EY679813
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679813 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 310.842 bits (795), Expect = 7.691e-84 Identity = 160/220 (72.73%), Postives = 181/220 (82.27%), Query Frame = 2 Query: 95 FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWG----LPGGLDGEPLKVTELLEGPLG*K*TDPLYPGGSL*SIGFWLMNPKAFAEPQRLGKSRMGRLAMF 736 F GKAV L+PS +E++ G+++MRKTASK+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIW L G ++G + GPLG + DPLYPGGS +G +P+AFAE ++ + + GRLAMF Sbjct: 13 FAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG-----YRVAGGPLG-EVVDPLYPGGSFDPLGL-AEDPEAFAE-LKVKEIKNGRLAMF 224
BLAST of EY679813 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 310.457 bits (794), Expect = 1.004e-83 Identity = 160/220 (72.73%), Postives = 181/220 (82.27%), Query Frame = 2 Query: 95 FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWG----LPGGLDGEPLKVTELLEGPLG*K*TDPLYPGGSL*SIGFWLMNPKAFAEPQRLGKSRMGRLAMF 736 F GKAV L+PS +E++ G+++MRKTASK+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIW L G ++G + GPLG + DPLYPGGS +G +P+AFAE ++ + + GRLAMF Sbjct: 12 FAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG-----YRVAGGPLG-EVVDPLYPGGSFDPLGL-AEDPEAFAE-LKVKEIKNGRLAMF 223
BLAST of EY679813 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 309.301 bits (791), Expect = 2.238e-83 Identity = 159/220 (72.27%), Postives = 180/220 (81.82%), Query Frame = 2 Query: 95 FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWG----LPGGLDGEPLKVTELLEGPLG*K*TDPLYPGGSL*SIGFWLMNPKAFAEPQRLGKSRMGRLAMF 736 F GKAV L+PS +E++ GR++MRKTA+K+ SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIW L G ++G + GPLG + DPLYPGGS +G +P+AFAE ++ + + GRLAMF Sbjct: 13 FAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG-----YRIAGGPLG-EVVDPLYPGGSFDPLGL-ADDPEAFAE-LKVKEIKNGRLAMF 224
BLAST of EY679813 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 3.817e-83 Identity = 157/218 (72.02%), Postives = 177/218 (81.19%), Query Frame = 2 Query: 95 FVGKAVNLAPSGNELSNGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWG----LPGGLDGEPLKVTELLEGPLG*K*TDPLYPGGSL*SIGFWLMNPKAFAEPQRLGKSRMGRLAMF 736 F G+AV L+PS E++ GR+SMRKT +K V+S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIW L G ++G + GPLG + DPLYPGGS +G +P+AFAE ++ + + GRLAMF Sbjct: 13 FAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEG-----YRVAGGPLG-EVVDPLYPGGSFDPLGL-AEDPEAFAE-LKVKEIKNGRLAMF 222
BLAST of EY679813 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1) HSP 1 Score: 308.145 bits (788), Expect = 4.985e-83 Identity = 157/218 (72.02%), Postives = 176/218 (80.73%), Query Frame = 2 Query: 95 FVGKAVNLAPSGNELSNGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWG----LPGGLDGEPLKVTELLEGPLG*K*TDPLYPGGSL*SIGFWLMNPKAFAEPQRLGKSRMGRLAMF 736 F G+AV L+PS +E+S GRI+MRK +KS S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIW L G ++G + GPLG + DPLYPGGS +G +P+AFAE ++ + + GRLAMF Sbjct: 13 FAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG-----YRIAGGPLG-EVVDPLYPGGSFDPLGL-AEDPEAFAE-LKVKEIKNGRLAMF 222
BLAST of EY679813 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 1.894e-82 Identity = 157/220 (71.36%), Postives = 179/220 (81.36%), Query Frame = 2 Query: 95 FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWG----LPGGLDGEPLKVTELLEGPLG*K*TDPLYPGGSL*SIGFWLMNPKAFAEPQRLGKSRMGRLAMF 736 F GKAV L+PS +E++ G+++MRKT +K+ +SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIW L G ++G + GPLG + DPLYPGGS +G +P+AFAE ++ + GRLAMF Sbjct: 13 FAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG-----YRVAGGPLG-EVVDPLYPGGSFDPLGL-AEDPEAFAE-LKVKHIKNGRLAMF 224
BLAST of EY679813 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 1.894e-82 Identity = 158/220 (71.82%), Postives = 180/220 (81.82%), Query Frame = 2 Query: 95 FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWG----LPGGLDGEPLKVTELLEGPLG*K*TDPLYPGGSL*SIGFWLMNPKAFAEPQRLGKSRMGRLAMF 736 F GKAV L+PS +E++ G+++MRKTA+K+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIW L G ++G + PLG + DPLYPGGS +G +P+AFAE ++ + + GRLAMF Sbjct: 12 FAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG-----YRVAGEPLG-EVVDPLYPGGSFDPLGL-AEDPEAFAE-LKVKEIKNGRLAMF 223
BLAST of EY679813 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 1.894e-82 Identity = 156/216 (72.22%), Postives = 177/216 (81.94%), Query Frame = 2 Query: 101 GKAVNLAPSGNELSNGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWG----LPGGLDGEPLKVTELLEGPLG*K*TDPLYPGGSL*SIGFWLMNPKAFAEPQRLGKSRMGRLAMF 736 G+AV L+P+ E+ + +MRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIW L G ++G + GPLG + TDP+YPGGS +G +P+AFAE ++ + + GRLAMF Sbjct: 5 GQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG-----YRIAGGPLG-EVTDPIYPGGSFDPLGL-ADDPEAFAE-LKVKELKNGRLAMF 212
BLAST of EY679813 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 305.449 bits (781), Expect = 3.231e-82 Identity = 158/220 (71.82%), Postives = 178/220 (80.91%), Query Frame = 2 Query: 95 FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWG----LPGGLDGEPLKVTELLEGPLG*K*TDPLYPGGSL*SIGFWLMNPKAFAEPQRLGKSRMGRLAMF 736 F G AV L+PS +E++ G+ MRKT +K+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIW L G ++G + GPLG + TDPLYPGGS +G +P+AFAE ++ + + GRLAMF Sbjct: 13 FAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEG-----YRVAGGPLG-EVTDPLYPGGSFDPLGL-ADDPEAFAE-LKVKEIKNGRLAMF 224
BLAST of EY679813 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 304.679 bits (779), Expect = 5.512e-82 Identity = 159/216 (73.61%), Postives = 176/216 (81.48%), Query Frame = 2 Query: 101 GKAVNLAPSGNELSNGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWG----LPGGLDGEPLKVTELLEGPLG*K*TDPLYPGGSL*SIGFWLMNPKAFAEPQRLGKSRMGRLAMF 736 GKAV L PS E+ GR+SMRKT +K VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIW L G ++G + GPLG + TDP+YPGGS +G +P+AFAE ++ + + GRLAMF Sbjct: 16 GKAVKLGPSAPEV---GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEG-----YRIAGGPLG-EVTDPIYPGGSFDPLGL-ADDPEAFAE-LKVKELKNGRLAMF 220 The following BLAST results are available for this feature:
BLAST of EY679813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY679813 ID=EY679813; Name=EY679813; organism=Citrus sinensis; type=EST; length=994bpback to top |