHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKAEPIQWSSLEFSKGAVVPQRVNPPSVSGSPRPTYPSSKPTRVDWDKLEAQVXXXXXXXXLDGDAALNKFFQEIYADADEDTRRAMKKSFVESNGTVLSTNWKEVGSKKVEGSPPDGMEMKKW 470
            Y  + RL   IIP +  ++VLSTK+EI++ K E ++W  LE  +G V     NP       +  YPSS     +WDKL  ++        L+GDAALNK FQ+IY+D  ++ +RAM KSF+ES GTVLSTNW +VG +KVE +PPD ME KK+
Sbjct:  191 YSLKLRLLHPIIPEQSTFKVLSTKIEIKMKKPEAVRWEKLE-GQGDVP----NPKPFIADVKNLYPSSSHYTRNWDKLVGEIKEEEKNEKLEGDAALNKLFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWSDVGKRKVEINPPDDMEWKKY 338          
BLAST of EY744799 vs. ExPASy Swiss-Prot
Match: SUGT1_MOUSE (Suppressor of G2 allele of SKP1 homolog OS=Mus musculus GN=Sugt1 PE=2 SV=3)

HSP 1 Score: 135.191 bits (339), Expect = 5.130e-31
Identity = 68/155 (43.87%), Postives = 96/155 (61.94%), Query Frame = 3
Query:    6 EAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKAEPIQWSSLEFSKGAVVPQRVNPPSVSGSPRPTYPSSKPTRVDWDKLEAQVXXXXXXXXLDGDAALNKFFQEIYADADEDTRRAMKKSFVESNGTVLSTNWKEVGSKKVEGSPPDGMEMKKW 470
            E Y  + RL   IIP +  ++VLSTK+EI++ K E ++W  LE       P++      +   +  YPSS     +WDKL  ++        L+GDAALNK FQ+IY+D  ++ +RAM KSF+ES GTVLSTNW +VG +KVE +PPD ME K++
Sbjct:  187 EDYSLKLRLLHPIIPEQSTFKVLSTKIEIKMKKPEAVRWEKLEGQGDEPTPKQF-----TADVKNMYPSSSHYTRNWDKLVGEIKEEEKNEKLEGDAALNKLFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWSDVGKRKVEINPPDDMEWKQY 336          
BLAST of EY744799 vs. ExPASy Swiss-Prot
Match: SUGT1_RAT (Suppressor of G2 allele of SKP1 homolog OS=Rattus norvegicus GN=Sugt1 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.546e-30
Identity = 66/148 (44.59%), Postives = 93/148 (62.84%), Query Frame = 3
Query:   27 RLFGKIIPAKCRYEVLSTKVEIRLAKAEPIQWSSLEFSKGAVVPQRVNPPSVSGSPRPTYPSSKPTRVDWDKLEAQVXXXXXXXXLDGDAALNKFFQEIYADADEDTRRAMKKSFVESNGTVLSTNWKEVGSKKVEGSPPDGMEMKKW 470
            RL   IIP +  ++VLSTK+EI++ K E ++W  LE       P++      +   +  YPSS     +WDKL  ++        L+GDAALNK FQ+IY+D  ++ +RAM KSF+ES GTVLSTNW +VG +KVE +PPD ME K++
Sbjct:  194 RLLHPIIPEQSTFKVLSTKIEIKMKKPEAVRWEKLEGQGDVPAPKQF-----TADVKNMYPSSSHYTRNWDKLVGEIKEEEKNEKLEGDAALNKLFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWSDVGKRKVEINPPDDMEWKQY 336          
BLAST of EY744799 vs. ExPASy Swiss-Prot
Match: SUGT1_DICDI (Protein SUGT1 homolog OS=Dictyostelium discoideum GN=sugt1 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.708e-26
Identity = 67/152 (44.08%), Postives = 90/152 (59.21%), Query Frame = 3
Query:   18 FQPRLFGKIIPAKCRYEVLSTKVEIRLAKAEPIQWSSLEFSKGAVVPQRVNPPSVSGSPRPTYPSSKPTRVDWDKLEAQVXXXXXXXXLDGDAALNKFFQEIYADADEDTRRAMKKSFVESNGTVLSTNWKEVGSKKVEGSPPDGMEMKKWE 473
            F+  LF  I+         STKVEI++ K+  I+W +LEF+  +     ++  S S    P  PS   ++ DWDKL  +         L+GD ALNK F++I++   ED +RAM KSF ES GTVLSTNW EVGSKKV G PP G+E K++E
Sbjct:  244 FEMDLFDPIVDKDSTIHYYSTKVEIKMKKSRAIKWDTLEFTDKSGPVGLMDQISSS----PAVPSPYASKKDWDKLPNE-----PEEKLEGDQALNKIFRDIFSKGSEDQQRAMMKSFTESGGTVLSTNWDEVGSKKVVGEPPKGLEFKQYE 386          
BLAST of EY744799 vs. ExPASy Swiss-Prot
Match: SGT1_YEAST (Protein SGT1 OS=Saccharomyces cerevisiae GN=SGT1 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.654e-21
Identity = 57/165 (34.55%), Postives = 83/165 (50.30%), Query Frame = 3
Query:   12 YHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKAEPIQWSSLEFS------------KGAVVPQRVNPPSVSGSPRPTYPSSKPTRVDWDKLEAQVXXXXXXXXLDGDAALNKFFQEIYADADEDTRRAMKKSFVESNGTVLSTNWKEVGSKKVEGSPPDGMEMKKW 470
            + +  +L  ++ P     ++   K+EI L+K +  QW  LE              K +    R+     +   R +YPSS   ++DW KL+            D       FFQ++YA AD DT+RAM KSF+ESNGT LST+W++V    V+ SPP+GME K W
Sbjct:  237 FQYNAKLSHEVDPKAVSLKIFPKKLEITLSKIDSTQWKKLEEDILTESSRLSDEGKNSDSATRLLSAETASKERLSYPSSSKKKIDWSKLDIDEEADEEAGSADS------FFQKLYAGADPDTKRAMMKSFIESNGTALSTDWEDVSKGTVKTSPPEGMEPKHW 395          
BLAST of EY744799 vs. ExPASy Swiss-Prot
Match: GIT7_SCHPO (Glucose-insensitive transcription protein 7 OS=Schizosaccharomyces pombe GN=git7 PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 6.285e-21
Identity = 64/152 (42.11%), Postives = 83/152 (54.61%), Query Frame = 3
Query:   30 LFGKIIPAKCRYEVLSTKVEIRLAK-AEPIQWSSLEFSKGA----VVPQRVNPPSVSGSPRPTYPSSKPTRVDWDKLEAQVXXXXXXXXLDGDAALNKFFQEIYADADEDTRRAMKKSFVESNGTVLSTNWKEVGSKKVEGSPPDGMEMKKW 470
            L+ +I+P K  +++ S+KVEI L K    I+W +L  S       V  +  N  S SG+       +K    DWD L              G+AAL   FQ +Y +AD+DTRRAM KS+ ESNGT LSTNWK+V SK  E  PP GME KK+
Sbjct:  237 LYEEIVPEKSSFKLFSSKVEITLIKKVSEIKWEALVKSPANNSVNVYAKDSNHSSASGN-------TKNKAKDWDSLAKLADLEEDEPT--GEAALANLFQNLYKNADDDTRRAMMKSYTESNGTALSTNWKDVKSKTFETKPPQGMEPKKF 379          
The following BLAST results are available for this feature:
BLAST of EY744799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
SUGT1_HUMAN6.060e-3245.81Suppressor of G2 allele of SKP1 homolog OS=Homo sa... [more]
SUGT1_BOVIN1.350e-3146.41Suppressor of G2 allele of SKP1 homolog OS=Bos tau... [more]
SUGT1_MOUSE5.130e-3143.87Suppressor of G2 allele of SKP1 homolog OS=Mus mus... [more]
SUGT1_RAT2.546e-3044.59Suppressor of G2 allele of SKP1 homolog OS=Rattus ... [more]
SUGT1_DICDI1.708e-2644.08Protein SUGT1 homolog OS=Dictyostelium discoideum ... [more]
SGT1_YEAST1.654e-2134.55Protein SGT1 OS=Saccharomyces cerevisiae GN=SGT1 P... [more]
GIT7_SCHPO6.285e-2142.11Glucose-insensitive transcription protein 7 OS=Sch... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C5-003-003-F09-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744799 ID=EY744799; Name=EY744799; organism=Citrus sinensis; type=EST; length=918bp
GTGAAGAGGCATATCATTTTCAACCTCGCTTATTTGGAAAGATAATACCT
GCCAAATGCAGATATGAAGTCCTCTCAACCAAAGTTGAAATCCGCCTTGC
TAAAGCTGAACCAATACAATGGTCGTCTCTTGAATTCAGCAAGGGAGCTG
TAGTTCCTCAAAGGGTTAATCCACCATCCGTTTCTGGATCACCAAGACCC
ACCTACCCTTCCTCAAAACCGACAAGAGTAGATTGGGACAAGCTTGAAGC
TCAAGTGAAGAAGGAGGAAAAAGAAGAAAAGCTAGATGGTGATGCAGCAT
TGAACAAATTTTTCCAGGAGATTTATGCTGATGCAGATGAGGACACAAGA
CGAGCCATGAAAAAGTCTTTCGTCGAGTCAAACGGGACGGTGCTCTCCAC
AAATTGGAAAGAAGTTGGTTCAAAGAAGGTGGAAGGAAGTCCACCTGATG
GCATGGAAATGAAGAAATGGGAATACTAAACTCTCCTTCTCTCCTTTAAT
TGGAGAAATTGTAATTTAGACTTTTTGAGTTTTGGTCTCTGAAACTTTTC
ATTTTTCATCTCTTCTTCAGGATCTTAATTATTCTTTTGTTGCTCGGTTG
TGCTTGAGTGTCTAAGCTTTAATGCTTAAATAAATTCTCTTTTCGGTTTC
GAATGTTCAATGTGCTGTAATTTGCCCTCGAAACTGGTCCTGGAATTTCT
TTTGTGAATAATCCTTACTCTAATGAAAATGGAGTTTCTAGGGTTCTGGG
GTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGGGGCCGTTCAAAA
AAGAACCAAACTTTACCAAACCCGGGGGAAGGGAAGTTCTAAACCCCTTT
CTAAAAGAGGACCCCTAAAATTTCATTTAACCTTGGGCCCCCGCGTTTTT
TTAAAACAATCCCGTGGA
back to top