EY679820

Overview
NameEY679820
Unique NameEY679820
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1020
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679820 vs. ExPASy Swiss-Prot
Match: PROSC_HUMAN (Proline synthetase co-transcribed bacterial homolog protein OS=Homo sapiens GN=PROSC PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.791e-27
Identity = 78/172 (45.35%), Postives = 107/172 (62.21%), Query Frame = 2
Query:   89 LRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA-----QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR-KPLKVLVQVNYRGEESKSG---S*AFRVVGELGERW*VKTGPNLEFCGLLT 571
            LR+V +RV QA  R  R  P  + R+VAVSKTKP  ++ + Y  G R FGENYVQE++EKA+      L  +++WHFIG+LQ   V  L+A VPNL M+E+VD+ K+A ++N   +  G  + LKV+VQ+N  GEESK G   S    +V  +  +      PNLEF GL+T
Sbjct:   17 LRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEKASNPKILSLCPEIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKLADKVNSSWQRKGSPERLKVMVQINTSGEESKHGLPPSETIAIVEHINAKC-----PNLEFVGLMT 182          
BLAST of EY679820 vs. ExPASy Swiss-Prot
Match: PROSC_PONAB (Proline synthetase co-transcribed bacterial homolog protein OS=Pongo abelii GN=PROSC PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.989e-27
Identity = 77/172 (44.77%), Postives = 107/172 (62.21%), Query Frame = 2
Query:   89 LRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA-----QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR-KPLKVLVQVNYRGEESKSG---S*AFRVVGELGERW*VKTGPNLEFCGLLT 571
            LR+V +RV QA     R  P  + R+VAVSKTKP  ++ + Y  G R FGENYVQE++EKA+      L  +++WHFIG+LQ   V  L+A VPNL ++E+VD+ K+AG++N   +  G  + LKV+VQ+N  GEESK G   S    +V  +  +      PNLEF GL+T
Sbjct:   17 LRAVNERVQQAVALRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEKASNPKILSLGPEIKWHFIGHLQKQNVNKLMA-VPNLFVLETVDSVKLAGKVNSSWQKKGSPERLKVMVQINTSGEESKHGLPPSETIAIVEHINAKC-----PNLEFVGLMT 182          
BLAST of EY679820 vs. ExPASy Swiss-Prot
Match: PROSC_MOUSE (Proline synthetase co-transcribed bacterial homolog protein OS=Mus musculus GN=Prosc PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 8.887e-27
Identity = 74/170 (43.53%), Postives = 107/170 (62.94%), Query Frame = 2
Query:   89 LRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG-RKPLKVLVQVNYRGEESKSGS*AFRVVGELGERW*VKTG-PNLEFCGLLT 571
            LR+V +RV Q+  R  R  P  + R+VAVSKTKP  ++ + Y  G R FGENYVQE++EKA+         +++WHFIG+LQ   V  L+A VPNL+M+E+VD+ K+A ++N   +  G  +PLKV+VQ+N  GE+SK G      +  +     +K   P+LEF GL+T
Sbjct:   17 LRAVNERVQQSVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEKASNPKILSSCPEIKWHFIGHLQKQNVNKLMA-VPNLSMLETVDSVKLADKVNSSWQKKGPTEPLKVMVQINTSGEDSKHGLLPSETIAVVEH---IKASCPSLEFVGLMT 182          
BLAST of EY679820 vs. ExPASy Swiss-Prot
Match: PROSC_BOVIN (Proline synthetase co-transcribed bacterial homolog protein OS=Bos taurus GN=PROSC PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 9.826e-26
Identity = 76/169 (44.97%), Postives = 105/169 (62.13%), Query Frame = 2
Query:   89 LRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR-KPLKVLVQVNYRGEESKSGS*AFRVVGELGERW*VKTGPNLEFCGLLT 571
            LR+V +RV QA  R  R  P  + R+VAVSKTKP  ++ + Y  G R FGENYVQE++EKA+         +++WHFIG+LQ   V  L+A VPNL+M+E+VD+ K+A ++N   +  G  + LKV+VQ+N  GE SK G     +   L E    K  P+LEF GL+T
Sbjct:   17 LRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYSHGQRTFGENYVQELLEKASNPQILSSCPEIKWHFIGHLQKQNVNKLMA-VPNLSMLETVDSVKLADKVNSAWQKKGSPERLKVMVQINTSGEASKHGLPPAEMAA-LVEHINAKC-PSLEFVGLMT 182          
BLAST of EY679820 vs. ExPASy Swiss-Prot
Match: Y394_PSEAE (UPF0001 protein PA0394 OS=Pseudomonas aeruginosa GN=PA0394 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.676e-25
Identity = 81/202 (40.10%), Postives = 111/202 (54.95%), Query Frame = 2
Query:   89 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNYRGEESKSGS*AFRVVGELGERW*VKTGPNLEFCGLLTTLGCQITHRTPEKLLEH*QNAELEG--MDRSLGIPEAALG 685
            +  V  R+ +AA+ + R P  + ++AVSKTKP + +R+ + AG R FGENY+QE + K A+L D  L WHFIG +QSNK +P+     +   V SVD  KIA RL+      G  PL V +QVN  GE SKSG  A   +  L E   VK  PNL   GL+      I   T E+  +H   A L    +D +LG+   ++G
Sbjct:    8 IAKVAARIREAAQAAGRDPATVGLLAVSKTKPAAAVREAHAAGLRDFGENYLQEALGKQAELADLPLNWHFIGPIQSNKTRPI---AEHFQWVHSVDRLKIAQRLSEQ-RPAGLPPLNVCLQVNVSGEASKSGC-APEDLPALAEA--VKQLPNLRLRGLMA-----IPEPTAERAAQHAAFARLRELLLDLNLGLDTLSMG 197          
BLAST of EY679820 vs. ExPASy Swiss-Prot
Match: Y112_PASMU (UPF0001 protein PM0112 OS=Pasteurella multocida GN=PM0112 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.201e-23
Identity = 63/135 (46.67%), Postives = 84/135 (62.22%), Query Frame = 2
Query:   89 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA---AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNYRGEESKSG 484
            L  + Q +  A +++ RP   ++++AVSKTKPV  I Q Y+AG   FGENYVQE VEK    AQ    LEWHFIG LQSNK K +     +   ++++D +KIA RLN       +KPL VL+Q+N   E+SKSG
Sbjct:    7 LAQIQQNIQHAVQQAKRPESAVKLLAVSKTKPVEDIYQAYQAGQTAFGENYVQEGVEKIQYFAQKNIPLEWHFIGPLQSNKTKLV---AEHFDWMQTLDRKKIADRLNEQ-RPHYKKPLNVLIQINISDEDSKSG 137          
BLAST of EY679820 vs. ExPASy Swiss-Prot
Match: PROSC_DICDI (Proline synthetase co-transcribed bacterial homolog protein OS=Dictyostelium discoideum GN=prosc PE=3 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.569e-23
Identity = 64/146 (43.84%), Postives = 91/146 (62.33%), Query Frame = 2
Query:   89 LRSVIQRVHQAAERSSRPPDR--IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRL----------NRMVETMGRKPLKVLVQVNYRGEESKSG 484
            L S  + +    E  S   DR  +++VAVSKTKP  +IR +Y+ GHR FGENY+QE+V K+ +L +  +++WHFIG++QSNK K +L  V NL +VE+V+N+KI  +L          N        K L +++QVN  GEESKSG
Sbjct:   10 LISSYKNIKDRVEIISNKFDRHNVKLVAVSKTKPTEMIRILYDKGHRHFGENYIQELVSKSEELSELNEIKWHFIGSIQSNKSK-ILTSVKNLYVVETVENKKILDKLAKSLLNNEENNNNNNNNNNKKLNIMIQVNTSGEESKSG 154          
BLAST of EY679820 vs. ExPASy Swiss-Prot
Match: YKC9_SCHPO (UPF0001 protein C644.09 OS=Schizosaccharomyces pombe GN=SPAC644.09 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.864e-22
Identity = 54/111 (48.65%), Postives = 75/111 (67.57%), Query Frame = 2
Query:  152 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNYRGEESKSG 484
            + +VAVSK  PV  + + Y AG R FGENY+QE ++K   +PDD++WHFIG+LQS+K K  +A V NL  +E++D EK A  +N   E + + PL V +QVN  GEE+K G
Sbjct:   24 VLLVAVSKFHPVETLMEAYNAGQRHFGENYMQEFLKKVELMPDDVQWHFIGSLQSSKCKK-IASVKNLYSIETIDTEKKARLVNSAREAL-QLPLNVYIQVNTSGEENKGG 132          
BLAST of EY679820 vs. ExPASy Swiss-Prot
Match: Y090_HAEIN (UPF0001 protein HI0090 OS=Haemophilus influenzae GN=HI0090 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.864e-22
Identity = 59/135 (43.70%), Postives = 82/135 (60.74%), Query Frame = 2
Query:   89 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNYRGEESKSG 484
            L  + Q++  A +  +R  + ++++AVSKTKP+S I   Y+AG   FGENYVQE VEK         +LEWHFIG LQSNK + +     +   ++++D  KIA RLN    T  + PL VL+Q+N   EESKSG
Sbjct:    7 LNLIQQKIETACKEENRNQNTVKLLAVSKTKPISAILSAYQAGQTAFGENYVQEGVEKIQYFESQGINLEWHFIGPLQSNKTRLV---AEHFDWMQTLDRAKIADRLNEQRPT-NKAPLNVLIQINISDEESKSG 137          
BLAST of EY679820 vs. ExPASy Swiss-Prot
Match: YPI1_VIBAL (UPF0001 protein in pilT-proC intergenic region OS=Vibrio alginolyticus PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.124e-21
Identity = 68/166 (40.96%), Postives = 94/166 (56.63%), Query Frame = 2
Query:   89 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK----AAQLPDD-LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNYRGEESKSGS*AFRVVGELGERW*VKTGPNLEFCGLLT 571
            +  +  ++    ++  R P+ ++++AVSKTKPV  I + Y+AG   FGENYVQE V K    A   PD+ +EWHFIG +QSNK + +     +   V ++D  KIA RLN        KPL+VL+QVN  GE SKSG     V  EL E   +   PNL   GL++
Sbjct:    8 IEHITSQIRYDEQKCGRTPESVQLLAVSKTKPVEAILEAYQAGQTAFGENYVQEGVSKVQHFAEHYPDNRIEWHFIGPIQSNKSRLV---AEHFDWVHTIDRTKIAQRLNDQ-RPSELKPLQVLIQVNTSGEASKSGVTEAEVF-ELAEL--ISRLPNLTLRGLMS 166          
The following BLAST results are available for this feature:
BLAST of EY679820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
PROSC_HUMAN1.791e-2745.35Proline synthetase co-transcribed bacterial homolo... [more]
PROSC_PONAB3.989e-2744.77Proline synthetase co-transcribed bacterial homolo... [more]
PROSC_MOUSE8.887e-2743.53Proline synthetase co-transcribed bacterial homolo... [more]
PROSC_BOVIN9.826e-2644.97Proline synthetase co-transcribed bacterial homolo... [more]
Y394_PSEAE1.676e-2540.10UPF0001 protein PA0394 OS=Pseudomonas aeruginosa G... [more]
Y112_PASMU1.201e-2346.67UPF0001 protein PM0112 OS=Pasteurella multocida GN... [more]
PROSC_DICDI1.569e-2343.84Proline synthetase co-transcribed bacterial homolo... [more]
YKC9_SCHPO3.864e-2248.65UPF0001 protein C644.09 OS=Schizosaccharomyces pom... [more]
Y090_HAEIN3.864e-2243.70UPF0001 protein HI0090 OS=Haemophilus influenzae G... [more]
YPI1_VIBAL1.124e-2140.96UPF0001 protein in pilT-proC intergenic region OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-004-D04-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679820 ID=EY679820; Name=EY679820; organism=Citrus sinensis; type=EST; length=1020bp
CCCACGCGTCCGGAATCACATCAACGAACAAGTAGAAGTAGAAACCATGG
CTGCGTCTGCCGCCACAGATGGCGTTGCAGCGACGGCGCTTCGGTCCGTG
ATCCAACGGGTCCACCAAGCCGCCGAGAGATCCAGTCGCCCGCCGGACCG
GATTCGAATCGTCGCTGTCAGCAAAACCAAACCGGTCTCAGTAATCCGTC
AGGTTTATGAGGCCGGTCACCGATGTTTCGGTGAAAACTACGTTCAAGAA
ATAGTGGAAAAGGCGGCTCAGCTTCCAGATGATCTAGAATGGCATTTCAT
TGGGAACCTGCAGAGCAATAAAGTGAAACCTTTATTGGCTGGTGTGCCTA
ACCTGGCAATGGTAGAAAGTGTGGACAACGAGAAGATTGCAGGTCGTCTT
AATCGTATGGTTGAAACCATGGGAAGGAAGCCTTTAAAAGTCTTGGTTCA
AGTGAATTACCGTGGAGAAGAATCGAAATCTGGGAGTTGAGCCTTCAGGG
TGGTCGGGGAACTTGGTGAAAGATGGTAAGTCAAAACTGGTCCGAATCTT
GAGTTTTGTGGCCTATTGACCACTTTGGGATGCCAAATTACACATCGGAC
CCCGGAAAAACTTCTAGAACATTAACAGAATGCAGAACTGGAGGGTATGG
ACAGGTCCTTGGGAATACCCGAAGCAGCACTGGGGTTCTGGCCATGGGGA
AGGCTCGGGGGGCTTTCCAACCTGGCATATGGAATGGGGGAGGCAACCGG
GGGGAGGGAATTGGAATCCCCCAAACATTGGGGGGGCGCGGGGAGAAACT
CCCAAAATAAAACAAAACTATTTTTTTTTTCTCCCCCGGGTTCCTGGGAA
AGAGGTGGGCCGCAATGTGGTATCGCAGATGACACTGGCGTCAGGGGCGT
GCGGGACTCAGCGCGGGGAGAGGAAGACGAAAAATATTTCAACATTGAAT
AGATTTAACCTATGAGACCCCACGATGCACGTGGTATACCTATTTCGAGA
CAAGCGCGCCAGGTAGAACC
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