EY679812

Overview
NameEY679812
Unique NameEY679812
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length991
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY679812 vs. ExPASy Swiss-Prot
Match: NHX7_ARATH (Sodium/hydrogen exchanger 7 OS=Arabidopsis thaliana GN=NHX7 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.064e-38
Identity = 47/75 (62.67%), Postives = 62/75 (82.67%), Query Frame = 3 
Query:  300 LQSDLKRLLRNPPLVKFPKISDLICAHPLLRELPPSVREPLELSTKEIMKLSGMTLYREGSKPSGIWLISNGVVK 524
            +Q+ LK+LLRNPP+VK PK+SD+I +HPL   LPP+  EPL+ S KE MKL G+TLY+EGSKP+G+WLI +G+VK
Sbjct:  713 VQTGLKKLLRNPPIVKLPKLSDMITSHPLSVALPPAFCEPLKHSKKEPMKLRGVTLYKEGSKPTGVWLIFDGIVK 787

HSP 2 Score: 79.7221 bits (195), Expect = 1.064e-38
Identity = 38/45 (84.44%), Postives = 42/45 (93.33%), Query Frame = 1 
Query:   88 QVLHVVKTRQVTYSVLNHLIDYIQNLEKVGLLEEKEMLHLHDAVQ 222
            QVL VVKT+QVTYSVLNHL+ YI+NLEKVGLLEEKE+ HLHDAVQ
Sbjct:  670 QVLRVVKTKQVTYSVLNHLLGYIENLEKVGLLEEKEIAHLHDAVQ 714
[Close]
BLAST of EY679812 vs. ExPASy Swiss-Prot
Match: NHX8_ARATH (Sodium/hydrogen exchanger 8 OS=Arabidopsis thaliana GN=NHX8 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.704e-18
Identity = 34/45 (75.56%), Postives = 38/45 (84.44%), Query Frame = 1 
Query:   88 QVLHVVKTRQVTYSVLNHLIDYIQNLEKVGLLEEKEMLHLHDAVQ 222
            QVL V+KTRQVT+ VLNHL  YI+NLEKVGLLE KE+ HLHD VQ
Sbjct:  668 QVLSVLKTRQVTHYVLNHLNGYIKNLEKVGLLEGKEVSHLHDVVQ 712

HSP 2 Score: 44.2838 bits (103), Expect = 5.704e-18
Identity = 18/32 (56.25%), Postives = 27/32 (84.38%), Query Frame = 3 
Query:  300 LQSDLKRLLRNPPLVKFPKISDLICAHPLLRE 395
            +QSDLK+LLR+PP +K P + DLI ++PLL++
Sbjct:  711 VQSDLKKLLRHPPSLKLPNVDDLITSNPLLKD 742
The following BLAST results are available for this feature:
BLAST of EY679812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
NHX7_ARATH1.064e-3862.67Sodium/hydrogen exchanger 7 OS=Arabidopsis thalian... [more]
NHX8_ARATH5.704e-1875.56Sodium/hydrogen exchanger 8 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-004-C07-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679812 ID=EY679812; Name=EY679812; organism=Citrus sinensis; type=EST; length=991bp
CGGACGCGTGGGCAAAGATGAAAATATCTTTAATATACTCCCTAGCTCAG
AGGATCCTATGCAATATGTTTACCCACTGGACTTTTTCAGGTTTTGCATG
TTGTCAAAACCAGGCAAGTAACTTACTCAGTACTAAACCATTTGATTGAT
TACATCCAAAATCTTGAGAAGGTTGGCTTGTTAGAAGAAAAGGAGATGCT
TCATCTTCATGATGCTGTCCAGGTATCTTTTTTTTGCATTGATCTTCATT
CTATGCACTATACTTTATTTAGTTCTTTGTACAATTTAGTATTATTTTCT
TGCAGTCTGACTTGAAAAGGCTTCTAAGGAATCCTCCTTTAGTGAAGTTT
CCCAAAATAAGTGATTTGATTTGTGCCCATCCCTTGCTAAGGGAGCTTCC
TCCCAGTGTCCGTGAACCACTTGAACTTTCCACAAAAGAAATCATGAAAC
TCAGTGGCATGACACTGTACAGGGAGGGGTCCAAGCCAAGTGGTATCTGG
CTTATATCTAACGGTGTTGTTAAGGTAAATAATGTGTTTACATGGAAAAA
ATTGTATCCCTTCTAAAACTTAAAATGCATTAATAATTTTGATAAATGCA
TATTTAAGATTTAATTTATCTTTTGGTAGGGGACAAACAAAAACATTAAA
AAACAAGCAACTCATTTGCACCCAGTTTTTTACTCCAGGGAAGTACTTTT
GGGGCCCCAATGAGGGGGCAAATGGAAAAACCCTTACATGGAATGAAAGG
GTCCAAAAAATCCATTTGAATAATTGTTTTCTTCAAAAAAACCGGAAAAA
AAAATTTTCAAATTTTTGAAGGTCCAAACTCCCCCCCAAAAAAAGATTCC
CACGGGGGGCAAGAGAACAAATTATTGACATAAAAATTTTAATGTGTCTA
CAAAAACTGGGGAGATTAAAAAACTTTAGAAAAAAGAAAAAAATGGGGTC
ATGTGGGGGCGTTAGACAAAAGAGAAACAATGTGGGTGTAC
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