EY679880

Overview
NameEY679880
Unique NameEY679880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679880 vs. ExPASy Swiss-Prot
Match: WRK19_ARATH (Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 8.189e-69
Identity = 125/196 (63.78%), Postives = 134/196 (68.37%), Query Frame = 2
Query:  212 KTCQVEGCGKGARGASGRCISHGGGRRCQKLGCHKGAEGRTVYCKAHGGGRRCEYLGCTKSAEGRTDYCIAHGGGRRCSHEGCTRA--------------------------------------------------ARGKSGLCIRHGGGKRCQKENCTKSAEGLSGLCISHGGGRRCQASGCTKGAQGSTMFCKA 649
            K CQVEGC KGAR ASGRCISHGGGRRCQK  C KGAEG+TVYCKAHGGGRRCEYLGCTK AEG TD+CIAHGGGRRC+HE CTR+                                                  ARG+SGLC+ HGGGKRCQ+ENCTKSAEGLSGLCISHGGGRRCQ+ GCTKGA+GS MFCKA
Sbjct:   91 KLCQVEGCQKGARDASGRCISHGGGRRCQKPDCQKGAEGKTVYCKAHGGGRRCEYLGCTKGAEGSTDFCIAHGGGRRCNHEDCTRSAWGRTEFCVKHGGGARCKTYGCGKSASGPLPFCRAHGGGKKCSHEDCTGFARGRSGLCLMHGGGKRCQRENCTKSAEGLSGLCISHGGGRRCQSIGCTKGAKGSKMFCKA 286          

HSP 2 Score: 172.17 bits (435), Expect = 3.831e-42
Identity = 77/165 (46.67%), Postives = 99/165 (60.00%), Query Frame = 2
Query:  251 GASGRCISHGGGRRCQKLGCHKGAEGRTVYCKAHGGGRRCEYLGCTKSAEGRTDYCIAHGGGRRCSHEGCTRAARGKSGLCIRHGGGKRCQKENCTKSAEGLSGLCISHGGGRRCQASGCTKGAQGSTMFCKAHGGGKRCTAPGVQGWLKEALLFVRAMEVGKKC 745
            G S +  +    + CQ  GC KGA   +  C +HGGGRRC+   C K AEG+T YC AHGGGRRC + GCT+ A G +  CI HGGG+RC  E+CT+SA G +  C+ HGGG RC+  GC K A G   FC+AHGGGK+C+     G+ +           GK+C
Sbjct:   79 GLSQQLNNSSSSKLCQVEGCQKGARDASGRCISHGGGRRCQKPDCQKGAEGKTVYCKAHGGGRRCEYLGCTKGAEGSTDFCIAHGGGRRCNHEDCTRSAWGRTEFCVKHGGGARCKTYGCGKSASGPLPFCRAHGGGKKCSHEDCTGFARGRSGLCLMHGGGKRC 243          

HSP 3 Score: 135.576 bits (340), Expect = 3.973e-31
Identity = 69/155 (44.52%), Postives = 83/155 (53.55%), Query Frame = 2
Query:  368 CEYLGCTKSAEGRTDYCIAHGGGRRCSHEGCTRAARGKSGLCIRHGGGKRCQKENCTKSAEGLSGLCISHGGGRRCQASGCTKGAQGSTMFCKAHGGGKRCTAPGVQGWLKEALLFVRAMEVGKKCPFQGGGGWYKKPGMEGTNFLPTKWGGVKR 832
            C+  GC K A   +  CI+HGGGRRC    C + A GK+  C  HGGG+RC+   CTK AEG +  CI+HGGGRRC    CT+ A G T FC  HGGG RC   G        L F RA   GKKC  +   G+ +     G + L    GG KR
Sbjct:   93 CQVEGCQKGARDASGRCISHGGGRRCQKPDCQKGAEGKTVYCKAHGGGRRCEYLGCTKGAEGSTDFCIAHGGGRRCNHEDCTRSAWGRTEFCVKHGGGARCKTYGCGKSASGPLPFCRAHGGGKKCSHEDCTGFAR-----GRSGLCLMHGGGKR 242          

HSP 4 Score: 115.161 bits (287), Expect = 5.557e-25
Identity = 51/93 (54.84%), Postives = 61/93 (65.59%), Query Frame = 2
Query:  392 SAEGRTDYCIAHGGGRRCSHEGCTRAARGKSGLCIRHGGGKRCQKENCTKSAEGLSGLCISHGGGRRCQASGCTKGAQGSTMFCKAHGGGKRC 670
            S  G +         + C  EGC + AR  SG CI HGGG+RCQK +C K AEG +  C +HGGGRRC+  GCTKGA+GST FC AHGGG+RC
Sbjct:   76 SGSGLSQQLNNSSSSKLCQVEGCQKGARDASGRCISHGGGRRCQKPDCQKGAEGKTVYCKAHGGGRRCEYLGCTKGAEGSTDFCIAHGGGRRC 168          
The following BLAST results are available for this feature:
BLAST of EY679880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
WRK19_ARATH8.189e-6963.78Probable WRKY transcription factor 19 OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-005-A08-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679880 ID=EY679880; Name=EY679880; organism=Citrus sinensis; type=EST; length=928bp
CGGTTGGAAGACGGGTGTTTCCTTGCCGCCATTGCAGACTGCACCAAATA
AAGAGAGTAGATTCTTTTTCGATTGTGCTCTGAGAACTAATGACCTTACT
GCCAATGTTCATGATCTCTCATCAAGTGTGGTAACCACACCAAGAAGCTC
AGTCACCTGTACTTCCGGGATAACCCAACAGCATCAGCGACTACAGAGGA
GCTCTAGTTCCAAGACCTGTCAGGTTGAGGGATGTGGAAAGGGAGCTAGA
GGTGCTTCTGGCCGTTGTATTTCCCATGGTGGTGGCCGAAGGTGTCAAAA
ACTCGGCTGCCACAAGGGAGCCGAGGGCCGGACTGTGTACTGCAAAGCCC
ATGGGGGTGGTCGGCGGTGTGAATACCTTGGGTGTACAAAGAGTGCGGAA
GGGCGCACTGATTACTGTATTGCCCATGGTGGTGGTCGGAGATGCAGCCA
TGAGGGTTGCACTCGAGCAGCTAGAGGGAAATCTGGGTTGTGTATCCGTC
ATGGTGGGGGCAAGAGATGTCAAAAGGAAAATTGTACAAAGAGTGCTGAA
GGGCTCTCAGGTCTTTGTATCTCACATGGAGGTGGTCGACGATGCCAAGC
CTCAGGTTGCACAAAAGGAGCACAAGGGAGCACAATGTTCTGCAAGGCAC
ATGGTGGTGGAAAACGTTGCACTGCCCCGGGTGTACAAGGGTGGCTAAAG
GAAGCACTTCTTTTTGTAAGGGCCATGGAGGTGGGAAAAAAATGCCCATT
CCAAGGTGGGGGGGGTTGGTACAAAAAACCTGGGATGGAAGGAACCAACT
TTTTGCCTACCAAATGGGGGGGGGTAAAACGGGGGGGTCCCCTTCCCTGA
ATGAAAAAAAAAAATGCCAAGGGGGAACGGAAAAGGAAATTTTTGGTCCC
CCTCCCTGGGGGGGGGGGGGAAAAAAAA
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